RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 UQCR11O14957 56 aa9.06□□□□□ -0.96
LRCH3-206ENST00000438796 ZNF462Q96JM2 2506 aa9.06□□□□□ -0.96
LRCH3-206ENST00000438796 ZNF575Q86XF7 245 aa9.06□□□□□ -0.96
LRCH3-206ENST00000438796 A0A1B0GVX0 72 aa9.05□□□□□ -0.96
LRCH3-206ENST00000438796 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
LRCH3-206ENST00000438796 PRO0461Q9UI25 63 aa9.03□□□□□ -0.96
LRCH3-206ENST00000438796 M0R2T5 61 aa9.03□□□□□ -0.96
LRCH3-206ENST00000438796 KCNQ1DNQ9H478 68 aa9.03□□□□□ -0.96
LRCH3-206ENST00000438796 PRR15Q8IV56 129 aa9.02□□□□□ -0.96
LRCH3-206ENST00000438796 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
LRCH3-206ENST00000438796 USP9XQ93008 2570 aaPredicted RBP9.02□□□□□ -0.97
LRCH3-206ENST00000438796 PSORS1C2Q9UIG4 136 aa9.01□□□□□ -0.97
LRCH3-206ENST00000438796 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
LRCH3-206ENST00000438796 CASC10Q5T4H9 136 aa9.01□□□□□ -0.97
LRCH3-206ENST00000438796 Q8N377 158 aa9.01□□□□□ -0.97
LRCH3-206ENST00000438796 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
LRCH3-206ENST00000438796 LITAFQ99732 161 aa9□□□□□ -0.97
LRCH3-206ENST00000438796 PKD1L2Q7Z442 2459 aa8.98□□□□□ -0.97
LRCH3-206ENST00000438796 ANKRD11Q6UB99 2663 aaPredicted RBP8.98□□□□□ -0.97
LRCH3-206ENST00000438796 C19orf73Q9NVV2 129 aa8.97□□□□□ -0.97
LRCH3-206ENST00000438796 EIF4EBP3O60516 100 aaPredicted RBP8.95□□□□□ -0.98
LRCH3-206ENST00000438796 ERC2-IT1O76042 136 aa8.93□□□□□ -0.98
LRCH3-206ENST00000438796 SPTBN4Q9H254 2564 aa8.92□□□□□ -0.98
LRCH3-206ENST00000438796 LINC00336Q6ZUF6 198 aa8.92□□□□□ -0.98
LRCH3-206ENST00000438796 Q6ZSA8 131 aa8.92□□□□□ -0.98
LRCH3-206ENST00000438796 C9orf163Q8N9P6 203 aa8.91□□□□□ -0.98
LRCH3-206ENST00000438796 RPS28P62857 69 aaKnown RBP8.9□□□□□ -0.98
LRCH3-206ENST00000438796 CR1P17927 2039 aa8.9□□□□□ -0.99
LRCH3-206ENST00000438796 CDC42SE1Q9NRR8 79 aa8.89□□□□□ -0.99
LRCH3-206ENST00000438796 PRR34Q9NV39 138 aa8.88□□□□□ -0.99
LRCH3-206ENST00000438796 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
LRCH3-206ENST00000438796 GIG44P09565 113 aaPredicted RBP8.88□□□□□ -0.99
LRCH3-206ENST00000438796 CYP4F30PQ9H0H9 118 aa8.87□□□□□ -0.99
LRCH3-206ENST00000438796 FAM104AQ969W3 186 aa8.87□□□□□ -0.99
LRCH3-206ENST00000438796 TNP2Q05952 138 aa8.87□□□□□ -0.99
LRCH3-206ENST00000438796 BPTFQ12830 3046 aa8.86□□□□□ -0.99
LRCH3-206ENST00000438796 UTRNP46939 3433 aa8.86□□□□□ -0.99
LRCH3-206ENST00000438796 MTORP42345 2549 aa8.85□□□□□ -0.99
LRCH3-206ENST00000438796 POLQO75417 2590 aa8.85□□□□□ -0.99
LRCH3-206ENST00000438796 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
LRCH3-206ENST00000438796 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
LRCH3-206ENST00000438796 DNAH12Q6ZR08 3092 aa8.84□□□□□ -1
LRCH3-206ENST00000438796 IGLV7-46A0A075B6I9 117 aa8.83□□□□□ -1
LRCH3-206ENST00000438796 PRR26Q8N8Z3 221 aa8.83□□□□□ -1
LRCH3-206ENST00000438796 USP9YO00507 2555 aaPredicted RBP8.82□□□□□ -1
LRCH3-206ENST00000438796 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
LRCH3-206ENST00000438796 CHD8Q9HCK8 2581 aa8.81□□□□□ -1
LRCH3-206ENST00000438796 PLA2G2DQ9UNK4 145 aa8.8□□□□□ -1
LRCH3-206ENST00000438796 LUZP6Q538Z0 58 aa8.79□□□□□ -1
LRCH3-206ENST00000438796 A0A096LNT2 108 aa8.76□□□□□ -1.01
LRCH3-206ENST00000438796 FASNP49327 2511 aaKnown RBP8.75□□□□□ -1.01
LRCH3-206ENST00000438796 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
LRCH3-206ENST00000438796 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
LRCH3-206ENST00000438796 CD164Q04900 197 aa8.73□□□□□ -1.01
LRCH3-206ENST00000438796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.73□□□□□ -1.01
LRCH3-206ENST00000438796 C5orf42Q9H799 3197 aa8.71□□□□□ -1.01
LRCH3-206ENST00000438796 KLK9Q2XQG4 91 aa8.7□□□□□ -1.02
LRCH3-206ENST00000438796 LINC00483Q53H64 154 aa8.7□□□□□ -1.02
LRCH3-206ENST00000438796 USP24Q9UPU5 2620 aa8.7□□□□□ -1.02
LRCH3-206ENST00000438796 CEP295Q9C0D2 2601 aa8.7□□□□□ -1.02
LRCH3-206ENST00000438796 KRTAP1-3Q8IUG1 177 aa8.69□□□□□ -1.02
LRCH3-206ENST00000438796 H7BZZ5 65 aa8.69□□□□□ -1.02
LRCH3-206ENST00000438796 KLKP1Q107X0 134 aa8.68□□□□□ -1.02
LRCH3-206ENST00000438796 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
LRCH3-206ENST00000438796 S4R3F8 94 aa8.66□□□□□ -1.02
LRCH3-206ENST00000438796 LCA10Q71F78 164 aa8.63□□□□□ -1.03
LRCH3-206ENST00000438796 A0A1B0GU33 70 aa8.62□□□□□ -1.03
LRCH3-206ENST00000438796 KRTAP1-1Q07627 177 aa8.61□□□□□ -1.03
LRCH3-206ENST00000438796 Q1T7F1 81 aa8.61□□□□□ -1.03
LRCH3-206ENST00000438796 CEP350Q5VT06 3117 aa8.6□□□□□ -1.03
LRCH3-206ENST00000438796 WIPF1O43516 503 aa8.6□□□□□ -1.03
LRCH3-206ENST00000438796 HRES1P13985 223 aa8.59□□□□□ -1.03
LRCH3-206ENST00000438796 SPANXA2-OT1Q8N9U9 137 aa8.58□□□□□ -1.04
LRCH3-206ENST00000438796 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
LRCH3-206ENST00000438796 PRRC2CQ9Y520 2896 aaKnown RBP8.53□□□□□ -1.04
LRCH3-206ENST00000438796 Q5VSD8 79 aa8.52□□□□□ -1.05
LRCH3-206ENST00000438796 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.05
LRCH3-206ENST00000438796 Q8N9P0 234 aaPredicted RBP8.5□□□□□ -1.05
LRCH3-206ENST00000438796 R4GN34 69 aa8.49□□□□□ -1.05
LRCH3-206ENST00000438796 OCR1Q9BZK8 76 aa8.46□□□□□ -1.05
LRCH3-206ENST00000438796 MGAM2Q2M2H8 2515 aa8.45□□□□□ -1.06
LRCH3-206ENST00000438796 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
LRCH3-206ENST00000438796 PCNTO95613 3336 aa8.43□□□□□ -1.06
LRCH3-206ENST00000438796 FAM229BQ4G0N7 80 aa8.43□□□□□ -1.06
LRCH3-206ENST00000438796 SPINK7P58062 85 aa8.42□□□□□ -1.06
LRCH3-206ENST00000438796 DMAC1Q96GE9 116 aa8.42□□□□□ -1.06
LRCH3-206ENST00000438796 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
LRCH3-206ENST00000438796 PRAC1Q96KF2 57 aa8.4□□□□□ -1.06
LRCH3-206ENST00000438796 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-206ENST00000438796 Q5W150 140 aa8.39□□□□□ -1.07
LRCH3-206ENST00000438796 MMP24-AS1A0A0U1RRL7 71 aa8.39□□□□□ -1.07
LRCH3-206ENST00000438796 HECTD1Q9ULT8 2610 aa8.38□□□□□ -1.07
LRCH3-206ENST00000438796 M0QZ58 72 aa8.35□□□□□ -1.07
LRCH3-206ENST00000438796 KRTAP10-1P60331 282 aa8.35□□□□□ -1.07
LRCH3-206ENST00000438796 KRTAP10-2P60368 255 aa8.35□□□□□ -1.07
LRCH3-206ENST00000438796 Q8NDZ9 215 aa8.35□□□□□ -1.07
LRCH3-206ENST00000438796 Q75L30 129 aa8.33□□□□□ -1.08
LRCH3-206ENST00000438796 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
LRCH3-206ENST00000438796 EPG5Q9HCE0 2579 aa8.32□□□□□ -1.08
LRCH3-206ENST00000438796 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms