RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 ATP11AUNQ6ZP68 121 aa11.76□□□□□ -0.53
ATG9A-215ENST00000446716 Q96NJ1 140 aa11.76□□□□□ -0.53
ATG9A-215ENST00000446716 KCNQ1DNQ9H478 68 aa11.76□□□□□ -0.53
ATG9A-215ENST00000446716 SMCPP49901 116 aaPredicted RBP11.74□□□□□ -0.53
ATG9A-215ENST00000446716 ZNF861PO60384 105 aa11.73□□□□□ -0.53
ATG9A-215ENST00000446716 STAB1Q9NY15 2570 aa11.73□□□□□ -0.53
ATG9A-215ENST00000446716 TRBV7-4A0A0J9YYF1 115 aa11.73□□□□□ -0.53
ATG9A-215ENST00000446716 CDIP1Q9H305 208 aa11.7□□□□□ -0.54
ATG9A-215ENST00000446716 LINC00304Q8N9R0 145 aa11.7□□□□□ -0.54
ATG9A-215ENST00000446716 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
ATG9A-215ENST00000446716 RANBP2P49792 3224 aaKnown RBP11.68□□□□□ -0.54
ATG9A-215ENST00000446716 C9orf129Q5T035 196 aaKnown RBP11.68□□□□□ -0.54
ATG9A-215ENST00000446716 TRAV22A0A0B4J277 110 aa11.67□□□□□ -0.54
ATG9A-215ENST00000446716 PSPHP1O15172 72 aa11.67□□□□□ -0.54
ATG9A-215ENST00000446716 SSBP3-AS1Q7Z2R9 100 aa11.67□□□□□ -0.54
ATG9A-215ENST00000446716 C8orf87E5RJ46 101 aa11.67□□□□□ -0.54
ATG9A-215ENST00000446716 ACYP2P14621 99 aa11.66□□□□□ -0.54
ATG9A-215ENST00000446716 PRO0461Q9UI25 63 aa11.66□□□□□ -0.54
ATG9A-215ENST00000446716 ZNF575Q86XF7 245 aa11.66□□□□□ -0.54
ATG9A-215ENST00000446716 SPAG11AQ6PDA7 123 aa11.65□□□□□ -0.54
ATG9A-215ENST00000446716 TLX1NBP0CAT3 122 aa11.65□□□□□ -0.54
ATG9A-215ENST00000446716 CASC10Q5T4H9 136 aa11.65□□□□□ -0.54
ATG9A-215ENST00000446716 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
ATG9A-215ENST00000446716 A8MWP4 228 aa11.63□□□□□ -0.55
ATG9A-215ENST00000446716 ZNF292O60281 2723 aa11.63□□□□□ -0.55
ATG9A-215ENST00000446716 COX6B2Q6YFQ2 88 aa11.62□□□□□ -0.55
ATG9A-215ENST00000446716 H3BPC8 53 aa11.61□□□□□ -0.55
ATG9A-215ENST00000446716 EIF4EBP3O60516 100 aaPredicted RBP11.61□□□□□ -0.55
ATG9A-215ENST00000446716 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
ATG9A-215ENST00000446716 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
ATG9A-215ENST00000446716 CNBPP62633 177 aaKnown RBP11.6□□□□□ -0.55
ATG9A-215ENST00000446716 IGFL1Q6UW32 110 aa11.6□□□□□ -0.55
ATG9A-215ENST00000446716 PSORS1C2Q9UIG4 136 aa11.6□□□□□ -0.55
ATG9A-215ENST00000446716 A0A1W2PNN7 141 aa11.59□□□□□ -0.55
ATG9A-215ENST00000446716 PLA2G2DQ9UNK4 145 aa11.59□□□□□ -0.55
ATG9A-215ENST00000446716 MRPL34Q9BQ48 92 aaKnown RBP11.59□□□□□ -0.55
ATG9A-215ENST00000446716 A0A1B0GU69 56 aa11.58□□□□□ -0.56
ATG9A-215ENST00000446716 ANAPC11Q9NYG5 84 aa11.57□□□□□ -0.56
ATG9A-215ENST00000446716 TEX15Q9BXT5 2789 aa11.56□□□□□ -0.56
ATG9A-215ENST00000446716 COL6A5A8TX70 2615 aa11.55□□□□□ -0.56
ATG9A-215ENST00000446716 K7EQZ3 153 aa11.55□□□□□ -0.56
ATG9A-215ENST00000446716 LOC101927531A0A1B0GV80 90 aa11.55□□□□□ -0.56
ATG9A-215ENST00000446716 TNP2Q05952 138 aa11.54□□□□□ -0.56
ATG9A-215ENST00000446716 PMAIP1Q13794 54 aa11.54□□□□□ -0.56
ATG9A-215ENST00000446716 Q8N377 158 aa11.53□□□□□ -0.56
ATG9A-215ENST00000446716 DSCR10P59022 87 aa11.53□□□□□ -0.56
ATG9A-215ENST00000446716 C9orf92A6NGG3 77 aa11.52□□□□□ -0.56
ATG9A-215ENST00000446716 OBSCN-AS1Q96MR7 158 aa11.52□□□□□ -0.57
ATG9A-215ENST00000446716 AKAP13Q12802 2813 aa11.51□□□□□ -0.57
ATG9A-215ENST00000446716 WIPF1O43516 503 aa11.5□□□□□ -0.57
ATG9A-215ENST00000446716 HTTP42858 3142 aa11.5□□□□□ -0.57
ATG9A-215ENST00000446716 A0A0G2JQZ4 141 aa11.48□□□□□ -0.57
ATG9A-215ENST00000446716 SPRR4Q96PI1 79 aa11.48□□□□□ -0.57
ATG9A-215ENST00000446716 C8orf17Q9NRJ1 99 aa11.48□□□□□ -0.57
ATG9A-215ENST00000446716 RPS28P62857 69 aaKnown RBP11.46□□□□□ -0.57
ATG9A-215ENST00000446716 MGAQ8IWI9 3026 aa11.46□□□□□ -0.57
ATG9A-215ENST00000446716 BAHCC1Q9P281 2608 aa11.46□□□□□ -0.58
ATG9A-215ENST00000446716 PCNTO95613 3336 aa11.46□□□□□ -0.58
ATG9A-215ENST00000446716 PRR15Q8IV56 129 aa11.45□□□□□ -0.58
ATG9A-215ENST00000446716 A0A1B0GVX0 72 aa11.45□□□□□ -0.58
ATG9A-215ENST00000446716 UNC79Q9P2D8 2635 aa11.44□□□□□ -0.58
ATG9A-215ENST00000446716 ERC2-IT1O76042 136 aa11.43□□□□□ -0.58
ATG9A-215ENST00000446716 CHD6Q8TD26 2715 aa11.41□□□□□ -0.58
ATG9A-215ENST00000446716 PRO0628Q9UI54 55 aa11.41□□□□□ -0.58
ATG9A-215ENST00000446716 LAMA3Q16787 3333 aa11.39□□□□□ -0.59
ATG9A-215ENST00000446716 IGLV8-61A0A075B6I0 122 aa11.38□□□□□ -0.59
ATG9A-215ENST00000446716 IGLV5-37A0A075B6J1 123 aa11.36□□□□□ -0.59
ATG9A-215ENST00000446716 CR1P17927 2039 aa11.35□□□□□ -0.59
ATG9A-215ENST00000446716 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
ATG9A-215ENST00000446716 TRANK1O15050 2925 aa11.34□□□□□ -0.59
ATG9A-215ENST00000446716 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.32□□□□□ -0.6
ATG9A-215ENST00000446716 DSPP15924 2871 aaKnown RBP11.32□□□□□ -0.6
ATG9A-215ENST00000446716 IGSF10Q6WRI0 2623 aa11.3□□□□□ -0.6
ATG9A-215ENST00000446716 RBM12B-AS1Q9P1G2 102 aa11.29□□□□□ -0.6
ATG9A-215ENST00000446716 A0A1W2PNM2 257 aa11.29□□□□□ -0.6
ATG9A-215ENST00000446716 NBEAL1Q6ZS30 2694 aa11.28□□□□□ -0.6
ATG9A-215ENST00000446716 A0A0C4DFX4 3053 aa11.28□□□□□ -0.6
ATG9A-215ENST00000446716 MKI67P46013 3256 aaKnown RBP11.26□□□□□ -0.61
ATG9A-215ENST00000446716 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
ATG9A-215ENST00000446716 WDFY4Q6ZS81 3184 aa11.25□□□□□ -0.61
ATG9A-215ENST00000446716 PRR26Q8N8Z3 221 aa11.24□□□□□ -0.61
ATG9A-215ENST00000446716 COA5Q86WW8 74 aa11.23□□□□□ -0.61
ATG9A-215ENST00000446716 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
ATG9A-215ENST00000446716 IGLV7-46A0A075B6I9 117 aa11.19□□□□□ -0.62
ATG9A-215ENST00000446716 CFAP54Q96N23 3096 aa11.19□□□□□ -0.62
ATG9A-215ENST00000446716 CD164Q04900 197 aa11.16□□□□□ -0.62
ATG9A-215ENST00000446716 BRCA2P51587 3418 aa11.16□□□□□ -0.62
ATG9A-215ENST00000446716 UBR5O95071 2799 aaPredicted RBP11.16□□□□□ -0.62
ATG9A-215ENST00000446716 PLAC8Q9NZF1 115 aa11.15□□□□□ -0.62
ATG9A-215ENST00000446716 Q6ZSA8 131 aa11.15□□□□□ -0.62
ATG9A-215ENST00000446716 MAP1AP78559 2803 aaPredicted RBP11.14□□□□□ -0.63
ATG9A-215ENST00000446716 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
ATG9A-215ENST00000446716 C4orf26Q17RF5 130 aa11.14□□□□□ -0.63
ATG9A-215ENST00000446716 GCN1Q92616 2671 aaKnown RBP11.13□□□□□ -0.63
ATG9A-215ENST00000446716 FAM229BQ4G0N7 80 aa11.12□□□□□ -0.63
ATG9A-215ENST00000446716 FAM104AQ969W3 186 aa11.12□□□□□ -0.63
ATG9A-215ENST00000446716 LCE6AA0A183 80 aa11.1□□□□□ -0.63
ATG9A-215ENST00000446716 UQCR11O14957 56 aa11.1□□□□□ -0.63
ATG9A-215ENST00000446716 Q8N1X5 172 aa11.09□□□□□ -0.63
ATG9A-215ENST00000446716 TRIOO75962 3097 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms