RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 NBDYA0A0U1RRE5 68 aa8.26□□□□□ -1.09
TCOF1-205ENST00000439160 KIAA0087Q14695 138 aa8.26□□□□□ -1.09
TCOF1-205ENST00000439160 PRR4Q16378 134 aa8.26□□□□□ -1.09
TCOF1-205ENST00000439160 Q6ZVQ6 151 aa8.26□□□□□ -1.09
TCOF1-205ENST00000439160 Q6ZRP5 223 aa8.26□□□□□ -1.09
TCOF1-205ENST00000439160 FAM30AQ9NZY2 134 aa8.26□□□□□ -1.09
TCOF1-205ENST00000439160 A0A0U1RQV1 116 aa8.25□□□□□ -1.09
TCOF1-205ENST00000439160 ZFHX4Q86UP3 3567 aa8.25□□□□□ -1.09
TCOF1-205ENST00000439160 NSD1Q96L73 2696 aaPredicted RBP8.25□□□□□ -1.09
TCOF1-205ENST00000439160 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
TCOF1-205ENST00000439160 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
TCOF1-205ENST00000439160 PRR34Q9NV39 138 aa8.23□□□□□ -1.09
TCOF1-205ENST00000439160 PHF5AQ7RTV0 110 aaKnown RBP8.23□□□□□ -1.09
TCOF1-205ENST00000439160 UTP20O75691 2785 aaKnown RBP8.23□□□□□ -1.09
TCOF1-205ENST00000439160 ELOF1P60002 83 aaKnown RBP8.22□□□□□ -1.09
TCOF1-205ENST00000439160 Q8N9L7 120 aa8.22□□□□□ -1.09
TCOF1-205ENST00000439160 LINC01547P58512 204 aaPredicted RBP8.21□□□□□ -1.1
TCOF1-205ENST00000439160 ZANQ9Y493 2812 aa8.21□□□□□ -1.1
TCOF1-205ENST00000439160 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
TCOF1-205ENST00000439160 VPREB1P12018 145 aa8.2□□□□□ -1.1
TCOF1-205ENST00000439160 FAM168BA1KXE4 195 aa8.2□□□□□ -1.1
TCOF1-205ENST00000439160 IGHV6-1A0A0B4J1U7 121 aa8.19□□□□□ -1.1
TCOF1-205ENST00000439160 Q6ZRX8 168 aa8.19□□□□□ -1.1
TCOF1-205ENST00000439160 C16orf90A8MZG2 172 aa8.18□□□□□ -1.1
TCOF1-205ENST00000439160 ST20-AS1Q8NBB2 130 aa8.18□□□□□ -1.1
TCOF1-205ENST00000439160 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
TCOF1-205ENST00000439160 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
TCOF1-205ENST00000439160 RTL8CO15255 209 aa8.17□□□□□ -1.1
TCOF1-205ENST00000439160 IGLV6-57P01721 117 aa8.17□□□□□ -1.1
TCOF1-205ENST00000439160 TM2D3Q9BRN9 247 aa8.17□□□□□ -1.1
TCOF1-205ENST00000439160 NDUFC1O43677 76 aa8.16□□□□□ -1.1
TCOF1-205ENST00000439160 CASC2Q6XLA1 102 aa8.16□□□□□ -1.1
TCOF1-205ENST00000439160 TRBV7-6A0A0J9YX20 115 aa8.16□□□□□ -1.1
TCOF1-205ENST00000439160 ASH1LQ9NR48 2969 aaKnown RBP8.16□□□□□ -1.1
TCOF1-205ENST00000439160 LINC00208Q96KT6 92 aa8.16□□□□□ -1.1
TCOF1-205ENST00000439160 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
TCOF1-205ENST00000439160 SMIM26A0A096LP01 95 aa8.13□□□□□ -1.11
TCOF1-205ENST00000439160 CRYGAP11844 174 aa8.13□□□□□ -1.11
TCOF1-205ENST00000439160 MOBPQ13875 183 aa8.12□□□□□ -1.11
TCOF1-205ENST00000439160 Q6ZQT0 140 aa8.12□□□□□ -1.11
TCOF1-205ENST00000439160 WWC2-AS2Q96NR7 200 aa8.12□□□□□ -1.11
TCOF1-205ENST00000439160 SPTSSBQ8NFR3 76 aa8.12□□□□□ -1.11
TCOF1-205ENST00000439160 RELNP78509 3460 aa8.12□□□□□ -1.11
TCOF1-205ENST00000439160 APCP25054 2843 aa8.11□□□□□ -1.11
TCOF1-205ENST00000439160 HIVEP1P15822 2718 aa8.11□□□□□ -1.11
TCOF1-205ENST00000439160 CASC10Q5T4H9 136 aa8.11□□□□□ -1.11
TCOF1-205ENST00000439160 SERP1Q9Y6X1 66 aa8.11□□□□□ -1.11
TCOF1-205ENST00000439160 LINC00476Q8WZB0 136 aa8.11□□□□□ -1.11
TCOF1-205ENST00000439160 CXCL6P80162 114 aa8.1□□□□□ -1.11
TCOF1-205ENST00000439160 TMEM254Q8TBM7 123 aa8.09□□□□□ -1.11
TCOF1-205ENST00000439160 Q8NBF4 154 aa8.09□□□□□ -1.11
TCOF1-205ENST00000439160 FAM104AQ969W3 186 aa8.09□□□□□ -1.11
TCOF1-205ENST00000439160 C9orf129Q5T035 196 aaKnown RBP8.09□□□□□ -1.12
TCOF1-205ENST00000439160 HCG22E2RYF7 251 aa8.08□□□□□ -1.12
TCOF1-205ENST00000439160 RETNLBQ9BQ08 111 aa8.08□□□□□ -1.12
TCOF1-205ENST00000439160 ATP5EP56381 51 aaPredicted RBP8.08□□□□□ -1.12
TCOF1-205ENST00000439160 CELSR2Q9HCU4 2923 aa8.08□□□□□ -1.12
TCOF1-205ENST00000439160 IGLV1-50A0A075B6I6 118 aa8.07□□□□□ -1.12
TCOF1-205ENST00000439160 KCNQ1DNQ9H478 68 aa8.07□□□□□ -1.12
TCOF1-205ENST00000439160 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
TCOF1-205ENST00000439160 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
TCOF1-205ENST00000439160 SVIPQ8NHG7 77 aa8.06□□□□□ -1.12
TCOF1-205ENST00000439160 C4orf26Q17RF5 130 aa8.05□□□□□ -1.12
TCOF1-205ENST00000439160 PCOTHQ58A44 107 aa8.05□□□□□ -1.12
TCOF1-205ENST00000439160 SMG1Q96Q15 3661 aaKnown RBP8.05□□□□□ -1.12
TCOF1-205ENST00000439160 SMIM29Q86T20 159 aa8.05□□□□□ -1.12
TCOF1-205ENST00000439160 BCE1O60756 84 aa8.04□□□□□ -1.12
TCOF1-205ENST00000439160 SEC61GP60059 68 aa8.04□□□□□ -1.12
TCOF1-205ENST00000439160 CRYBG3Q68DQ2 2970 aa8.04□□□□□ -1.12
TCOF1-205ENST00000439160 WIPF1O43516 503 aa8.04□□□□□ -1.12
TCOF1-205ENST00000439160 SPACA4Q8TDM5 124 aa8.03□□□□□ -1.12
TCOF1-205ENST00000439160 H0Y9P7 68 aa8.02□□□□□ -1.12
TCOF1-205ENST00000439160 APLNQ9ULZ1 77 aa8.02□□□□□ -1.12
TCOF1-205ENST00000439160 NF1P21359 2839 aa8.02□□□□□ -1.13
TCOF1-205ENST00000439160 C9orf163Q8N9P6 203 aa8.01□□□□□ -1.13
TCOF1-205ENST00000439160 A0A087WTM6 91 aa8□□□□□ -1.13
TCOF1-205ENST00000439160 STAB2Q8WWQ8 2551 aa7.99□□□□□ -1.13
TCOF1-205ENST00000439160 PSPHP1O15172 72 aa7.99□□□□□ -1.13
TCOF1-205ENST00000439160 HRNRQ86YZ3 2850 aaPredicted RBP7.99□□□□□ -1.13
TCOF1-205ENST00000439160 NIPBLQ6KC79 2804 aaeCLIP7.99□□□□□ -1.133e-7■■■■■ 27.8
TCOF1-205ENST00000439160 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
TCOF1-205ENST00000439160 RPS28P62857 69 aaKnown RBP7.98□□□□□ -1.13
TCOF1-205ENST00000439160 A0A1B0GW54 56 aa7.98□□□□□ -1.13
TCOF1-205ENST00000439160 A0A1W2PNN7 141 aa7.98□□□□□ -1.13
TCOF1-205ENST00000439160 TLX1NBP0CAT3 122 aa7.98□□□□□ -1.13
TCOF1-205ENST00000439160 LIMD2Q9BT23 127 aa7.98□□□□□ -1.13
TCOF1-205ENST00000439160 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
TCOF1-205ENST00000439160 Q8N377 158 aa7.98□□□□□ -1.13
TCOF1-205ENST00000439160 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
TCOF1-205ENST00000439160 DCHS2Q6V1P9 2916 aa7.96□□□□□ -1.13
TCOF1-205ENST00000439160 KMT2BQ9UMN6 2715 aaPredicted RBP7.96□□□□□ -1.14
TCOF1-205ENST00000439160 V9GYY9 64 aa7.96□□□□□ -1.14
TCOF1-205ENST00000439160 A6NED7 52 aa7.96□□□□□ -1.14
TCOF1-205ENST00000439160 TRBV7-4A0A0J9YYF1 115 aa7.95□□□□□ -1.14
TCOF1-205ENST00000439160 hDV103S1A0JD37 113 aa7.95□□□□□ -1.14
TCOF1-205ENST00000439160 C1orf64Q8NEQ6 169 aa7.95□□□□□ -1.14
TCOF1-205ENST00000439160 FBN2P35556 2912 aa7.94□□□□□ -1.14
TCOF1-205ENST00000439160 ERC2-IT1O76042 136 aa7.94□□□□□ -1.14
TCOF1-205ENST00000439160 IGFL1Q6UW32 110 aa7.93□□□□□ -1.14
TCOF1-205ENST00000439160 TYMSOSQ8TAI1 123 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms