RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 Q5XG85 94 aa9.19□□□□□ -0.94
RAPGEF3-205ENST00000449771 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
RAPGEF3-205ENST00000449771 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
RAPGEF3-205ENST00000449771 UQCR11O14957 56 aa9.16□□□□□ -0.94
RAPGEF3-205ENST00000449771 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
RAPGEF3-205ENST00000449771 ZNF462Q96JM2 2506 aa9.16□□□□□ -0.94
RAPGEF3-205ENST00000449771 ANAPC11Q9NYG5 84 aa9.16□□□□□ -0.94
RAPGEF3-205ENST00000449771 GIG44P09565 113 aaPredicted RBP9.15□□□□□ -0.94
RAPGEF3-205ENST00000449771 APLNQ9ULZ1 77 aa9.15□□□□□ -0.94
RAPGEF3-205ENST00000449771 MIR22HGQ0VDD5 57 aa9.15□□□□□ -0.94
RAPGEF3-205ENST00000449771 CDC42SE1Q9NRR8 79 aa9.15□□□□□ -0.95
RAPGEF3-205ENST00000449771 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
RAPGEF3-205ENST00000449771 IGLV7-43P04211 117 aa9.14□□□□□ -0.95
RAPGEF3-205ENST00000449771 USP9XQ93008 2570 aaPredicted RBP9.14□□□□□ -0.95
RAPGEF3-205ENST00000449771 C9orf163Q8N9P6 203 aa9.14□□□□□ -0.95
RAPGEF3-205ENST00000449771 TLN2Q9Y4G6 2542 aa9.13□□□□□ -0.95
RAPGEF3-205ENST00000449771 A0A0G2JQZ4 141 aa9.13□□□□□ -0.95
RAPGEF3-205ENST00000449771 A0A1W2PNN7 141 aa9.13□□□□□ -0.95
RAPGEF3-205ENST00000449771 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
RAPGEF3-205ENST00000449771 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
RAPGEF3-205ENST00000449771 Q1T7F1 81 aa9.11□□□□□ -0.95
RAPGEF3-205ENST00000449771 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
RAPGEF3-205ENST00000449771 Q8N377 158 aa9.11□□□□□ -0.95
RAPGEF3-205ENST00000449771 LINC00612Q8N6U2 182 aa9.11□□□□□ -0.95
RAPGEF3-205ENST00000449771 PLA2G2DQ9UNK4 145 aa9.11□□□□□ -0.95
RAPGEF3-205ENST00000449771 WDR87Q6ZQQ6 2873 aa9.1□□□□□ -0.95
RAPGEF3-205ENST00000449771 PSORS1C2Q9UIG4 136 aa9.1□□□□□ -0.95
RAPGEF3-205ENST00000449771 EIF4EBP3O60516 100 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF3-205ENST00000449771 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
RAPGEF3-205ENST00000449771 ZNF575Q86XF7 245 aa9.07□□□□□ -0.96
RAPGEF3-205ENST00000449771 KRTAP1-3Q8IUG1 177 aa9.05□□□□□ -0.96
RAPGEF3-205ENST00000449771 SPRR4Q96PI1 79 aa9.04□□□□□ -0.96
RAPGEF3-205ENST00000449771 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
RAPGEF3-205ENST00000449771 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
RAPGEF3-205ENST00000449771 ANKRD17O75179 2603 aaKnown RBP9.03□□□□□ -0.96
RAPGEF3-205ENST00000449771 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
RAPGEF3-205ENST00000449771 LINC01554Q52M75 96 aa8.99□□□□□ -0.97
RAPGEF3-205ENST00000449771 SETD2Q9BYW2 2564 aaPredicted RBP8.99□□□□□ -0.97
RAPGEF3-205ENST00000449771 KRTAP1-1Q07627 177 aa8.99□□□□□ -0.97
RAPGEF3-205ENST00000449771 FAM229BQ4G0N7 80 aa8.98□□□□□ -0.97
RAPGEF3-205ENST00000449771 FP248Q71RG6 208 aaPredicted RBP8.98□□□□□ -0.97
RAPGEF3-205ENST00000449771 SPANXA2-OT1Q8N9U9 137 aa8.98□□□□□ -0.97
RAPGEF3-205ENST00000449771 USP9YO00507 2555 aaPredicted RBP8.97□□□□□ -0.97
RAPGEF3-205ENST00000449771 GOLGB1Q14789 3259 aaKnown RBP8.97□□□□□ -0.97
RAPGEF3-205ENST00000449771 CYSTM1Q9H1C7 97 aa8.96□□□□□ -0.97
RAPGEF3-205ENST00000449771 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.98
RAPGEF3-205ENST00000449771 PKD1L2Q7Z442 2459 aa8.95□□□□□ -0.98
RAPGEF3-205ENST00000449771 TNP2Q05952 138 aa8.94□□□□□ -0.98
RAPGEF3-205ENST00000449771 Q8N1X5 172 aa8.94□□□□□ -0.98
RAPGEF3-205ENST00000449771 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
RAPGEF3-205ENST00000449771 A0A0D9SG42 100 aa8.92□□□□□ -0.98
RAPGEF3-205ENST00000449771 Q75L30 129 aa8.92□□□□□ -0.98
RAPGEF3-205ENST00000449771 SPTBN4Q9H254 2564 aa8.92□□□□□ -0.98
RAPGEF3-205ENST00000449771 MTORP42345 2549 aa8.91□□□□□ -0.98
RAPGEF3-205ENST00000449771 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
RAPGEF3-205ENST00000449771 Q6ZSA8 131 aa8.9□□□□□ -0.98
RAPGEF3-205ENST00000449771 POLQO75417 2590 aa8.9□□□□□ -0.99
RAPGEF3-205ENST00000449771 OCR1Q9BZK8 76 aa8.89□□□□□ -0.99
RAPGEF3-205ENST00000449771 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
RAPGEF3-205ENST00000449771 PRAC1Q96KF2 57 aa8.89□□□□□ -0.99
RAPGEF3-205ENST00000449771 OXTP01178 125 aa8.88□□□□□ -0.99
RAPGEF3-205ENST00000449771 CENPFP49454 3210 aa8.87□□□□□ -0.99
RAPGEF3-205ENST00000449771 ACANP16112 2415 aa8.87□□□□□ -0.99
RAPGEF3-205ENST00000449771 IGLV7-46A0A075B6I9 117 aa8.86□□□□□ -0.99
RAPGEF3-205ENST00000449771 F8P00451 2351 aa8.85□□□□□ -0.99
RAPGEF3-205ENST00000449771 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
RAPGEF3-205ENST00000449771 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
RAPGEF3-205ENST00000449771 FASNP49327 2511 aaKnown RBP8.82□□□□□ -1
RAPGEF3-205ENST00000449771 M0R2T5 61 aa8.82□□□□□ -1
RAPGEF3-205ENST00000449771 Q5VV11 94 aa8.8□□□□□ -1
RAPGEF3-205ENST00000449771 Q8N9P0 234 aaPredicted RBP8.77□□□□□ -1
RAPGEF3-205ENST00000449771 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
RAPGEF3-205ENST00000449771 CSAG1Q6PB30 78 aa8.73□□□□□ -1.01
RAPGEF3-205ENST00000449771 UTRNP46939 3433 aa8.73□□□□□ -1.01
RAPGEF3-205ENST00000449771 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.02
RAPGEF3-205ENST00000449771 PLAC8Q9NZF1 115 aa8.68□□□□□ -1.02
RAPGEF3-205ENST00000449771 LUZP6Q538Z0 58 aa8.68□□□□□ -1.02
RAPGEF3-205ENST00000449771 HRES1P13985 223 aa8.64□□□□□ -1.03
RAPGEF3-205ENST00000449771 SPINK7P58062 85 aa8.64□□□□□ -1.03
RAPGEF3-205ENST00000449771 ZCCHC13Q8WW36 166 aaKnown RBP8.63□□□□□ -1.03
RAPGEF3-205ENST00000449771 S4R3F8 94 aa8.62□□□□□ -1.03
RAPGEF3-205ENST00000449771 A0A1B0GU33 70 aa8.61□□□□□ -1.03
RAPGEF3-205ENST00000449771 LINC00483Q53H64 154 aa8.58□□□□□ -1.04
RAPGEF3-205ENST00000449771 Q5VSD8 79 aa8.58□□□□□ -1.04
RAPGEF3-205ENST00000449771 HECTD1Q9ULT8 2610 aa8.57□□□□□ -1.04
RAPGEF3-205ENST00000449771 DMAC1Q96GE9 116 aa8.57□□□□□ -1.04
RAPGEF3-205ENST00000449771 EPG5Q9HCE0 2579 aa8.57□□□□□ -1.04
RAPGEF3-205ENST00000449771 A0A0A0MQY5 61 aa8.55□□□□□ -1.04
RAPGEF3-205ENST00000449771 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
RAPGEF3-205ENST00000449771 CR1P17927 2039 aa8.53□□□□□ -1.04
RAPGEF3-205ENST00000449771 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
RAPGEF3-205ENST00000449771 SPRR1AP35321 89 aa8.51□□□□□ -1.05
RAPGEF3-205ENST00000449771 Q8NDZ9 215 aa8.5□□□□□ -1.05
RAPGEF3-205ENST00000449771 LCE6AA0A183 80 aa8.5□□□□□ -1.05
RAPGEF3-205ENST00000449771 KRTAP1-5Q9BYS1 174 aa8.48□□□□□ -1.05
RAPGEF3-205ENST00000449771 Q5W150 140 aa8.48□□□□□ -1.05
RAPGEF3-205ENST00000449771 MGAM2Q2M2H8 2515 aa8.47□□□□□ -1.05
RAPGEF3-205ENST00000449771 KRTAP10-1P60331 282 aa8.47□□□□□ -1.05
RAPGEF3-205ENST00000449771 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
RAPGEF3-205ENST00000449771 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms