RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 MOBPQ13875 183 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
SNRPD3-204ENST00000439775 IGLV9-49A0A0B4J1Y8 123 aa9.21□□□□□ -0.94
SNRPD3-204ENST00000439775 ZNF73O43830 326 aaPredicted RBP9.21□□□□□ -0.94
SNRPD3-204ENST00000439775 NPC2P61916 151 aa9.21□□□□□ -0.94
SNRPD3-204ENST00000439775 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.94
SNRPD3-204ENST00000439775 MUC17Q685J3 4493 aa9.21□□□□□ -0.94
SNRPD3-204ENST00000439775 LINC01545Q5VT33 79 aa9.2□□□□□ -0.94
SNRPD3-204ENST00000439775 CBY1Q9Y3M2 126 aa9.2□□□□□ -0.94
SNRPD3-204ENST00000439775 KRTAP13-3Q3SY46 172 aa9.19□□□□□ -0.94
SNRPD3-204ENST00000439775 LITAFQ99732 161 aa9.19□□□□□ -0.94
SNRPD3-204ENST00000439775 TIMM17BO60830 172 aa9.18□□□□□ -0.94
SNRPD3-204ENST00000439775 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
SNRPD3-204ENST00000439775 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
SNRPD3-204ENST00000439775 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
SNRPD3-204ENST00000439775 PET117Q6UWS5 81 aa9.17□□□□□ -0.94
SNRPD3-204ENST00000439775 Q8N377 158 aa9.17□□□□□ -0.94
SNRPD3-204ENST00000439775 LINC00308Q8TCZ7 52 aa9.17□□□□□ -0.94
SNRPD3-204ENST00000439775 HINT1P49773 126 aaPredicted RBP9.15□□□□□ -0.94
SNRPD3-204ENST00000439775 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
SNRPD3-204ENST00000439775 ZNF815PA8K554 130 aa9.14□□□□□ -0.95
SNRPD3-204ENST00000439775 SLC25A20O43772 301 aa9.13□□□□□ -0.95
SNRPD3-204ENST00000439775 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
SNRPD3-204ENST00000439775 ST20-AS1Q8NBB2 130 aa9.13□□□□□ -0.95
SNRPD3-204ENST00000439775 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
SNRPD3-204ENST00000439775 C3orf79P0CE67 100 aa9.11□□□□□ -0.95
SNRPD3-204ENST00000439775 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
SNRPD3-204ENST00000439775 COA6Q5JTJ3 125 aaKnown RBP9.11□□□□□ -0.95
SNRPD3-204ENST00000439775 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
SNRPD3-204ENST00000439775 DHRS4-AS1Q9P1J3 65 aa9.11□□□□□ -0.95
SNRPD3-204ENST00000439775 SPRR1BP22528 89 aa9.1□□□□□ -0.95
SNRPD3-204ENST00000439775 TTTY13Q9BZ97 58 aa9.09□□□□□ -0.95
SNRPD3-204ENST00000439775 ELOF1P60002 83 aaKnown RBP9.08□□□□□ -0.96
SNRPD3-204ENST00000439775 SLC25A34Q6PIV7 304 aa9.08□□□□□ -0.96
SNRPD3-204ENST00000439775 LINC00518Q8N0U6 118 aa9.08□□□□□ -0.96
SNRPD3-204ENST00000439775 KRTDAPP60985 99 aa9.06□□□□□ -0.96
SNRPD3-204ENST00000439775 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
SNRPD3-204ENST00000439775 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
SNRPD3-204ENST00000439775 C20orf202A1L168 122 aa9.04□□□□□ -0.96
SNRPD3-204ENST00000439775 COX7BP24311 80 aa9.04□□□□□ -0.96
SNRPD3-204ENST00000439775 SCGB1D4Q6XE38 83 aa9.04□□□□□ -0.96
SNRPD3-204ENST00000439775 COPS9Q8WXC6 57 aa9.04□□□□□ -0.96
SNRPD3-204ENST00000439775 TRBV7-6A0A0J9YX20 115 aa9.03□□□□□ -0.96
SNRPD3-204ENST00000439775 LAMTOR3Q9UHA4 124 aa9.03□□□□□ -0.96
SNRPD3-204ENST00000439775 IFITM1P13164 125 aa9.02□□□□□ -0.97
SNRPD3-204ENST00000439775 XP32Q5T750 250 aa9.02□□□□□ -0.97
SNRPD3-204ENST00000439775 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
SNRPD3-204ENST00000439775 ANKRD39Q53RE8 183 aa9.01□□□□□ -0.97
SNRPD3-204ENST00000439775 Q6ZVH6 145 aa9.01□□□□□ -0.97
SNRPD3-204ENST00000439775 KRTAP9-2Q9BYQ4 174 aa9.01□□□□□ -0.97
SNRPD3-204ENST00000439775 AKR1D1P51857 326 aa9□□□□□ -0.97
SNRPD3-204ENST00000439775 A0A1B0GWB2 263 aa8.99□□□□□ -0.97
SNRPD3-204ENST00000439775 TEX49A0A1B0GTD5 131 aa8.98□□□□□ -0.97
SNRPD3-204ENST00000439775 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
SNRPD3-204ENST00000439775 CD164Q04900 197 aa8.97□□□□□ -0.97
SNRPD3-204ENST00000439775 TAL2Q16559 108 aa8.97□□□□□ -0.97
SNRPD3-204ENST00000439775 ATOH7Q8N100 152 aa8.97□□□□□ -0.97
SNRPD3-204ENST00000439775 A6NDN8 102 aa8.96□□□□□ -0.98
SNRPD3-204ENST00000439775 Q1RN00 199 aa8.96□□□□□ -0.98
SNRPD3-204ENST00000439775 HRCT1Q6UXD1 115 aa8.96□□□□□ -0.98
SNRPD3-204ENST00000439775 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
SNRPD3-204ENST00000439775 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
SNRPD3-204ENST00000439775 PRO1933Q9H354 126 aa8.95□□□□□ -0.98
SNRPD3-204ENST00000439775 IGLV5-48A0A075B6I7 105 aa8.94□□□□□ -0.98
SNRPD3-204ENST00000439775 A4D1N5 150 aa8.94□□□□□ -0.98
SNRPD3-204ENST00000439775 SNRPEP62304 92 aaKnown RBP8.94□□□□□ -0.98
SNRPD3-204ENST00000439775 MUSTN1Q8IVN3 82 aa8.94□□□□□ -0.98
SNRPD3-204ENST00000439775 LINC01547P58512 204 aaPredicted RBP8.93□□□□□ -0.98
SNRPD3-204ENST00000439775 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
SNRPD3-204ENST00000439775 TRAV13-2A0A0B4J235 113 aa8.92□□□□□ -0.98
SNRPD3-204ENST00000439775 H7C2G1 150 aa8.91□□□□□ -0.98
SNRPD3-204ENST00000439775 Q5XG85 94 aa8.91□□□□□ -0.98
SNRPD3-204ENST00000439775 NHP2Q9NX24 153 aaKnown RBP8.9□□□□□ -0.98
SNRPD3-204ENST00000439775 SMIM11BQ8TCY0 68 aa8.89□□□□□ -0.99
SNRPD3-204ENST00000439775 HIST3H2BBQ8N257 126 aa8.87□□□□□ -0.99
SNRPD3-204ENST00000439775 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
SNRPD3-204ENST00000439775 HIST1H2BLQ99880 126 aa8.86□□□□□ -0.99
SNRPD3-204ENST00000439775 HSBP1L1C9JCN9 74 aa8.84□□□□□ -0.99
SNRPD3-204ENST00000439775 S100A2P29034 98 aa8.84□□□□□ -0.99
SNRPD3-204ENST00000439775 VAMP3Q15836 100 aa8.83□□□□□ -1
SNRPD3-204ENST00000439775 C1orf195Q5TG92 126 aa8.83□□□□□ -1
SNRPD3-204ENST00000439775 PCOTHQ58A44 107 aa8.82□□□□□ -1
SNRPD3-204ENST00000439775 A0A0G2JQZ4 141 aa8.81□□□□□ -1
SNRPD3-204ENST00000439775 F8WEM9 126 aa8.8□□□□□ -1
SNRPD3-204ENST00000439775 LINC00575Q6W349 94 aa8.8□□□□□ -1
SNRPD3-204ENST00000439775 IGLV8-61A0A075B6I0 122 aa8.79□□□□□ -1
SNRPD3-204ENST00000439775 LCE2CQ5TA81 110 aa8.79□□□□□ -1
SNRPD3-204ENST00000439775 TCL1BO95988 128 aa8.78□□□□□ -1
SNRPD3-204ENST00000439775 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
SNRPD3-204ENST00000439775 Q6ZQY7 126 aa8.77□□□□□ -1.01
SNRPD3-204ENST00000439775 hADV29S1A0JD25 119 aa8.76□□□□□ -1.01
SNRPD3-204ENST00000439775 S100A6P06703 90 aa8.75□□□□□ -1.01
SNRPD3-204ENST00000439775 Q6JHZ5 121 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms