RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 C6orf99Q4VX62 202 aa13.08□□□□□ -0.32
VPS13B-204ENST00000441350 REG3GQ6UW15 175 aa13.08□□□□□ -0.32
VPS13B-204ENST00000441350 C9orf118A6NHY6 69 aa13.06□□□□□ -0.32
VPS13B-204ENST00000441350 KRTAP4-16G5E9R7 235 aaPredicted RBP13.06□□□□□ -0.32
VPS13B-204ENST00000441350 NAA38Q9BRA0 125 aaKnown RBP13.06□□□□□ -0.32
VPS13B-204ENST00000441350 TRIAP1O43715 76 aa13.06□□□□□ -0.32
VPS13B-204ENST00000441350 DIRC1Q969H9 104 aa13.06□□□□□ -0.32
VPS13B-204ENST00000441350 PSMB2P49721 201 aa13.04□□□□□ -0.32
VPS13B-204ENST00000441350 PSORS1C2Q9UIG4 136 aa13.04□□□□□ -0.32
VPS13B-204ENST00000441350 TRBV7-6A0A0J9YX20 115 aa13.03□□□□□ -0.32
VPS13B-204ENST00000441350 H3BUT2 72 aa13.03□□□□□ -0.32
VPS13B-204ENST00000441350 CDK2AP2O75956 126 aa13.03□□□□□ -0.32
VPS13B-204ENST00000441350 BCE1O60756 84 aa13□□□□□ -0.33
VPS13B-204ENST00000441350 ETDCA0A1B0GVM5 59 aa12.99□□□□□ -0.33
VPS13B-204ENST00000441350 B5MCH6 92 aa12.99□□□□□ -0.33
VPS13B-204ENST00000441350 ELOF1P60002 83 aaKnown RBP12.99□□□□□ -0.33
VPS13B-204ENST00000441350 VAMP3Q15836 100 aa12.99□□□□□ -0.33
VPS13B-204ENST00000441350 COX6CP09669 75 aa12.99□□□□□ -0.33
VPS13B-204ENST00000441350 COX7BP24311 80 aa12.99□□□□□ -0.33
VPS13B-204ENST00000441350 A0A1W2PPM0 123 aa12.97□□□□□ -0.33
VPS13B-204ENST00000441350 H0YGX0 51 aa12.97□□□□□ -0.33
VPS13B-204ENST00000441350 C1orf137Q5JT78 98 aa12.97□□□□□ -0.33
VPS13B-204ENST00000441350 Q6ZRX8 168 aa12.97□□□□□ -0.33
VPS13B-204ENST00000441350 FAM19A1Q7Z5A9 133 aa12.97□□□□□ -0.33
VPS13B-204ENST00000441350 LINC00528Q8N1L1 170 aa12.97□□□□□ -0.33
VPS13B-204ENST00000441350 SMR3BP02814 79 aaPredicted RBP12.96□□□□□ -0.33
VPS13B-204ENST00000441350 SCGB1C2P0DMR2 95 aa12.96□□□□□ -0.33
VPS13B-204ENST00000441350 H0Y9J4 135 aa12.95□□□□□ -0.34
VPS13B-204ENST00000441350 KRTAP13-1Q8IUC0 172 aa12.95□□□□□ -0.34
VPS13B-204ENST00000441350 PRLHP81277 87 aa12.93□□□□□ -0.34
VPS13B-204ENST00000441350 LINC00575Q6W349 94 aa12.93□□□□□ -0.34
VPS13B-204ENST00000441350 CLEC2BQ92478 149 aa12.93□□□□□ -0.34
VPS13B-204ENST00000441350 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
VPS13B-204ENST00000441350 FABP2P12104 132 aa12.92□□□□□ -0.34
VPS13B-204ENST00000441350 LYRM7Q5U5X0 104 aa12.92□□□□□ -0.34
VPS13B-204ENST00000441350 Q9BRP9 147 aa12.92□□□□□ -0.34
VPS13B-204ENST00000441350 HSPG2P98160 4391 aa12.92□□□□□ -0.34
VPS13B-204ENST00000441350 VPS13BQ7Z7G8 4022 aa12.92□□□□□ -0.34
VPS13B-204ENST00000441350 UBE2AP49459 152 aa12.91□□□□□ -0.34
VPS13B-204ENST00000441350 RYR1P21817 5038 aa12.91□□□□□ -0.34
VPS13B-204ENST00000441350 IGLV7-43P04211 117 aa12.91□□□□□ -0.34
VPS13B-204ENST00000441350 INAFM2P0DMQ5 153 aa12.9□□□□□ -0.34
VPS13B-204ENST00000441350 TCL1BO95988 128 aa12.89□□□□□ -0.35
VPS13B-204ENST00000441350 RPL37AP61513 92 aaKnown RBP12.89□□□□□ -0.35
VPS13B-204ENST00000441350 SMCR5Q8TEV8 140 aa12.88□□□□□ -0.35
VPS13B-204ENST00000441350 DHRS4-AS1Q9P1J3 65 aa12.88□□□□□ -0.35
VPS13B-204ENST00000441350 TRBV20-1A0A075B6N2 111 aa12.87□□□□□ -0.35
VPS13B-204ENST00000441350 LST1O00453 97 aa12.87□□□□□ -0.35
VPS13B-204ENST00000441350 ZNF861PO60384 105 aa12.87□□□□□ -0.35
VPS13B-204ENST00000441350 A0A1B0GX51 115 aa12.86□□□□□ -0.35
VPS13B-204ENST00000441350 SLC25A20O43772 301 aa12.86□□□□□ -0.35
VPS13B-204ENST00000441350 KIAA1109Q2LD37 5005 aa12.86□□□□□ -0.35
VPS13B-204ENST00000441350 FAT1Q14517 4588 aa12.86□□□□□ -0.35
VPS13B-204ENST00000441350 hADV29S1A0JD25 119 aa12.85□□□□□ -0.35
VPS13B-204ENST00000441350 KRTAP10-4P60372 401 aaPredicted RBP12.85□□□□□ -0.35
VPS13B-204ENST00000441350 ERC2-IT1O76042 136 aa12.84□□□□□ -0.35
VPS13B-204ENST00000441350 HIGD2AQ9BW72 106 aa12.84□□□□□ -0.35
VPS13B-204ENST00000441350 SPCS1Q9Y6A9 102 aa12.84□□□□□ -0.35
VPS13B-204ENST00000441350 ATXN8Q156A1 80 aa12.84□□□□□ -0.35
VPS13B-204ENST00000441350 SRRM2Q9UQ35 2752 aaKnown RBP12.83□□□□□ -0.35
VPS13B-204ENST00000441350 TRACP01848 142 aa12.83□□□□□ -0.36
VPS13B-204ENST00000441350 FAM229AH3BQW9 127 aa12.81□□□□□ -0.36
VPS13B-204ENST00000441350 SNCGO76070 127 aa12.81□□□□□ -0.36
VPS13B-204ENST00000441350 A0A1B0GV90 55 aa12.8□□□□□ -0.36
VPS13B-204ENST00000441350 K7EP34 96 aa12.8□□□□□ -0.36
VPS13B-204ENST00000441350 KRTAP17-1Q9BYP8 105 aa12.8□□□□□ -0.36
VPS13B-204ENST00000441350 BIRC6Q9NR09 4857 aa12.78□□□□□ -0.36
VPS13B-204ENST00000441350 PLA2G1BP04054 148 aaKnown RBP12.78□□□□□ -0.36
VPS13B-204ENST00000441350 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.77□□□□□ -0.36
VPS13B-204ENST00000441350 Q6ZQY7 126 aa12.77□□□□□ -0.36
VPS13B-204ENST00000441350 H3BMG7 143 aa12.77□□□□□ -0.37
VPS13B-204ENST00000441350 Q5VSD8 79 aa12.77□□□□□ -0.37
VPS13B-204ENST00000441350 DNAL4O96015 105 aa12.76□□□□□ -0.37
VPS13B-204ENST00000441350 GTF2H5Q6ZYL4 71 aa12.75□□□□□ -0.37
VPS13B-204ENST00000441350 Q8N1X5 172 aa12.75□□□□□ -0.37
VPS13B-204ENST00000441350 ST20-AS1Q8NBB2 130 aa12.75□□□□□ -0.37
VPS13B-204ENST00000441350 SPINK6Q6UWN8 80 aa12.73□□□□□ -0.37
VPS13B-204ENST00000441350 IGLV5-48A0A075B6I7 105 aa12.72□□□□□ -0.37
VPS13B-204ENST00000441350 LINC01547P58512 204 aaPredicted RBP12.72□□□□□ -0.37
VPS13B-204ENST00000441350 C9JAW5 83 aa12.7□□□□□ -0.38
VPS13B-204ENST00000441350 OCIAD2Q56VL3 154 aa12.7□□□□□ -0.38
VPS13B-204ENST00000441350 SPRR4Q96PI1 79 aa12.7□□□□□ -0.38
VPS13B-204ENST00000441350 ORMDL1Q9P0S3 153 aa12.7□□□□□ -0.38
VPS13B-204ENST00000441350 ZNF706Q9Y5V0 76 aaPredicted RBP12.69□□□□□ -0.38
VPS13B-204ENST00000441350 Q8N377 158 aa12.68□□□□□ -0.38
VPS13B-204ENST00000441350 DEFB105AQ8NG35 78 aa12.68□□□□□ -0.38
VPS13B-204ENST00000441350 TEX49A0A1B0GTD5 131 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 BAALC-AS2P0C853 105 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 SPRR1BP22528 89 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 PKHD1L1Q86WI1 4243 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 UBE2V1Q13404 147 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 GAGE2AQ6NT46 116 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 MTURNQ8N3F0 131 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
VPS13B-204ENST00000441350 H3BQ85 93 aa12.65□□□□□ -0.38
VPS13B-204ENST00000441350 GHRHP01286 108 aa12.65□□□□□ -0.38
VPS13B-204ENST00000441350 LINC00483Q53H64 154 aa12.65□□□□□ -0.38
VPS13B-204ENST00000441350 PRO0461Q9UI25 63 aa12.65□□□□□ -0.38
VPS13B-204ENST00000441350 TMEM256-PLSCR3K7ERE1 68 aa12.63□□□□□ -0.39
VPS13B-204ENST00000441350 H3BT86 120 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms