RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 ZNF292O60281 2723 aa0.82□□□□□ -2.28
PMS1-216ENST00000447734 RALGAPBQ86X10 1494 aa0.82□□□□□ -2.28
PMS1-216ENST00000447734 PRH1P02810 166 aa0.82□□□□□ -2.28
PMS1-216ENST00000447734 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
PMS1-216ENST00000447734 SPTBN1Q01082 2364 aaKnown RBP0.82□□□□□ -2.28
PMS1-216ENST00000447734 NHSQ6T4R5 1651 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 TNRC6CQ9HCJ0 1690 aaKnown RBP0.81□□□□□ -2.28
PMS1-216ENST00000447734 TNCP24821 2201 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 NDUFA3O95167 84 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 SPINK1P00995 79 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 KRTAP2-3P0C7H8 128 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 KRTAP2-4Q9BYR9 128 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 UBL5Q9BZL1 73 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 NESP48681 1621 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 FRAS1Q86XX4 4008 aa0.81□□□□□ -2.28
PMS1-216ENST00000447734 LELP1Q5T871 98 aa0.8□□□□□ -2.28
PMS1-216ENST00000447734 TPRP12270 2363 aaKnown RBP0.8□□□□□ -2.28
PMS1-216ENST00000447734 SMR3AQ99954 134 aa0.79□□□□□ -2.28
PMS1-216ENST00000447734 APCP25054 2843 aa0.79□□□□□ -2.28
PMS1-216ENST00000447734 CHD9Q3L8U1 2897 aa0.79□□□□□ -2.28
PMS1-216ENST00000447734 CNOT1A5YKK6 2376 aaKnown RBP0.79□□□□□ -2.28
PMS1-216ENST00000447734 CCDC180Q9P1Z9 1646 aa0.78□□□□□ -2.28
PMS1-216ENST00000447734 PKDREJQ9NTG1 2253 aa0.78□□□□□ -2.28
PMS1-216ENST00000447734 DDX60LQ5H9U9 1706 aaKnown RBP0.78□□□□□ -2.28
PMS1-216ENST00000447734 NRAPQ86VF7 1730 aa0.78□□□□□ -2.28
PMS1-216ENST00000447734 WFDC13Q8IUB5 93 aa0.78□□□□□ -2.28
PMS1-216ENST00000447734 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
PMS1-216ENST00000447734 LINC01549A6NIU2 74 aa0.77□□□□□ -2.29
PMS1-216ENST00000447734 MRPL33O75394 65 aaKnown RBP0.77□□□□□ -2.29
PMS1-216ENST00000447734 SFTA3P0C7M3 94 aa0.77□□□□□ -2.29
PMS1-216ENST00000447734 PRO3102Q9H379 93 aa0.77□□□□□ -2.29
PMS1-216ENST00000447734 KCNQ1DNQ9H478 68 aa0.77□□□□□ -2.29
PMS1-216ENST00000447734 ZNF469Q96JG9 3925 aaPredicted RBP0.76□□□□□ -2.29
PMS1-216ENST00000447734 DEFB131BA0A096LNP1 70 aa0.76□□□□□ -2.29
PMS1-216ENST00000447734 SMIM5Q71RC9 77 aa0.76□□□□□ -2.29
PMS1-216ENST00000447734 AKAP6Q13023 2319 aa0.75□□□□□ -2.29
PMS1-216ENST00000447734 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
PMS1-216ENST00000447734 PIEZO1Q92508 2521 aa0.74□□□□□ -2.29
PMS1-216ENST00000447734 LINC00158P58513 81 aa0.74□□□□□ -2.29
PMS1-216ENST00000447734 U3KQA8 63 aa0.74□□□□□ -2.29
PMS1-216ENST00000447734 TJP1Q07157 1748 aa0.74□□□□□ -2.29
PMS1-216ENST00000447734 GVINP1Q7Z2Y8 2422 aa0.74□□□□□ -2.29
PMS1-216ENST00000447734 ETDCA0A1B0GVM5 59 aa0.73□□□□□ -2.29
PMS1-216ENST00000447734 C4AP0C0L4 1744 aa0.72□□□□□ -2.29
PMS1-216ENST00000447734 C4BP0C0L5 1744 aa0.72□□□□□ -2.29
PMS1-216ENST00000447734 TIAM1Q13009 1591 aa0.71□□□□□ -2.3
PMS1-216ENST00000447734 ANK2Q01484 3957 aa0.71□□□□□ -2.3
PMS1-216ENST00000447734 ABCA6Q8N139 1617 aa0.71□□□□□ -2.3
PMS1-216ENST00000447734 CRIP1P50238 77 aa0.7□□□□□ -2.3
PMS1-216ENST00000447734 DEFB114Q30KQ6 69 aa0.7□□□□□ -2.3
PMS1-216ENST00000447734 RNF17Q9BXT8 1623 aaKnown RBP0.68□□□□□ -2.3
PMS1-216ENST00000447734 THOC2Q8NI27 1593 aaKnown RBP0.67□□□□□ -2.3
PMS1-216ENST00000447734 LOC730098B7Z3J9 87 aa0.67□□□□□ -2.3
PMS1-216ENST00000447734 H0YAA0 97 aa0.67□□□□□ -2.3
PMS1-216ENST00000447734 IGF2RP11717 2491 aa0.67□□□□□ -2.3
PMS1-216ENST00000447734 CSMD3Q7Z407 3707 aa0.67□□□□□ -2.3
PMS1-216ENST00000447734 FCER1GP30273 86 aa0.66□□□□□ -2.3
PMS1-216ENST00000447734 DEPDC5O75140 1603 aa0.66□□□□□ -2.3
PMS1-216ENST00000447734 ABCC6O95255 1503 aa0.65□□□□□ -2.31
PMS1-216ENST00000447734 ABCA10Q8WWZ4 1543 aa0.65□□□□□ -2.31
PMS1-216ENST00000447734 AHNAKQ09666 5890 aaKnown RBP0.65□□□□□ -2.31
PMS1-216ENST00000447734 EEA1Q15075 1411 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 TENM4Q6N022 2769 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 VWFP04275 2813 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 LYNX1G3V0Z9 82 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 NCBP2-AS2Q69YL0 99 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 PLXNC1O60486 1568 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 GLI2P10070 1586 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 C3P01024 1663 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 CSPG4Q6UVK1 2322 aa0.64□□□□□ -2.31
PMS1-216ENST00000447734 ALS2Q96Q42 1657 aa0.63□□□□□ -2.31
PMS1-216ENST00000447734 PRXQ9BXM0 1461 aa0.63□□□□□ -2.31
PMS1-216ENST00000447734 NCOR1O75376 2440 aa0.63□□□□□ -2.31
PMS1-216ENST00000447734 KNL1Q8NG31 2342 aa0.63□□□□□ -2.31
PMS1-216ENST00000447734 K7EMI3 77 aa0.63□□□□□ -2.31
PMS1-216ENST00000447734 NMES1Q9C002 83 aa0.63□□□□□ -2.31
PMS1-216ENST00000447734 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
PMS1-216ENST00000447734 ZFYVE26Q68DK2 2539 aa0.62□□□□□ -2.31
PMS1-216ENST00000447734 SERF2P84101 59 aa0.62□□□□□ -2.31
PMS1-216ENST00000447734 OTOGQ6ZRI0 2925 aa0.62□□□□□ -2.31
PMS1-216ENST00000447734 WNK2Q9Y3S1 2297 aa0.62□□□□□ -2.31
PMS1-216ENST00000447734 CPS1P31327 1500 aa0.61□□□□□ -2.31
PMS1-216ENST00000447734 M0R1W7 72 aa0.61□□□□□ -2.31
PMS1-216ENST00000447734 IAPPP10997 89 aa0.61□□□□□ -2.31
PMS1-216ENST00000447734 CHD6Q8TD26 2715 aa0.61□□□□□ -2.31
PMS1-216ENST00000447734 DEFB130BP0DP73 79 aa0.6□□□□□ -2.31
PMS1-216ENST00000447734 DEFB130AP0DP74 79 aa0.6□□□□□ -2.31
PMS1-216ENST00000447734 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
PMS1-216ENST00000447734 MACF1Q9UPN3 7388 aaKnown RBP0.6□□□□□ -2.31
PMS1-216ENST00000447734 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
PMS1-216ENST00000447734 SPTA1P02549 2419 aa0.59□□□□□ -2.31
PMS1-216ENST00000447734 UNC79Q9P2D8 2635 aa0.59□□□□□ -2.31
PMS1-216ENST00000447734 LY75O60449 1722 aa0.59□□□□□ -2.31
PMS1-216ENST00000447734 ATRQ13535 2644 aa0.59□□□□□ -2.32
PMS1-216ENST00000447734 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.32
PMS1-216ENST00000447734 KIAA0586Q9BVV6 1533 aa0.59□□□□□ -2.32
PMS1-216ENST00000447734 PREX2Q70Z35 1606 aa0.58□□□□□ -2.32
PMS1-216ENST00000447734 M0R2T5 61 aa0.58□□□□□ -2.32
PMS1-216ENST00000447734 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms