RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
LTBR-204ENST00000444814 XAGE1AQ9HD64 81 aa7.67□□□□□ -1.18
LTBR-204ENST00000444814 UQCR10Q9UDW1 63 aa7.67□□□□□ -1.18
LTBR-204ENST00000444814 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
LTBR-204ENST00000444814 NMUP48645 174 aa7.66□□□□□ -1.18
LTBR-204ENST00000444814 NDUFV3P56181 108 aaKnown RBP7.66□□□□□ -1.18
LTBR-204ENST00000444814 C9orf129Q5T035 196 aaKnown RBP7.66□□□□□ -1.18
LTBR-204ENST00000444814 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
LTBR-204ENST00000444814 TP73-AS1Q9UF72 201 aa7.66□□□□□ -1.18
LTBR-204ENST00000444814 HSPG2P98160 4391 aa7.65□□□□□ -1.18
LTBR-204ENST00000444814 LEPROTO15243 131 aa7.65□□□□□ -1.18
LTBR-204ENST00000444814 LINC00158P58513 81 aa7.65□□□□□ -1.18
LTBR-204ENST00000444814 Q6Q795 121 aa7.65□□□□□ -1.18
LTBR-204ENST00000444814 ANKRD29Q8N6D5 301 aa7.65□□□□□ -1.18
LTBR-204ENST00000444814 NDUFA12Q9UI09 145 aa7.65□□□□□ -1.18
LTBR-204ENST00000444814 PLA2G2DQ9UNK4 145 aa7.65□□□□□ -1.18
LTBR-204ENST00000444814 J3QQQ9 107 aa7.64□□□□□ -1.19
LTBR-204ENST00000444814 LINC01545Q5VT33 79 aa7.64□□□□□ -1.19
LTBR-204ENST00000444814 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
LTBR-204ENST00000444814 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
LTBR-204ENST00000444814 FAM168BA1KXE4 195 aa7.63□□□□□ -1.19
LTBR-204ENST00000444814 KRTAP10-4P60372 401 aaPredicted RBP7.63□□□□□ -1.19
LTBR-204ENST00000444814 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
LTBR-204ENST00000444814 REG3GQ6UW15 175 aa7.63□□□□□ -1.19
LTBR-204ENST00000444814 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
LTBR-204ENST00000444814 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
LTBR-204ENST00000444814 IFITM1P13164 125 aa7.62□□□□□ -1.19
LTBR-204ENST00000444814 HNRNPA3P51991 378 aaKnown RBP7.62□□□□□ -1.19
LTBR-204ENST00000444814 PMCHL2Q9BQD1 86 aa7.62□□□□□ -1.19
LTBR-204ENST00000444814 PAM16Q9Y3D7 125 aa7.62□□□□□ -1.19
LTBR-204ENST00000444814 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
LTBR-204ENST00000444814 PSORS1C2Q9UIG4 136 aa7.61□□□□□ -1.19
LTBR-204ENST00000444814 IGLV5-37A0A075B6J1 123 aa7.6□□□□□ -1.19
LTBR-204ENST00000444814 KRTAP29-1A8MX34 341 aaPredicted RBP7.6□□□□□ -1.19
LTBR-204ENST00000444814 ATOH7Q8N100 152 aa7.6□□□□□ -1.19
LTBR-204ENST00000444814 E9PLD3 99 aa7.59□□□□□ -1.19
LTBR-204ENST00000444814 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
LTBR-204ENST00000444814 DIRC1Q969H9 104 aa7.59□□□□□ -1.2
LTBR-204ENST00000444814 C8orf87E5RJ46 101 aa7.58□□□□□ -1.2
LTBR-204ENST00000444814 TAX1BP3O14907 124 aa7.58□□□□□ -1.2
LTBR-204ENST00000444814 K7EP34 96 aa7.57□□□□□ -1.2
LTBR-204ENST00000444814 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
LTBR-204ENST00000444814 SMIM13P0DJ93 91 aa7.57□□□□□ -1.2
LTBR-204ENST00000444814 DNAH8Q96JB1 4490 aa7.56□□□□□ -1.2
LTBR-204ENST00000444814 MIR7-3HGQ8N6C7 128 aa7.56□□□□□ -1.2
LTBR-204ENST00000444814 KRTAP7-1Q8IUC3 87 aa7.55□□□□□ -1.2
LTBR-204ENST00000444814 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
LTBR-204ENST00000444814 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
LTBR-204ENST00000444814 SPATA45Q537H7 98 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 Q6ZVQ6 151 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 FAM236AA0A1B0GUQ0 79 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 FAM236BA0A1B0GV22 79 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 M0R378 163 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 TMEM258P61165 79 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
LTBR-204ENST00000444814 COPS9Q8WXC6 57 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 KRTAP4-7Q9BYR0 210 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 RBM12B-AS1Q9P1G2 102 aa7.54□□□□□ -1.2
LTBR-204ENST00000444814 RPL37AP8A6NKH3 93 aa7.53□□□□□ -1.2
LTBR-204ENST00000444814 BCE1O60756 84 aa7.53□□□□□ -1.2
LTBR-204ENST00000444814 TSPEAR-AS2P59090 65 aa7.53□□□□□ -1.2
LTBR-204ENST00000444814 ZNF815PA8K554 130 aa7.52□□□□□ -1.21
LTBR-204ENST00000444814 UBE2AP49459 152 aa7.52□□□□□ -1.21
LTBR-204ENST00000444814 ZNF861PO60384 105 aa7.51□□□□□ -1.21
LTBR-204ENST00000444814 TIMM17BO60830 172 aa7.51□□□□□ -1.21
LTBR-204ENST00000444814 PRR15Q8IV56 129 aa7.51□□□□□ -1.21
LTBR-204ENST00000444814 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 H0Y9J4 135 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 IGLV1-50A0A075B6I6 118 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 LOC107984156A0A0G2JMH3 177 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 MT-ATP8P03928 68 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 ARL17AQ8IVW1 177 aa7.5□□□□□ -1.21
LTBR-204ENST00000444814 FAT1Q14517 4588 aa7.49□□□□□ -1.21
LTBR-204ENST00000444814 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
LTBR-204ENST00000444814 TRBV10-2A0A0K0K1G8 114 aa7.49□□□□□ -1.21
LTBR-204ENST00000444814 HINT1P49773 126 aaPredicted RBP7.49□□□□□ -1.21
LTBR-204ENST00000444814 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
LTBR-204ENST00000444814 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
LTBR-204ENST00000444814 F8W1H4 67 aa7.48□□□□□ -1.21
LTBR-204ENST00000444814 C9orf153Q5TBE3 101 aa7.48□□□□□ -1.21
LTBR-204ENST00000444814 PCLOQ9Y6V0 5065 aa7.47□□□□□ -1.21
LTBR-204ENST00000444814 S100A7L2Q5SY68 101 aa7.47□□□□□ -1.21
LTBR-204ENST00000444814 KRTAP11-1Q8IUC1 163 aa7.47□□□□□ -1.21
LTBR-204ENST00000444814 C3orf22Q8N5N4 141 aa7.47□□□□□ -1.21
LTBR-204ENST00000444814 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
LTBR-204ENST00000444814 NCR3O14931 201 aa7.46□□□□□ -1.21
LTBR-204ENST00000444814 UQCRQO14949 82 aa7.46□□□□□ -1.21
LTBR-204ENST00000444814 COX8AP10176 69 aa7.46□□□□□ -1.21
LTBR-204ENST00000444814 DAND5Q8N907 189 aa7.46□□□□□ -1.21
LTBR-204ENST00000444814 ABCA13Q86UQ4 5058 aa7.46□□□□□ -1.22
LTBR-204ENST00000444814 IMUPQ9GZP8 106 aa7.46□□□□□ -1.22
LTBR-204ENST00000444814 NDUFS5O43920 106 aa7.45□□□□□ -1.22
LTBR-204ENST00000444814 RAB37Q96AX2 223 aa7.45□□□□□ -1.22
LTBR-204ENST00000444814 ETDCA0A1B0GVM5 59 aa7.44□□□□□ -1.22
LTBR-204ENST00000444814 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
LTBR-204ENST00000444814 SLC25A34Q6PIV7 304 aa7.44□□□□□ -1.22
LTBR-204ENST00000444814 PCP2Q8IVA1 136 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms