RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 LITAFQ99732 161 aa10.21□□□□□ -0.78
NEDD4-202ENST00000435532 A8MWP4 228 aa10.21□□□□□ -0.78
NEDD4-202ENST00000435532 CENPFP49454 3210 aa10.19□□□□□ -0.78
NEDD4-202ENST00000435532 PSORS1C2Q9UIG4 136 aa10.18□□□□□ -0.78
NEDD4-202ENST00000435532 TRAV22A0A0B4J277 110 aa10.17□□□□□ -0.78
NEDD4-202ENST00000435532 MRPL34Q9BQ48 92 aaKnown RBP10.17□□□□□ -0.78
NEDD4-202ENST00000435532 LOC101927531A0A1B0GV80 90 aa10.16□□□□□ -0.78
NEDD4-202ENST00000435532 TNP2Q05952 138 aa10.15□□□□□ -0.78
NEDD4-202ENST00000435532 A0A1W2PNN7 141 aa10.14□□□□□ -0.79
NEDD4-202ENST00000435532 IGFL1Q6UW32 110 aa10.13□□□□□ -0.79
NEDD4-202ENST00000435532 SPRR4Q96PI1 79 aa10.11□□□□□ -0.79
NEDD4-202ENST00000435532 A0A1B0GU69 56 aa10.1□□□□□ -0.79
NEDD4-202ENST00000435532 C9orf92A6NGG3 77 aa10.09□□□□□ -0.79
NEDD4-202ENST00000435532 DSCR10P59022 87 aa10.09□□□□□ -0.79
NEDD4-202ENST00000435532 IGLV5-37A0A075B6J1 123 aa10.08□□□□□ -0.8
NEDD4-202ENST00000435532 OBSCN-AS1Q96MR7 158 aa10.07□□□□□ -0.8
NEDD4-202ENST00000435532 RBM12B-AS1Q9P1G2 102 aa10.07□□□□□ -0.8
NEDD4-202ENST00000435532 A0A1B0GVX0 72 aa10.05□□□□□ -0.8
NEDD4-202ENST00000435532 C8orf17Q9NRJ1 99 aa10.05□□□□□ -0.8
NEDD4-202ENST00000435532 A0A0U1RQV1 116 aa10.04□□□□□ -0.8
NEDD4-202ENST00000435532 SMCPP49901 116 aaPredicted RBP10.04□□□□□ -0.8
NEDD4-202ENST00000435532 Q8N377 158 aa10.04□□□□□ -0.8
NEDD4-202ENST00000435532 ANAPC11Q9NYG5 84 aa10.01□□□□□ -0.81
NEDD4-202ENST00000435532 K7EQZ3 153 aa10.01□□□□□ -0.81
NEDD4-202ENST00000435532 PRR15Q8IV56 129 aa10□□□□□ -0.81
NEDD4-202ENST00000435532 PRO0461Q9UI25 63 aa10□□□□□ -0.81
NEDD4-202ENST00000435532 PSPHP1O15172 72 aa9.98□□□□□ -0.81
NEDD4-202ENST00000435532 LCE6AA0A183 80 aa9.97□□□□□ -0.81
NEDD4-202ENST00000435532 CR1P17927 2039 aa9.97□□□□□ -0.81
NEDD4-202ENST00000435532 CD164Q04900 197 aa9.96□□□□□ -0.81
NEDD4-202ENST00000435532 FAM229BQ4G0N7 80 aa9.93□□□□□ -0.82
NEDD4-202ENST00000435532 BAHCC1Q9P281 2608 aa9.93□□□□□ -0.82
NEDD4-202ENST00000435532 CEP350Q5VT06 3117 aa9.93□□□□□ -0.82
NEDD4-202ENST00000435532 GOLGB1Q14789 3259 aaKnown RBP9.92□□□□□ -0.82
NEDD4-202ENST00000435532 MGAM2Q2M2H8 2515 aa9.92□□□□□ -0.82
NEDD4-202ENST00000435532 IGLV7-46A0A075B6I9 117 aa9.91□□□□□ -0.82
NEDD4-202ENST00000435532 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
NEDD4-202ENST00000435532 PLAC8Q9NZF1 115 aa9.91□□□□□ -0.82
NEDD4-202ENST00000435532 ERC2-IT1O76042 136 aa9.9□□□□□ -0.82
NEDD4-202ENST00000435532 USP24Q9UPU5 2620 aa9.89□□□□□ -0.83
NEDD4-202ENST00000435532 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
NEDD4-202ENST00000435532 MAST4O15021 2626 aa9.89□□□□□ -0.83
NEDD4-202ENST00000435532 PMAIP1Q13794 54 aa9.88□□□□□ -0.83
NEDD4-202ENST00000435532 Q6ZSA8 131 aa9.88□□□□□ -0.83
NEDD4-202ENST00000435532 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
NEDD4-202ENST00000435532 CFAP46Q8IYW2 2715 aa9.86□□□□□ -0.83
NEDD4-202ENST00000435532 SETXQ7Z333 2677 aaKnown RBP9.84□□□□□ -0.83
NEDD4-202ENST00000435532 A0A0G2JQZ4 141 aa9.84□□□□□ -0.83
NEDD4-202ENST00000435532 FLNAP21333 2647 aaKnown RBP9.82□□□□□ -0.84
NEDD4-202ENST00000435532 C1orf195Q5TG92 126 aa9.82□□□□□ -0.84
NEDD4-202ENST00000435532 ATRQ13535 2644 aa9.81□□□□□ -0.84
NEDD4-202ENST00000435532 ZNF292O60281 2723 aa9.79□□□□□ -0.84
NEDD4-202ENST00000435532 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
NEDD4-202ENST00000435532 Q5VSD8 79 aa9.78□□□□□ -0.84
NEDD4-202ENST00000435532 A0A1W2PNM2 257 aa9.77□□□□□ -0.84
NEDD4-202ENST00000435532 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
NEDD4-202ENST00000435532 KRTAP21-3Q3LHN1 58 aa9.76□□□□□ -0.85
NEDD4-202ENST00000435532 COA5Q86WW8 74 aa9.76□□□□□ -0.85
NEDD4-202ENST00000435532 IGLV8-61A0A075B6I0 122 aa9.75□□□□□ -0.85
NEDD4-202ENST00000435532 LINC01600Q96MT4 127 aa9.73□□□□□ -0.85
NEDD4-202ENST00000435532 M0R2T5 61 aa9.71□□□□□ -0.86
NEDD4-202ENST00000435532 DNAH12Q6ZR08 3092 aa9.66□□□□□ -0.86
NEDD4-202ENST00000435532 UQCR11O14957 56 aa9.66□□□□□ -0.86
NEDD4-202ENST00000435532 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.86
NEDD4-202ENST00000435532 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
NEDD4-202ENST00000435532 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
NEDD4-202ENST00000435532 TEP1Q99973 2627 aaKnown RBP9.64□□□□□ -0.87
NEDD4-202ENST00000435532 RPS28P62857 69 aaKnown RBP9.63□□□□□ -0.87
NEDD4-202ENST00000435532 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
NEDD4-202ENST00000435532 SPRR1AP35321 89 aa9.61□□□□□ -0.87
NEDD4-202ENST00000435532 Q8N1X5 172 aa9.61□□□□□ -0.87
NEDD4-202ENST00000435532 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
NEDD4-202ENST00000435532 CHD7Q9P2D1 2997 aa9.59□□□□□ -0.87
NEDD4-202ENST00000435532 OXTP01178 125 aa9.59□□□□□ -0.87
NEDD4-202ENST00000435532 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
NEDD4-202ENST00000435532 UNC79Q9P2D8 2635 aa9.58□□□□□ -0.88
NEDD4-202ENST00000435532 CENPEQ02224 2701 aa9.58□□□□□ -0.88
NEDD4-202ENST00000435532 Q6ZR54 194 aa9.57□□□□□ -0.88
NEDD4-202ENST00000435532 A8MUN3 132 aa9.57□□□□□ -0.88
NEDD4-202ENST00000435532 STAB1Q9NY15 2570 aa9.57□□□□□ -0.88
NEDD4-202ENST00000435532 SPRR1BP22528 89 aa9.56□□□□□ -0.88
NEDD4-202ENST00000435532 CHD6Q8TD26 2715 aa9.56□□□□□ -0.88
NEDD4-202ENST00000435532 CHD9Q3L8U1 2897 aa9.56□□□□□ -0.88
NEDD4-202ENST00000435532 KLKP1Q107X0 134 aa9.55□□□□□ -0.88
NEDD4-202ENST00000435532 LINC01554Q52M75 96 aa9.55□□□□□ -0.88
NEDD4-202ENST00000435532 SPANXA2-OT1Q8N9U9 137 aa9.54□□□□□ -0.88
NEDD4-202ENST00000435532 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
NEDD4-202ENST00000435532 KRTAP26-1Q6PEX3 210 aa9.53□□□□□ -0.88
NEDD4-202ENST00000435532 MIR22HGQ0VDD5 57 aa9.53□□□□□ -0.88
NEDD4-202ENST00000435532 UTRNP46939 3433 aa9.53□□□□□ -0.88
NEDD4-202ENST00000435532 PRRC2CQ9Y520 2896 aaKnown RBP9.51□□□□□ -0.89
NEDD4-202ENST00000435532 CRIPTQ9P021 101 aa9.51□□□□□ -0.89
NEDD4-202ENST00000435532 FP248Q71RG6 208 aaPredicted RBP9.5□□□□□ -0.89
NEDD4-202ENST00000435532 GCN1Q92616 2671 aaKnown RBP9.49□□□□□ -0.89
NEDD4-202ENST00000435532 IGSF10Q6WRI0 2623 aa9.48□□□□□ -0.89
NEDD4-202ENST00000435532 PRO0628Q9UI54 55 aa9.46□□□□□ -0.89
NEDD4-202ENST00000435532 COL6A5A8TX70 2615 aa9.46□□□□□ -0.89
NEDD4-202ENST00000435532 CSAG1Q6PB30 78 aa9.45□□□□□ -0.9
NEDD4-202ENST00000435532 SPINT4Q6UDR6 99 aa9.45□□□□□ -0.9
NEDD4-202ENST00000435532 S4R3F8 94 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms