RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 GAGE10A6NGK3 116 aa10.82□□□□□ -0.68
CCDC188-201ENST00000439765 M0R143 59 aa10.82□□□□□ -0.68
CCDC188-201ENST00000439765 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
CCDC188-201ENST00000439765 CFC1BP0CG36 223 aa10.81□□□□□ -0.68
CCDC188-201ENST00000439765 CFC1P0CG37 223 aa10.81□□□□□ -0.68
CCDC188-201ENST00000439765 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
CCDC188-201ENST00000439765 RPL37AP8A6NKH3 93 aa10.81□□□□□ -0.68
CCDC188-201ENST00000439765 IGLV7-43P04211 117 aa10.81□□□□□ -0.68
CCDC188-201ENST00000439765 TRAV13-2A0A0B4J235 113 aa10.8□□□□□ -0.68
CCDC188-201ENST00000439765 S100A7L2Q5SY68 101 aa10.79□□□□□ -0.68
CCDC188-201ENST00000439765 OR13C6PQ8NH95 151 aa10.79□□□□□ -0.68
CCDC188-201ENST00000439765 NHP2Q9NX24 153 aaKnown RBP10.79□□□□□ -0.68
CCDC188-201ENST00000439765 A0A0B4J2C4 111 aa10.78□□□□□ -0.68
CCDC188-201ENST00000439765 TRBV10-3A0A0K0K1G6 114 aa10.78□□□□□ -0.68
CCDC188-201ENST00000439765 A6NDN8 102 aa10.78□□□□□ -0.68
CCDC188-201ENST00000439765 IGLV6-57P01721 117 aa10.78□□□□□ -0.68
CCDC188-201ENST00000439765 TMEM126AQ9H061 195 aa10.78□□□□□ -0.68
CCDC188-201ENST00000439765 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
CCDC188-201ENST00000439765 RAB37Q96AX2 223 aa10.77□□□□□ -0.69
CCDC188-201ENST00000439765 A0A1B0GWB2 263 aa10.76□□□□□ -0.69
CCDC188-201ENST00000439765 REG3GQ6UW15 175 aa10.76□□□□□ -0.69
CCDC188-201ENST00000439765 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
CCDC188-201ENST00000439765 UBR4Q5T4S7 5183 aa10.74□□□□□ -0.69
CCDC188-201ENST00000439765 TNXBP22105 4242 aa10.74□□□□□ -0.69
CCDC188-201ENST00000439765 BATFQ16520 125 aa10.74□□□□□ -0.69
CCDC188-201ENST00000439765 K7ERJ3 54 aa10.73□□□□□ -0.69
CCDC188-201ENST00000439765 RPL13AP40429 203 aaKnown RBP10.73□□□□□ -0.69
CCDC188-201ENST00000439765 DIRC1Q969H9 104 aa10.73□□□□□ -0.69
CCDC188-201ENST00000439765 LINC01600Q96MT4 127 aa10.73□□□□□ -0.69
CCDC188-201ENST00000439765 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
CCDC188-201ENST00000439765 CBY1Q9Y3M2 126 aa10.72□□□□□ -0.69
CCDC188-201ENST00000439765 H0Y9J4 135 aa10.71□□□□□ -0.69
CCDC188-201ENST00000439765 PRYO14603 147 aa10.71□□□□□ -0.69
CCDC188-201ENST00000439765 BCE1O60756 84 aa10.71□□□□□ -0.69
CCDC188-201ENST00000439765 SNHG12Q9BXW3 62 aa10.71□□□□□ -0.69
CCDC188-201ENST00000439765 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
CCDC188-201ENST00000439765 H7C2G1 150 aa10.68□□□□□ -0.7
CCDC188-201ENST00000439765 ZNF861PO60384 105 aa10.68□□□□□ -0.7
CCDC188-201ENST00000439765 SMIM11BQ8TCY0 68 aa10.68□□□□□ -0.7
CCDC188-201ENST00000439765 SPRR1AP35321 89 aa10.68□□□□□ -0.7
CCDC188-201ENST00000439765 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
CCDC188-201ENST00000439765 RPL28P46779 137 aaKnown RBP10.66□□□□□ -0.7
CCDC188-201ENST00000439765 UBE2AP49459 152 aa10.66□□□□□ -0.7
CCDC188-201ENST00000439765 Q1RN00 199 aa10.65□□□□□ -0.7
CCDC188-201ENST00000439765 KRTAP4-16G5E9R7 235 aaPredicted RBP10.64□□□□□ -0.71
CCDC188-201ENST00000439765 TSPAN13O95857 204 aa10.64□□□□□ -0.71
CCDC188-201ENST00000439765 PRLHP81277 87 aa10.64□□□□□ -0.71
CCDC188-201ENST00000439765 C6orf99Q4VX62 202 aa10.64□□□□□ -0.71
CCDC188-201ENST00000439765 KRTAP10-8P60410 259 aa10.62□□□□□ -0.71
CCDC188-201ENST00000439765 FAM19A1Q7Z5A9 133 aa10.62□□□□□ -0.71
CCDC188-201ENST00000439765 ETDCA0A1B0GVM5 59 aa10.61□□□□□ -0.71
CCDC188-201ENST00000439765 KRTAP1-4P0C5Y4 121 aa10.61□□□□□ -0.71
CCDC188-201ENST00000439765 KRTAP13-1Q8IUC0 172 aa10.61□□□□□ -0.71
CCDC188-201ENST00000439765 TRBV7-6A0A0J9YX20 115 aa10.61□□□□□ -0.71
CCDC188-201ENST00000439765 PRR26Q8N8Z3 221 aa10.61□□□□□ -0.71
CCDC188-201ENST00000439765 B5MCH6 92 aa10.6□□□□□ -0.71
CCDC188-201ENST00000439765 COL5A1-AS1Q5SY13 56 aa10.6□□□□□ -0.71
CCDC188-201ENST00000439765 LRP2P98164 4655 aa10.6□□□□□ -0.71
CCDC188-201ENST00000439765 TAX1BP3O14907 124 aa10.59□□□□□ -0.71
CCDC188-201ENST00000439765 VAMP3Q15836 100 aa10.59□□□□□ -0.71
CCDC188-201ENST00000439765 TRIAP1O43715 76 aa10.58□□□□□ -0.72
CCDC188-201ENST00000439765 COX7BP24311 80 aa10.58□□□□□ -0.72
CCDC188-201ENST00000439765 PSMB2P49721 201 aa10.58□□□□□ -0.72
CCDC188-201ENST00000439765 ELOF1P60002 83 aaKnown RBP10.58□□□□□ -0.72
CCDC188-201ENST00000439765 Q6ZRX8 168 aa10.56□□□□□ -0.72
CCDC188-201ENST00000439765 C9orf118A6NHY6 69 aa10.55□□□□□ -0.72
CCDC188-201ENST00000439765 NAA38Q9BRA0 125 aaKnown RBP10.55□□□□□ -0.72
CCDC188-201ENST00000439765 H0YGX0 51 aa10.55□□□□□ -0.72
CCDC188-201ENST00000439765 COX6CP09669 75 aa10.55□□□□□ -0.72
CCDC188-201ENST00000439765 HIGD2AQ9BW72 106 aa10.55□□□□□ -0.72
CCDC188-201ENST00000439765 H3BUT2 72 aa10.53□□□□□ -0.72
CCDC188-201ENST00000439765 SCGB1C2P0DMR2 95 aa10.53□□□□□ -0.72
CCDC188-201ENST00000439765 Q9BRP9 147 aa10.53□□□□□ -0.72
CCDC188-201ENST00000439765 LINC00575Q6W349 94 aa10.51□□□□□ -0.73
CCDC188-201ENST00000439765 SMCR5Q8TEV8 140 aa10.51□□□□□ -0.73
CCDC188-201ENST00000439765 ANAPC11Q9NYG5 84 aa10.51□□□□□ -0.73
CCDC188-201ENST00000439765 DHRS4-AS1Q9P1J3 65 aa10.51□□□□□ -0.73
CCDC188-201ENST00000439765 A0A087X002 238 aa10.5□□□□□ -0.73
CCDC188-201ENST00000439765 CLEC2BQ92478 149 aa10.49□□□□□ -0.73
CCDC188-201ENST00000439765 FAM218AQ96MZ4 157 aa10.49□□□□□ -0.73
CCDC188-201ENST00000439765 SLC25A20O43772 301 aa10.48□□□□□ -0.73
CCDC188-201ENST00000439765 A0A1W2PPM0 123 aa10.47□□□□□ -0.73
CCDC188-201ENST00000439765 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
CCDC188-201ENST00000439765 ERC2-IT1O76042 136 aa10.47□□□□□ -0.73
CCDC188-201ENST00000439765 A0A1B0GX51 115 aa10.46□□□□□ -0.74
CCDC188-201ENST00000439765 CRYGAP11844 174 aa10.46□□□□□ -0.74
CCDC188-201ENST00000439765 LYRM7Q5U5X0 104 aa10.46□□□□□ -0.74
CCDC188-201ENST00000439765 SNCGO76070 127 aa10.44□□□□□ -0.74
CCDC188-201ENST00000439765 FABP2P12104 132 aa10.43□□□□□ -0.74
CCDC188-201ENST00000439765 RNF213Q63HN8 5207 aa10.43□□□□□ -0.74
CCDC188-201ENST00000439765 LST1O00453 97 aa10.42□□□□□ -0.74
CCDC188-201ENST00000439765 TCL1BO95988 128 aa10.42□□□□□ -0.74
CCDC188-201ENST00000439765 FAM229BQ4G0N7 80 aa10.42□□□□□ -0.74
CCDC188-201ENST00000439765 KRTAP13-2Q52LG2 175 aa10.42□□□□□ -0.74
CCDC188-201ENST00000439765 TYMSOSQ8TAI1 123 aa10.42□□□□□ -0.74
CCDC188-201ENST00000439765 SPRR4Q96PI1 79 aa10.42□□□□□ -0.74
CCDC188-201ENST00000439765 TRBV20-1A0A075B6N2 111 aa10.41□□□□□ -0.74
CCDC188-201ENST00000439765 ST20-AS1Q8NBB2 130 aa10.41□□□□□ -0.74
CCDC188-201ENST00000439765 ATXN8Q156A1 80 aa10.4□□□□□ -0.74
CCDC188-201ENST00000439765 ZNF706Q9Y5V0 76 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms