RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 TRAV23DV6A0A075B6W5 121 aa8□□□□□ -1.13
LTBR-202ENST00000440421 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
LTBR-202ENST00000440421 ERC2-IT1O76042 136 aa7.98□□□□□ -1.13
LTBR-202ENST00000440421 SCGB1D4Q6XE38 83 aa7.98□□□□□ -1.13
LTBR-202ENST00000440421 Q6ZRX8 168 aa7.98□□□□□ -1.13
LTBR-202ENST00000440421 OR13C6PQ8NH95 151 aa7.98□□□□□ -1.13
LTBR-202ENST00000440421 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
LTBR-202ENST00000440421 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
LTBR-202ENST00000440421 HIST3H2BBQ8N257 126 aa7.97□□□□□ -1.13
LTBR-202ENST00000440421 Q9BRP9 147 aa7.97□□□□□ -1.13
LTBR-202ENST00000440421 ZNF73O43830 326 aaPredicted RBP7.96□□□□□ -1.14
LTBR-202ENST00000440421 S100A2P29034 98 aa7.96□□□□□ -1.14
LTBR-202ENST00000440421 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
LTBR-202ENST00000440421 PCP2Q8IVA1 136 aa7.95□□□□□ -1.14
LTBR-202ENST00000440421 HIST1H2BLQ99880 126 aa7.95□□□□□ -1.14
LTBR-202ENST00000440421 LPAP08519 4548 aa7.95□□□□□ -1.14
LTBR-202ENST00000440421 JOSD1Q15040 202 aaPredicted RBP7.94□□□□□ -1.14
LTBR-202ENST00000440421 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
LTBR-202ENST00000440421 S100A6P06703 90 aa7.93□□□□□ -1.14
LTBR-202ENST00000440421 AKR1D1P51857 326 aa7.93□□□□□ -1.14
LTBR-202ENST00000440421 SPANXDQ9BXN6 97 aa7.93□□□□□ -1.14
LTBR-202ENST00000440421 CBY1Q9Y3M2 126 aa7.93□□□□□ -1.14
LTBR-202ENST00000440421 HINT1P49773 126 aaPredicted RBP7.92□□□□□ -1.14
LTBR-202ENST00000440421 Q8NBF4 154 aa7.92□□□□□ -1.14
LTBR-202ENST00000440421 IGLV9-49A0A0B4J1Y8 123 aa7.91□□□□□ -1.14
LTBR-202ENST00000440421 C4orf48Q5BLP8 95 aa7.91□□□□□ -1.14
LTBR-202ENST00000440421 LINC00518Q8N0U6 118 aa7.91□□□□□ -1.14
LTBR-202ENST00000440421 SNRPEP62304 92 aaKnown RBP7.9□□□□□ -1.14
LTBR-202ENST00000440421 MOBPQ13875 183 aa7.9□□□□□ -1.14
LTBR-202ENST00000440421 SPAG11AQ6PDA7 123 aa7.9□□□□□ -1.14
LTBR-202ENST00000440421 ST20-AS1Q8NBB2 130 aa7.9□□□□□ -1.14
LTBR-202ENST00000440421 IFITM1P13164 125 aa7.88□□□□□ -1.15
LTBR-202ENST00000440421 CTAG1AP78358 180 aa7.88□□□□□ -1.15
LTBR-202ENST00000440421 C6orf99Q4VX62 202 aa7.88□□□□□ -1.15
LTBR-202ENST00000440421 MUSTN1Q8IVN3 82 aa7.88□□□□□ -1.15
LTBR-202ENST00000440421 COPS9Q8WXC6 57 aa7.88□□□□□ -1.15
LTBR-202ENST00000440421 RNF213Q63HN8 5207 aa7.87□□□□□ -1.15
LTBR-202ENST00000440421 HSBP1L1C9JCN9 74 aa7.87□□□□□ -1.15
LTBR-202ENST00000440421 Q6ZVH6 145 aa7.87□□□□□ -1.15
LTBR-202ENST00000440421 A6NDN8 102 aa7.86□□□□□ -1.15
LTBR-202ENST00000440421 COX7BP24311 80 aa7.86□□□□□ -1.15
LTBR-202ENST00000440421 IGLV7-46A0A075B6I9 117 aa7.85□□□□□ -1.15
LTBR-202ENST00000440421 ELOF1P60002 83 aaKnown RBP7.85□□□□□ -1.15
LTBR-202ENST00000440421 C9orf153Q5TBE3 101 aa7.85□□□□□ -1.15
LTBR-202ENST00000440421 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
LTBR-202ENST00000440421 SCGB1D1O95968 90 aa7.84□□□□□ -1.15
LTBR-202ENST00000440421 SPINK1P00995 79 aa7.84□□□□□ -1.15
LTBR-202ENST00000440421 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
LTBR-202ENST00000440421 C5orf52A6NGY3 159 aa7.82□□□□□ -1.16
LTBR-202ENST00000440421 TRAV13-2A0A0B4J235 113 aa7.8□□□□□ -1.16
LTBR-202ENST00000440421 TRBV7-6A0A0J9YX20 115 aa7.8□□□□□ -1.16
LTBR-202ENST00000440421 TPRXLQ17RH7 258 aa7.8□□□□□ -1.16
LTBR-202ENST00000440421 DEFB105AQ8NG35 78 aa7.8□□□□□ -1.16
LTBR-202ENST00000440421 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
LTBR-202ENST00000440421 SPRR1BP22528 89 aa7.79□□□□□ -1.16
LTBR-202ENST00000440421 TAL2Q16559 108 aa7.79□□□□□ -1.16
LTBR-202ENST00000440421 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
LTBR-202ENST00000440421 SLC25A34Q6PIV7 304 aa7.78□□□□□ -1.16
LTBR-202ENST00000440421 FP248Q71RG6 208 aaPredicted RBP7.78□□□□□ -1.16
LTBR-202ENST00000440421 SMIM11BQ8TCY0 68 aa7.78□□□□□ -1.16
LTBR-202ENST00000440421 A4D1N5 150 aa7.77□□□□□ -1.17
LTBR-202ENST00000440421 LAMTOR3Q9UHA4 124 aa7.77□□□□□ -1.17
LTBR-202ENST00000440421 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
LTBR-202ENST00000440421 Q1RN00 199 aa7.76□□□□□ -1.17
LTBR-202ENST00000440421 Q8N377 158 aa7.76□□□□□ -1.17
LTBR-202ENST00000440421 TEX49A0A1B0GTD5 131 aa7.74□□□□□ -1.17
LTBR-202ENST00000440421 SLC25A20O43772 301 aa7.74□□□□□ -1.17
LTBR-202ENST00000440421 COX8AP10176 69 aa7.74□□□□□ -1.17
LTBR-202ENST00000440421 HRCT1Q6UXD1 115 aa7.74□□□□□ -1.17
LTBR-202ENST00000440421 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
LTBR-202ENST00000440421 C12orf57Q99622 126 aa7.74□□□□□ -1.17
LTBR-202ENST00000440421 C14orf144Q96I85 54 aa7.72□□□□□ -1.17
LTBR-202ENST00000440421 PAM16Q9Y3D7 125 aa7.72□□□□□ -1.17
LTBR-202ENST00000440421 IGLV5-48A0A075B6I7 105 aa7.71□□□□□ -1.18
LTBR-202ENST00000440421 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.18
LTBR-202ENST00000440421 VAMP3Q15836 100 aa7.71□□□□□ -1.18
LTBR-202ENST00000440421 KRTAP13-3Q3SY46 172 aa7.71□□□□□ -1.18
LTBR-202ENST00000440421 SPATA45Q537H7 98 aa7.71□□□□□ -1.18
LTBR-202ENST00000440421 NHP2Q9NX24 153 aaKnown RBP7.71□□□□□ -1.18
LTBR-202ENST00000440421 DLEU1O43261 78 aa7.7□□□□□ -1.18
LTBR-202ENST00000440421 SMIM29Q86T20 159 aa7.7□□□□□ -1.18
LTBR-202ENST00000440421 VAMP8Q9BV40 100 aa7.69□□□□□ -1.18
LTBR-202ENST00000440421 PRO1933Q9H354 126 aa7.69□□□□□ -1.18
LTBR-202ENST00000440421 LINC00575Q6W349 94 aa7.68□□□□□ -1.18
LTBR-202ENST00000440421 A0A0G2JQZ4 141 aa7.67□□□□□ -1.18
LTBR-202ENST00000440421 LIMD2Q9BT23 127 aa7.67□□□□□ -1.18
LTBR-202ENST00000440421 H7C2G1 150 aa7.66□□□□□ -1.18
LTBR-202ENST00000440421 hADV29S1A0JD25 119 aa7.65□□□□□ -1.18
LTBR-202ENST00000440421 CD164Q04900 197 aa7.64□□□□□ -1.19
LTBR-202ENST00000440421 Q6ZQY7 126 aa7.64□□□□□ -1.19
LTBR-202ENST00000440421 C2orf91Q6ZV80 131 aa7.64□□□□□ -1.19
LTBR-202ENST00000440421 HIGD1BQ9P298 99 aa7.64□□□□□ -1.19
LTBR-202ENST00000440421 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
LTBR-202ENST00000440421 CFC1P0CG37 223 aa7.63□□□□□ -1.19
LTBR-202ENST00000440421 RAB37Q96AX2 223 aa7.63□□□□□ -1.19
LTBR-202ENST00000440421 MUC2Q02817 5179 aa7.63□□□□□ -1.19
LTBR-202ENST00000440421 BVES-AS1Q5T3Y7 98 aa7.62□□□□□ -1.19
LTBR-202ENST00000440421 A0A0U1RQV1 116 aa7.61□□□□□ -1.19
LTBR-202ENST00000440421 F8WEM9 126 aa7.61□□□□□ -1.19
LTBR-202ENST00000440421 TMA7Q9Y2S6 64 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms