RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 IGKV2D-28P01615 120 aa4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 RPL37AP61513 92 aaKnown RBP4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 C12orf57Q99622 126 aa4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 PSORS1C2Q9UIG4 136 aa4.67□□□□□ -1.66
AC004540.1-206ENST00000448056 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
AC004540.1-206ENST00000448056 Q5VSD8 79 aa4.66□□□□□ -1.66
AC004540.1-206ENST00000448056 LINC00518Q8N0U6 118 aa4.66□□□□□ -1.66
AC004540.1-206ENST00000448056 PRO1933Q9H354 126 aa4.66□□□□□ -1.66
AC004540.1-206ENST00000448056 FAT1Q14517 4588 aa4.66□□□□□ -1.66
AC004540.1-206ENST00000448056 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.66
AC004540.1-206ENST00000448056 IGLV6-57P01721 117 aa4.65□□□□□ -1.67
AC004540.1-206ENST00000448056 TAL2Q16559 108 aa4.65□□□□□ -1.67
AC004540.1-206ENST00000448056 KCNQ1DNQ9H478 68 aa4.65□□□□□ -1.67
AC004540.1-206ENST00000448056 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.67
AC004540.1-206ENST00000448056 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.67
AC004540.1-206ENST00000448056 TRBV10-3A0A0K0K1G6 114 aa4.64□□□□□ -1.67
AC004540.1-206ENST00000448056 A4D1N5 150 aa4.64□□□□□ -1.67
AC004540.1-206ENST00000448056 DDTP30046 118 aa4.64□□□□□ -1.67
AC004540.1-206ENST00000448056 C1orf137Q5JT78 98 aa4.64□□□□□ -1.67
AC004540.1-206ENST00000448056 S100A7L2Q5SY68 101 aa4.64□□□□□ -1.67
AC004540.1-206ENST00000448056 LINC00337Q8N6G1 96 aa4.64□□□□□ -1.67
AC004540.1-206ENST00000448056 KRTAP4-5Q9BYR2 181 aa4.64□□□□□ -1.67
AC004540.1-206ENST00000448056 REG3GQ6UW15 175 aa4.63□□□□□ -1.67
AC004540.1-206ENST00000448056 CEND1Q8N111 149 aa4.63□□□□□ -1.67
AC004540.1-206ENST00000448056 OR13C6PQ8NH95 151 aa4.63□□□□□ -1.67
AC004540.1-206ENST00000448056 TMEM126AQ9H061 195 aa4.63□□□□□ -1.67
AC004540.1-206ENST00000448056 TRAV13-2A0A0B4J235 113 aa4.62□□□□□ -1.67
AC004540.1-206ENST00000448056 A6NDN8 102 aa4.62□□□□□ -1.67
AC004540.1-206ENST00000448056 PRYO14603 147 aa4.62□□□□□ -1.67
AC004540.1-206ENST00000448056 BCE1O60756 84 aa4.62□□□□□ -1.67
AC004540.1-206ENST00000448056 IGLV7-43P04211 117 aa4.62□□□□□ -1.67
AC004540.1-206ENST00000448056 HNRNPA3P51991 378 aaKnown RBP4.62□□□□□ -1.67
AC004540.1-206ENST00000448056 HSD52Q0P140 79 aa4.62□□□□□ -1.67
AC004540.1-206ENST00000448056 TRAV23DV6A0A075B6W5 121 aa4.61□□□□□ -1.67
AC004540.1-206ENST00000448056 TSTD3H0UI37 97 aa4.61□□□□□ -1.67
AC004540.1-206ENST00000448056 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
AC004540.1-206ENST00000448056 CFC1P0CG37 223 aa4.61□□□□□ -1.67
AC004540.1-206ENST00000448056 SPRR1AP35321 89 aa4.61□□□□□ -1.67
AC004540.1-206ENST00000448056 CBY1Q9Y3M2 126 aa4.61□□□□□ -1.67
AC004540.1-206ENST00000448056 KRTAP4-16G5E9R7 235 aaPredicted RBP4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 ZNF73O43830 326 aaPredicted RBP4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 ZNF861PO60384 105 aa4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 FXYD2P54710 66 aa4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 CTAG1AP78358 180 aa4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 SPINK6Q6UWN8 80 aa4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 FAM19A1Q7Z5A9 133 aa4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
AC004540.1-206ENST00000448056 A0A0B4J2C4 111 aa4.59□□□□□ -1.67
AC004540.1-206ENST00000448056 H0Y9J4 135 aa4.59□□□□□ -1.67
AC004540.1-206ENST00000448056 RPL28P46779 137 aaKnown RBP4.59□□□□□ -1.67
AC004540.1-206ENST00000448056 UBE2AP49459 152 aa4.59□□□□□ -1.67
AC004540.1-206ENST00000448056 BVES-AS1Q5T3Y7 98 aa4.59□□□□□ -1.67
AC004540.1-206ENST00000448056 LCE5AQ5TCM9 118 aa4.59□□□□□ -1.67
AC004540.1-206ENST00000448056 KRTAP13-1Q8IUC0 172 aa4.59□□□□□ -1.67
AC004540.1-206ENST00000448056 ETDCA0A1B0GVM5 59 aa4.58□□□□□ -1.68
AC004540.1-206ENST00000448056 INAFM2P0DMQ5 153 aa4.58□□□□□ -1.68
AC004540.1-206ENST00000448056 PRLHP81277 87 aa4.58□□□□□ -1.68
AC004540.1-206ENST00000448056 SMIM11BQ8TCY0 68 aa4.58□□□□□ -1.68
AC004540.1-206ENST00000448056 RAB37Q96AX2 223 aa4.58□□□□□ -1.68
AC004540.1-206ENST00000448056 A0A1B0GWB2 263 aa4.57□□□□□ -1.68
AC004540.1-206ENST00000448056 RPL13AP40429 203 aaKnown RBP4.57□□□□□ -1.68
AC004540.1-206ENST00000448056 HINT1P49773 126 aaPredicted RBP4.57□□□□□ -1.68
AC004540.1-206ENST00000448056 C6orf99Q4VX62 202 aa4.57□□□□□ -1.68
AC004540.1-206ENST00000448056 DIRC1Q969H9 104 aa4.57□□□□□ -1.68
AC004540.1-206ENST00000448056 NHP2Q9NX24 153 aaKnown RBP4.57□□□□□ -1.68
AC004540.1-206ENST00000448056 PRO1854Q9UHT4 67 aa4.57□□□□□ -1.68
AC004540.1-206ENST00000448056 TRBV7-6A0A0J9YX20 115 aa4.56□□□□□ -1.68
AC004540.1-206ENST00000448056 M0R143 59 aa4.56□□□□□ -1.68
AC004540.1-206ENST00000448056 Q6ZRX8 168 aa4.56□□□□□ -1.68
AC004540.1-206ENST00000448056 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
AC004540.1-206ENST00000448056 ABCA13Q86UQ4 5058 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 H7C2G1 150 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 K7ERJ3 54 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 TRIAP1O43715 76 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 COX7BP24311 80 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 ELOF1P60002 83 aaKnown RBP4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 VAMP3Q15836 100 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 SMCR5Q8TEV8 140 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 Q9BRP9 147 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 HIGD2AQ9BW72 106 aa4.55□□□□□ -1.68
AC004540.1-206ENST00000448056 ERC2-IT1O76042 136 aa4.53□□□□□ -1.68
AC004540.1-206ENST00000448056 Q1RN00 199 aa4.53□□□□□ -1.68
AC004540.1-206ENST00000448056 DHRS4-AS1Q9P1J3 65 aa4.53□□□□□ -1.68
AC004540.1-206ENST00000448056 FLG2Q5D862 2391 aaPredicted RBP4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 H0YGX0 51 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 TSPAN13O95857 204 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 OXTP01178 125 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 KRTAP1-4P0C5Y4 121 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 BATFQ16520 125 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 LINC01600Q96MT4 127 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 ANAPC11Q9NYG5 84 aa4.51□□□□□ -1.69
AC004540.1-206ENST00000448056 hADV29S1A0JD25 119 aa4.5□□□□□ -1.69
AC004540.1-206ENST00000448056 KRTAP29-1A8MX34 341 aaPredicted RBP4.5□□□□□ -1.69
AC004540.1-206ENST00000448056 SLC25A20O43772 301 aa4.5□□□□□ -1.69
AC004540.1-206ENST00000448056 PSMB2P49721 201 aa4.5□□□□□ -1.69
AC004540.1-206ENST00000448056 ST20-AS1Q8NBB2 130 aa4.5□□□□□ -1.69
AC004540.1-206ENST00000448056 SPRR4Q96PI1 79 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms