RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	MAST4	O15021	2626 aa		11.04	□□□□□ -0.64
TOM1-210	ENST00000449058	NKAPP1	Q8N9T2	125 aa		11.03	□□□□□ -0.64
TOM1-210	ENST00000449058	C7orf33	Q8WU49	177 aa		11.03	□□□□□ -0.64
TOM1-210	ENST00000449058	PLA2G2D	Q9UNK4	145 aa		11.02	□□□□□ -0.65
TOM1-210	ENST00000449058	CYSTM1	Q9H1C7	97 aa		11.02	□□□□□ -0.65
TOM1-210	ENST00000449058	CXCL6	P80162	114 aa		11.01	□□□□□ -0.65
TOM1-210	ENST00000449058	HAMP	P81172	84 aa		11.01	□□□□□ -0.65
TOM1-210	ENST00000449058	TM2D3	Q9BRN9	247 aa		11.01	□□□□□ -0.65
TOM1-210	ENST00000449058	MRAP	Q8TCY5	172 aa		11	□□□□□ -0.65
TOM1-210	ENST00000449058	CASC10	Q5T4H9	136 aa		10.99	□□□□□ -0.65
TOM1-210	ENST00000449058	IGLV5-37	A0A075B6J1	123 aa		10.97	□□□□□ -0.65
TOM1-210	ENST00000449058	BCE1	O60756	84 aa		10.97	□□□□□ -0.65
TOM1-210	ENST00000449058	PRB2	P02812	416 aa	Predicted RBP	10.97	□□□□□ -0.65
TOM1-210	ENST00000449058	NOTCH1	P46531	2555 aa		10.96	□□□□□ -0.66
TOM1-210	ENST00000449058	RPS28	P62857	69 aa	Known RBP	10.95	□□□□□ -0.66
TOM1-210	ENST00000449058	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.95	□□□□□ -0.66
TOM1-210	ENST00000449058	RMI2	Q96E14	147 aa		10.95	□□□□□ -0.66
TOM1-210	ENST00000449058	FAM168B	A1KXE4	195 aa		10.94	□□□□□ -0.66
TOM1-210	ENST00000449058		K7EIL1	84 aa		10.94	□□□□□ -0.66
TOM1-210	ENST00000449058		Q8N377	158 aa		10.94	□□□□□ -0.66
TOM1-210	ENST00000449058	IGLV1-50	A0A075B6I6	118 aa		10.93	□□□□□ -0.66
TOM1-210	ENST00000449058	PRY	O14603	147 aa		10.93	□□□□□ -0.66
TOM1-210	ENST00000449058	SPRR1A	P35321	89 aa		10.93	□□□□□ -0.66
TOM1-210	ENST00000449058		Q6ZRX8	168 aa		10.93	□□□□□ -0.66
TOM1-210	ENST00000449058	KRTAP7-1	Q8IUC3	87 aa		10.93	□□□□□ -0.66
TOM1-210	ENST00000449058	DNAH1	Q9P2D7	4330 aa		10.93	□□□□□ -0.66
TOM1-210	ENST00000449058	DHRS4-AS1	Q9P1J3	65 aa		10.92	□□□□□ -0.66
TOM1-210	ENST00000449058	RPL37AP8	A6NKH3	93 aa		10.91	□□□□□ -0.66
TOM1-210	ENST00000449058	TMEM258	P61165	79 aa		10.91	□□□□□ -0.66
TOM1-210	ENST00000449058	IGLV5-48	A0A075B6I7	105 aa		10.9	□□□□□ -0.66
TOM1-210	ENST00000449058		Q9BRP9	147 aa		10.9	□□□□□ -0.66
TOM1-210	ENST00000449058	TRAV7	A0A075B6U4	112 aa		10.89	□□□□□ -0.67
TOM1-210	ENST00000449058	DEFB105A	Q8NG35	78 aa		10.89	□□□□□ -0.67
TOM1-210	ENST00000449058	SCX	Q7RTU7	201 aa		10.89	□□□□□ -0.67
TOM1-210	ENST00000449058	NBEAL1	Q6ZS30	2694 aa		10.88	□□□□□ -0.67
TOM1-210	ENST00000449058	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.87	□□□□□ -0.67
TOM1-210	ENST00000449058	ETDC	A0A1B0GVM5	59 aa		10.87	□□□□□ -0.67
TOM1-210	ENST00000449058	MRPL55	Q7Z7F7	128 aa	Known RBP	10.85	□□□□□ -0.67
TOM1-210	ENST00000449058	C20orf197	Q8N268	126 aa		10.84	□□□□□ -0.67
TOM1-210	ENST00000449058	COL6A5	A8TX70	2615 aa		10.83	□□□□□ -0.68
TOM1-210	ENST00000449058	TNP2	Q05952	138 aa		10.83	□□□□□ -0.68
TOM1-210	ENST00000449058	NREP	Q16612	68 aa		10.83	□□□□□ -0.68
TOM1-210	ENST00000449058	HRCT1	Q6UXD1	115 aa		10.82	□□□□□ -0.68
TOM1-210	ENST00000449058	ST20-AS1	Q8NBB2	130 aa		10.82	□□□□□ -0.68
TOM1-210	ENST00000449058	DPH3	Q96FX2	82 aa		10.82	□□□□□ -0.68
TOM1-210	ENST00000449058	C4orf26	Q17RF5	130 aa		10.81	□□□□□ -0.68
TOM1-210	ENST00000449058		A0A1B0GW54	56 aa		10.81	□□□□□ -0.68
TOM1-210	ENST00000449058	C3orf84	H3BNL1	204 aa		10.81	□□□□□ -0.68
TOM1-210	ENST00000449058	ERC2-IT1	O76042	136 aa		10.8	□□□□□ -0.68
TOM1-210	ENST00000449058	IGKV4-1	P06312	121 aa		10.8	□□□□□ -0.68
TOM1-210	ENST00000449058	KRTAP1-5	Q9BYS1	174 aa		10.8	□□□□□ -0.68
TOM1-210	ENST00000449058		A0A1W2PNM2	257 aa		10.79	□□□□□ -0.68
TOM1-210	ENST00000449058	REG3G	Q6UW15	175 aa		10.78	□□□□□ -0.68
TOM1-210	ENST00000449058	FUS	P35637	526 aa	Known RBP eCLIP	10.77	□□□□□ -0.68
TOM1-210	ENST00000449058	KLKP1	Q107X0	134 aa		10.77	□□□□□ -0.68
TOM1-210	ENST00000449058		Q8N9L7	120 aa		10.77	□□□□□ -0.68
TOM1-210	ENST00000449058	C1orf137	Q5JT78	98 aa		10.77	□□□□□ -0.69
TOM1-210	ENST00000449058	BPY2	O14599	106 aa		10.76	□□□□□ -0.69
TOM1-210	ENST00000449058	CNBP	P62633	177 aa	Known RBP	10.76	□□□□□ -0.69
TOM1-210	ENST00000449058	UBE2B	P63146	152 aa		10.76	□□□□□ -0.69
TOM1-210	ENST00000449058		Q8NBF4	154 aa		10.75	□□□□□ -0.69
TOM1-210	ENST00000449058	PRO0628	Q9UI54	55 aa		10.75	□□□□□ -0.69
TOM1-210	ENST00000449058		A0A096LNI7	61 aa		10.74	□□□□□ -0.69
TOM1-210	ENST00000449058	C16orf90	A8MZG2	172 aa		10.74	□□□□□ -0.69
TOM1-210	ENST00000449058		H7BZZ5	65 aa		10.74	□□□□□ -0.69
TOM1-210	ENST00000449058	SEC61G	P60059	68 aa		10.74	□□□□□ -0.69
TOM1-210	ENST00000449058	SPRR4	Q96PI1	79 aa		10.73	□□□□□ -0.69
TOM1-210	ENST00000449058		Q5XG85	94 aa		10.73	□□□□□ -0.69
TOM1-210	ENST00000449058	SMIM29	Q86T20	159 aa		10.72	□□□□□ -0.69
TOM1-210	ENST00000449058		A0A1W2PNN7	141 aa		10.7	□□□□□ -0.7
TOM1-210	ENST00000449058	OXT	P01178	125 aa		10.7	□□□□□ -0.7
TOM1-210	ENST00000449058	APLN	Q9ULZ1	77 aa		10.7	□□□□□ -0.7
TOM1-210	ENST00000449058	SNURF	Q9Y675	71 aa		10.7	□□□□□ -0.7
TOM1-210	ENST00000449058	COL7A1	Q02388	2944 aa		10.7	□□□□□ -0.7
TOM1-210	ENST00000449058	IGKV2-24	A0A0C4DH68	120 aa		10.69	□□□□□ -0.7
TOM1-210	ENST00000449058	PSCA	O43653	123 aa		10.69	□□□□□ -0.7
TOM1-210	ENST00000449058	FAM236D	A0A1B0GTK5	79 aa		10.68	□□□□□ -0.7
TOM1-210	ENST00000449058	FAM236C	P0DP71	79 aa		10.68	□□□□□ -0.7
TOM1-210	ENST00000449058	STAB2	Q8WWQ8	2551 aa		10.68	□□□□□ -0.7
TOM1-210	ENST00000449058	UBE2DNL	Q8IWF7	75 aa		10.67	□□□□□ -0.7
TOM1-210	ENST00000449058	OCR1	Q9BZK8	76 aa		10.67	□□□□□ -0.7
TOM1-210	ENST00000449058	MGAM2	Q2M2H8	2515 aa		10.67	□□□□□ -0.7
TOM1-210	ENST00000449058	DNAH10	Q8IVF4	4471 aa		10.67	□□□□□ -0.7
TOM1-210	ENST00000449058	LINC00476	Q8WZB0	136 aa		10.66	□□□□□ -0.7
TOM1-210	ENST00000449058	C14orf177	Q52M58	125 aa		10.65	□□□□□ -0.7
TOM1-210	ENST00000449058	MDFI	Q99750	246 aa		10.65	□□□□□ -0.7
TOM1-210	ENST00000449058	PRLH	P81277	87 aa		10.65	□□□□□ -0.71
TOM1-210	ENST00000449058		V9GYY9	64 aa		10.65	□□□□□ -0.71
TOM1-210	ENST00000449058	NDUFC1	O43677	76 aa		10.64	□□□□□ -0.71
TOM1-210	ENST00000449058	PKIG	Q9Y2B9	76 aa		10.64	□□□□□ -0.71
TOM1-210	ENST00000449058	DNAH9	Q9NYC9	4486 aa		10.64	□□□□□ -0.71
TOM1-210	ENST00000449058	TMEM254	Q8TBM7	123 aa		10.63	□□□□□ -0.71
TOM1-210	ENST00000449058		F8WEM9	126 aa		10.63	□□□□□ -0.71
TOM1-210	ENST00000449058	LYST	Q99698	3801 aa		10.63	□□□□□ -0.71
TOM1-210	ENST00000449058	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.62	□□□□□ -0.71
TOM1-210	ENST00000449058	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.62	□□□□□ -0.71
TOM1-210	ENST00000449058	IGLV8-61	A0A075B6I0	122 aa		10.61	□□□□□ -0.71
TOM1-210	ENST00000449058	DSCR10	P59022	87 aa		10.61	□□□□□ -0.71
TOM1-210	ENST00000449058	IGFL1	Q6UW32	110 aa		10.61	□□□□□ -0.71
TOM1-210	ENST00000449058	EPM2A	B3EWF7	344 aa		10.6	□□□□□ -0.71

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