RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 UQCRQO14949 82 aa12.21□□□□□ -0.45
LRCH3-207ENST00000441090 C3orf22Q8N5N4 141 aa12.21□□□□□ -0.45
LRCH3-207ENST00000441090 IGLV5-37A0A075B6J1 123 aa12.2□□□□□ -0.46
LRCH3-207ENST00000441090 COX7CP15954 63 aa12.19□□□□□ -0.46
LRCH3-207ENST00000441090 FAM168BA1KXE4 195 aa12.16□□□□□ -0.46
LRCH3-207ENST00000441090 Q6ZVQ6 151 aa12.16□□□□□ -0.46
LRCH3-207ENST00000441090 C9orf153Q5TBE3 101 aa12.15□□□□□ -0.46
LRCH3-207ENST00000441090 FAM19A1Q7Z5A9 133 aa12.15□□□□□ -0.47
LRCH3-207ENST00000441090 MGAM2Q2M2H8 2515 aa12.14□□□□□ -0.47
LRCH3-207ENST00000441090 IGLV1-50A0A075B6I6 118 aa12.14□□□□□ -0.47
LRCH3-207ENST00000441090 PRYO14603 147 aa12.14□□□□□ -0.47
LRCH3-207ENST00000441090 KRTAP7-1Q8IUC3 87 aa12.13□□□□□ -0.47
LRCH3-207ENST00000441090 LOC107984640A0A0U1RRK4 108 aa12.13□□□□□ -0.47
LRCH3-207ENST00000441090 KRTAP4-16G5E9R7 235 aaPredicted RBP12.13□□□□□ -0.47
LRCH3-207ENST00000441090 LINC01547P58512 204 aaPredicted RBP12.13□□□□□ -0.47
LRCH3-207ENST00000441090 RPL37AP8A6NKH3 93 aa12.12□□□□□ -0.47
LRCH3-207ENST00000441090 SPRR1AP35321 89 aa12.12□□□□□ -0.47
LRCH3-207ENST00000441090 Q6ZRX8 168 aa12.11□□□□□ -0.47
LRCH3-207ENST00000441090 COL7A1Q02388 2944 aa12.11□□□□□ -0.47
LRCH3-207ENST00000441090 SERP2Q8N6R1 65 aa12.11□□□□□ -0.47
LRCH3-207ENST00000441090 LYSTQ99698 3801 aa12.11□□□□□ -0.47
LRCH3-207ENST00000441090 DHRS4-AS1Q9P1J3 65 aa12.11□□□□□ -0.47
LRCH3-207ENST00000441090 DNAH9Q9NYC9 4486 aa12.1□□□□□ -0.47
LRCH3-207ENST00000441090 HAMPP81172 84 aa12.1□□□□□ -0.47
LRCH3-207ENST00000441090 KRTAP1-5Q9BYS1 174 aa12.1□□□□□ -0.47
LRCH3-207ENST00000441090 CRYGAP11844 174 aa12.08□□□□□ -0.48
LRCH3-207ENST00000441090 CXCL6P80162 114 aa12.08□□□□□ -0.48
LRCH3-207ENST00000441090 MRPL55Q7Z7F7 128 aaKnown RBP12.08□□□□□ -0.48
LRCH3-207ENST00000441090 Q8N377 158 aa12.08□□□□□ -0.48
LRCH3-207ENST00000441090 FAM19A5Q7Z5A7 132 aaPredicted RBP12.08□□□□□ -0.48
LRCH3-207ENST00000441090 Q9BRP9 147 aa12.08□□□□□ -0.48
LRCH3-207ENST00000441090 ETDCA0A1B0GVM5 59 aa12.07□□□□□ -0.48
LRCH3-207ENST00000441090 STAB2Q8WWQ8 2551 aa12.07□□□□□ -0.48
LRCH3-207ENST00000441090 DYNC2H1Q8NCM8 4307 aaKnown RBP12.06□□□□□ -0.48
LRCH3-207ENST00000441090 DEFB105AQ8NG35 78 aa12.06□□□□□ -0.48
LRCH3-207ENST00000441090 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
LRCH3-207ENST00000441090 APLNQ9ULZ1 77 aa12.05□□□□□ -0.48
LRCH3-207ENST00000441090 IGLV5-48A0A075B6I7 105 aa12.03□□□□□ -0.48
LRCH3-207ENST00000441090 UBE2DNLQ8IWF7 75 aa12.03□□□□□ -0.48
LRCH3-207ENST00000441090 CNBPP62633 177 aaKnown RBP12.02□□□□□ -0.49
LRCH3-207ENST00000441090 PSCAO43653 123 aa12□□□□□ -0.49
LRCH3-207ENST00000441090 B9D2Q9BPU9 175 aa12□□□□□ -0.49
LRCH3-207ENST00000441090 A0A096LNI7 61 aa11.99□□□□□ -0.49
LRCH3-207ENST00000441090 C16orf90A8MZG2 172 aa11.99□□□□□ -0.49
LRCH3-207ENST00000441090 REG3GQ6UW15 175 aa11.98□□□□□ -0.49
LRCH3-207ENST00000441090 MDFIQ99750 246 aa11.98□□□□□ -0.49
LRCH3-207ENST00000441090 BCE1O60756 84 aa11.98□□□□□ -0.49
LRCH3-207ENST00000441090 ST20-AS1Q8NBB2 130 aa11.98□□□□□ -0.49
LRCH3-207ENST00000441090 TNP2Q05952 138 aa11.97□□□□□ -0.49
LRCH3-207ENST00000441090 SCXQ7RTU7 201 aa11.96□□□□□ -0.49
LRCH3-207ENST00000441090 CSMD3Q7Z407 3707 aa11.96□□□□□ -0.5
LRCH3-207ENST00000441090 ERC2-IT1O76042 136 aa11.96□□□□□ -0.5
LRCH3-207ENST00000441090 UBE2BP63146 152 aa11.96□□□□□ -0.5
LRCH3-207ENST00000441090 CYSTM1Q9H1C7 97 aa11.96□□□□□ -0.5
LRCH3-207ENST00000441090 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
LRCH3-207ENST00000441090 IGKV2-24A0A0C4DH68 120 aa11.94□□□□□ -0.5
LRCH3-207ENST00000441090 C14orf177Q52M58 125 aa11.94□□□□□ -0.5
LRCH3-207ENST00000441090 NREPQ16612 68 aa11.93□□□□□ -0.5
LRCH3-207ENST00000441090 A0A1W2PNN7 141 aa11.93□□□□□ -0.5
LRCH3-207ENST00000441090 C3orf84H3BNL1 204 aa11.93□□□□□ -0.5
LRCH3-207ENST00000441090 A0A1B0GW54 56 aa11.92□□□□□ -0.5
LRCH3-207ENST00000441090 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.91□□□□□ -0.5
LRCH3-207ENST00000441090 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.5
LRCH3-207ENST00000441090 C1orf137Q5JT78 98 aa11.91□□□□□ -0.5
LRCH3-207ENST00000441090 TRAV7A0A075B6U4 112 aa11.9□□□□□ -0.5
LRCH3-207ENST00000441090 SMIM20Q8N5G0 67 aa11.9□□□□□ -0.5
LRCH3-207ENST00000441090 PLECQ15149 4684 aaKnown RBP11.9□□□□□ -0.5
LRCH3-207ENST00000441090 A0A1W2PNM2 257 aa11.89□□□□□ -0.51
LRCH3-207ENST00000441090 Q8NBF4 154 aa11.87□□□□□ -0.51
LRCH3-207ENST00000441090 NUPR2A6NF83 97 aa11.86□□□□□ -0.51
LRCH3-207ENST00000441090 SMIM29Q86T20 159 aa11.86□□□□□ -0.51
LRCH3-207ENST00000441090 NBDYA0A0U1RRE5 68 aa11.86□□□□□ -0.51
LRCH3-207ENST00000441090 IGKV4-1P06312 121 aa11.86□□□□□ -0.51
LRCH3-207ENST00000441090 TMEM258P61165 79 aa11.86□□□□□ -0.51
LRCH3-207ENST00000441090 BPY2O14599 106 aa11.85□□□□□ -0.51
LRCH3-207ENST00000441090 SPRR4Q96PI1 79 aa11.85□□□□□ -0.51
LRCH3-207ENST00000441090 TENM2Q9NT68 2774 aa11.85□□□□□ -0.51
LRCH3-207ENST00000441090 LRCOL1A6NCL2 159 aa11.84□□□□□ -0.51
LRCH3-207ENST00000441090 PRLHP81277 87 aa11.84□□□□□ -0.51
LRCH3-207ENST00000441090 Q8N9L7 120 aa11.84□□□□□ -0.51
LRCH3-207ENST00000441090 CHTF8P0CG12 524 aa11.83□□□□□ -0.52
LRCH3-207ENST00000441090 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
LRCH3-207ENST00000441090 C9orf163Q8N9P6 203 aa11.83□□□□□ -0.52
LRCH3-207ENST00000441090 PHF5AQ7RTV0 110 aaKnown RBP11.81□□□□□ -0.52
LRCH3-207ENST00000441090 Q6ZRN7 208 aaPredicted RBP11.8□□□□□ -0.52
LRCH3-207ENST00000441090 LINC00476Q8WZB0 136 aa11.8□□□□□ -0.52
LRCH3-207ENST00000441090 PKIGQ9Y2B9 76 aa11.8□□□□□ -0.52
LRCH3-207ENST00000441090 F8WEM9 126 aa11.79□□□□□ -0.52
LRCH3-207ENST00000441090 KRTAP11-1Q8IUC1 163 aa11.78□□□□□ -0.52
LRCH3-207ENST00000441090 HIGD2AQ9BW72 106 aa11.78□□□□□ -0.52
LRCH3-207ENST00000441090 H0Y9J4 135 aa11.76□□□□□ -0.53
LRCH3-207ENST00000441090 KLKP1Q107X0 134 aa11.76□□□□□ -0.53
LRCH3-207ENST00000441090 STARD9Q9P2P6 4700 aa11.75□□□□□ -0.53
LRCH3-207ENST00000441090 IGLV8-61A0A075B6I0 122 aa11.75□□□□□ -0.53
LRCH3-207ENST00000441090 VPS13DQ5THJ4 4388 aa11.75□□□□□ -0.53
LRCH3-207ENST00000441090 IGFL1Q6UW32 110 aa11.74□□□□□ -0.53
LRCH3-207ENST00000441090 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
LRCH3-207ENST00000441090 J3KT08 172 aa11.73□□□□□ -0.53
LRCH3-207ENST00000441090 RPS28P62857 69 aaKnown RBP11.73□□□□□ -0.53
LRCH3-207ENST00000441090 EPM2AB3EWF7 344 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms