RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 LOC107984640A0A0U1RRK4 108 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 USP17L23D6RBM5 183 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 M0R378 163 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 TTC32Q5I0X7 151 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 SDIM1Q6ZPB5 146 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 RMI2Q96E14 147 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 C14orf132Q9NPU4 83 aa6.97□□□□□ -1.29
PKP4-206ENST00000452162 EPPK1P58107 5090 aaKnown RBP6.96□□□□□ -1.29
PKP4-206ENST00000452162 DIRC1Q969H9 104 aa6.96□□□□□ -1.29
PKP4-206ENST00000452162 hADV29S1A0JD25 119 aa6.96□□□□□ -1.3
PKP4-206ENST00000452162 TMEM256-PLSCR3K7ERE1 68 aa6.96□□□□□ -1.3
PKP4-206ENST00000452162 RTL8CO15255 209 aa6.96□□□□□ -1.3
PKP4-206ENST00000452162 TLX1NBP0CAT3 122 aa6.96□□□□□ -1.3
PKP4-206ENST00000452162 GAGE2AQ6NT46 116 aa6.96□□□□□ -1.3
PKP4-206ENST00000452162 SMCR5Q8TEV8 140 aa6.96□□□□□ -1.3
PKP4-206ENST00000452162 ZNF73O43830 326 aaPredicted RBP6.95□□□□□ -1.3
PKP4-206ENST00000452162 TRBV7-6A0A0J9YX20 115 aa6.95□□□□□ -1.3
PKP4-206ENST00000452162 C1orf134Q5TEV5 83 aa6.95□□□□□ -1.3
PKP4-206ENST00000452162 Q6Q795 121 aa6.95□□□□□ -1.3
PKP4-206ENST00000452162 GAGE2BQ13066 116 aa6.94□□□□□ -1.3
PKP4-206ENST00000452162 COX7BP24311 80 aa6.93□□□□□ -1.3
PKP4-206ENST00000452162 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
PKP4-206ENST00000452162 JMJD7-PLA2G4BH0Y9G9 81 aa6.93□□□□□ -1.3
PKP4-206ENST00000452162 PKD1P98161 4303 aa6.92□□□□□ -1.3
PKP4-206ENST00000452162 TRBV7-7A0A0K0K1E9 115 aa6.92□□□□□ -1.3
PKP4-206ENST00000452162 SERTAD4-AS1Q5TG53 156 aa6.92□□□□□ -1.3
PKP4-206ENST00000452162 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
PKP4-206ENST00000452162 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
PKP4-206ENST00000452162 DNAH11Q96DT5 4516 aa6.92□□□□□ -1.3
PKP4-206ENST00000452162 J3KT08 172 aa6.91□□□□□ -1.3
PKP4-206ENST00000452162 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
PKP4-206ENST00000452162 Q6ZQY7 126 aa6.91□□□□□ -1.3
PKP4-206ENST00000452162 PKHD1P08F94 4074 aa6.9□□□□□ -1.3
PKP4-206ENST00000452162 CCKP06307 115 aa6.9□□□□□ -1.31
PKP4-206ENST00000452162 IGLV5-37A0A075B6J1 123 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 H3BQ85 93 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 TNP2Q05952 138 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.89□□□□□ -1.31
PKP4-206ENST00000452162 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
PKP4-206ENST00000452162 LINC00336Q6ZUF6 198 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 LINC00528Q8N1L1 170 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 NKAPP1Q8N9T2 125 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 KCNQ1DNQ9H478 68 aa6.89□□□□□ -1.31
PKP4-206ENST00000452162 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
PKP4-206ENST00000452162 KRTAP7-1Q8IUC3 87 aa6.88□□□□□ -1.31
PKP4-206ENST00000452162 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
PKP4-206ENST00000452162 IMUPQ9GZP8 106 aa6.87□□□□□ -1.31
PKP4-206ENST00000452162 A0A1B0GVY2 172 aa6.87□□□□□ -1.31
PKP4-206ENST00000452162 LOC110117498A0A087WWA1 95 aa6.86□□□□□ -1.31
PKP4-206ENST00000452162 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
PKP4-206ENST00000452162 RBM3P98179 157 aaKnown RBP6.86□□□□□ -1.31
PKP4-206ENST00000452162 LAMTOR3Q9UHA4 124 aa6.86□□□□□ -1.31
PKP4-206ENST00000452162 Q6ZQT0 140 aa6.85□□□□□ -1.31
PKP4-206ENST00000452162 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
PKP4-206ENST00000452162 DNAH5Q8TE73 4624 aa6.85□□□□□ -1.31
PKP4-206ENST00000452162 CNBPP62633 177 aaKnown RBP6.84□□□□□ -1.31
PKP4-206ENST00000452162 V9GYY9 64 aa6.84□□□□□ -1.31
PKP4-206ENST00000452162 IGLV1-50A0A075B6I6 118 aa6.84□□□□□ -1.31
PKP4-206ENST00000452162 GHRHP01286 108 aa6.84□□□□□ -1.31
PKP4-206ENST00000452162 Q6JHZ5 121 aa6.84□□□□□ -1.31
PKP4-206ENST00000452162 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
PKP4-206ENST00000452162 KRTAP4-16G5E9R7 235 aaPredicted RBP6.83□□□□□ -1.32
PKP4-206ENST00000452162 PRYO14603 147 aa6.83□□□□□ -1.32
PKP4-206ENST00000452162 SPRR1AP35321 89 aa6.83□□□□□ -1.32
PKP4-206ENST00000452162 RPL37AP8A6NKH3 93 aa6.82□□□□□ -1.32
PKP4-206ENST00000452162 PSCAO43653 123 aa6.82□□□□□ -1.32
PKP4-206ENST00000452162 HRCT1Q6UXD1 115 aa6.82□□□□□ -1.32
PKP4-206ENST00000452162 C4orf26Q17RF5 130 aa6.82□□□□□ -1.32
PKP4-206ENST00000452162 PRO0628Q9UI54 55 aa6.82□□□□□ -1.32
PKP4-206ENST00000452162 MRPL55Q7Z7F7 128 aaKnown RBP6.81□□□□□ -1.32
PKP4-206ENST00000452162 A0A087WTM6 91 aa6.81□□□□□ -1.32
PKP4-206ENST00000452162 Q6ZRX8 168 aa6.81□□□□□ -1.32
PKP4-206ENST00000452162 DSCR8Q96T75 97 aa6.81□□□□□ -1.32
PKP4-206ENST00000452162 LRP1BQ9NZR2 4599 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 A0A096LNI7 61 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 TRBV7-4A0A0J9YYF1 115 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 LRCOL1A6NCL2 159 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 PDE6GP18545 87 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 IGKV3D-7A0A0C4DH55 119 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 C16orf90A8MZG2 172 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 FUSP35637 526 aaKnown RBP eCLIP6.8□□□□□ -1.32
PKP4-206ENST00000452162 C14orf177Q52M58 125 aa6.8□□□□□ -1.32
PKP4-206ENST00000452162 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
PKP4-206ENST00000452162 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
PKP4-206ENST00000452162 Q9BRP9 147 aa6.79□□□□□ -1.32
PKP4-206ENST00000452162 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
PKP4-206ENST00000452162 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
PKP4-206ENST00000452162 LINC01547P58512 204 aaPredicted RBP6.77□□□□□ -1.32
PKP4-206ENST00000452162 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.32
PKP4-206ENST00000452162 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
PKP4-206ENST00000452162 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
PKP4-206ENST00000452162 Q5XG85 94 aa6.77□□□□□ -1.33
PKP4-206ENST00000452162 Q8N377 158 aa6.77□□□□□ -1.33
PKP4-206ENST00000452162 HIST1H4AP62805 103 aaKnown RBP6.76□□□□□ -1.33
PKP4-206ENST00000452162 UBL5Q9BZL1 73 aa6.76□□□□□ -1.33
PKP4-206ENST00000452162 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
PKP4-206ENST00000452162 A0A1W2PNN7 141 aa6.76□□□□□ -1.33
PKP4-206ENST00000452162 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms