RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
VRK2-206ENST00000435505 EP300Q09472 2414 aaPredicted RBP3.91□□□□□ -1.78
VRK2-206ENST00000435505 LOC101927531A0A1B0GV80 90 aa3.91□□□□□ -1.78
VRK2-206ENST00000435505 A6NDX4 124 aa3.91□□□□□ -1.78
VRK2-206ENST00000435505 ELOF1P60002 83 aaKnown RBP3.91□□□□□ -1.78
VRK2-206ENST00000435505 SPTAN1Q13813 2472 aaKnown RBP3.9□□□□□ -1.78
VRK2-206ENST00000435505 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.78
VRK2-206ENST00000435505 K7EQZ3 153 aa3.9□□□□□ -1.78
VRK2-206ENST00000435505 NDUFB1O75438 58 aa3.9□□□□□ -1.78
VRK2-206ENST00000435505 KRTAP19-4Q3LI73 84 aa3.9□□□□□ -1.79
VRK2-206ENST00000435505 NOP10Q9NPE3 64 aaKnown RBP3.9□□□□□ -1.79
VRK2-206ENST00000435505 NOTCH3Q9UM47 2321 aa3.9□□□□□ -1.79
VRK2-206ENST00000435505 CUBNO60494 3623 aa3.89□□□□□ -1.79
VRK2-206ENST00000435505 KRTAP24-1Q3LI83 254 aa3.89□□□□□ -1.79
VRK2-206ENST00000435505 AKAP9Q99996 3911 aa3.89□□□□□ -1.79
VRK2-206ENST00000435505 NBPF19A0A087WUL8 3843 aa3.89□□□□□ -1.79
VRK2-206ENST00000435505 DSCR10P59022 87 aa3.89□□□□□ -1.79
VRK2-206ENST00000435505 ITPR1Q14643 2758 aa3.88□□□□□ -1.79
VRK2-206ENST00000435505 VPS13CQ709C8 3753 aa3.88□□□□□ -1.79
VRK2-206ENST00000435505 ANKRD11Q6UB99 2663 aaPredicted RBP3.88□□□□□ -1.79
VRK2-206ENST00000435505 CREBBPQ92793 2442 aa3.88□□□□□ -1.79
VRK2-206ENST00000435505 A8MWP4 228 aa3.88□□□□□ -1.79
VRK2-206ENST00000435505 LINC01554Q52M75 96 aa3.88□□□□□ -1.79
VRK2-206ENST00000435505 IGLV10-54A0A075B6I4 117 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 SPINK7P58062 85 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 UNQ6190/PRO20217Q6UXQ8 127 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 COA5Q86WW8 74 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 DEFB136Q30KP8 78 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 SPANXA2-OT1Q8N9U9 137 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 WFDC10AQ9H1F0 79 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 KCNQ1DNQ9H478 68 aa3.87□□□□□ -1.79
VRK2-206ENST00000435505 A0A1W2PNM2 257 aa3.86□□□□□ -1.79
VRK2-206ENST00000435505 DEFB116Q30KQ4 102 aa3.86□□□□□ -1.79
VRK2-206ENST00000435505 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
VRK2-206ENST00000435505 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
VRK2-206ENST00000435505 KPRPQ5T749 579 aaPredicted RBP3.86□□□□□ -1.79
VRK2-206ENST00000435505 SPAG11BQ08648 103 aa3.85□□□□□ -1.79
VRK2-206ENST00000435505 PLAC8Q9NZF1 115 aa3.85□□□□□ -1.79
VRK2-206ENST00000435505 FAM168BA1KXE4 195 aa3.84□□□□□ -1.79
VRK2-206ENST00000435505 WFDC13Q8IUB5 93 aa3.84□□□□□ -1.79
VRK2-206ENST00000435505 DEFB105AQ8NG35 78 aa3.84□□□□□ -1.79
VRK2-206ENST00000435505 H0Y9P7 68 aa3.84□□□□□ -1.8
VRK2-206ENST00000435505 CASC2Q6XLA1 102 aa3.84□□□□□ -1.8
VRK2-206ENST00000435505 CYSRT1A8MQ03 144 aa3.83□□□□□ -1.8
VRK2-206ENST00000435505 SPAG11AQ6PDA7 123 aa3.83□□□□□ -1.8
VRK2-206ENST00000435505 Q8NAQ8 132 aa3.83□□□□□ -1.8
VRK2-206ENST00000435505 IGLV5-48A0A075B6I7 105 aa3.83□□□□□ -1.8
VRK2-206ENST00000435505 A0A096LPF7 62 aa3.83□□□□□ -1.8
VRK2-206ENST00000435505 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
VRK2-206ENST00000435505 WFDC10BQ8IUB3 73 aa3.82□□□□□ -1.8
VRK2-206ENST00000435505 C9orf163Q8N9P6 203 aa3.82□□□□□ -1.8
VRK2-206ENST00000435505 TRIOBPQ9H2D6 2365 aa3.82□□□□□ -1.8
VRK2-206ENST00000435505 OTOGQ6ZRI0 2925 aa3.82□□□□□ -1.8
VRK2-206ENST00000435505 IGKV2D-24A0A075B6R9 120 aa3.82□□□□□ -1.8
VRK2-206ENST00000435505 A0A0J9YWU9 116 aa3.82□□□□□ -1.8
VRK2-206ENST00000435505 B4DSR2 109 aa3.82□□□□□ -1.8
VRK2-206ENST00000435505 ACACAQ13085 2346 aa3.81□□□□□ -1.8
VRK2-206ENST00000435505 ANKRD17O75179 2603 aaKnown RBP3.81□□□□□ -1.8
VRK2-206ENST00000435505 SPG11Q96JI7 2443 aa3.81□□□□□ -1.8
VRK2-206ENST00000435505 C1orf137Q5JT78 98 aa3.81□□□□□ -1.8
VRK2-206ENST00000435505 PRO3102Q9H379 93 aa3.81□□□□□ -1.8
VRK2-206ENST00000435505 C6orf48Q9UBA6 75 aa3.81□□□□□ -1.8
VRK2-206ENST00000435505 ANGP03950 147 aaKnown RBP3.81□□□□□ -1.8
VRK2-206ENST00000435505 GVINP1Q7Z2Y8 2422 aa3.81□□□□□ -1.8
VRK2-206ENST00000435505 K7ERS5 55 aa3.8□□□□□ -1.8
VRK2-206ENST00000435505 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
VRK2-206ENST00000435505 DEFB124Q8NES8 71 aa3.8□□□□□ -1.8
VRK2-206ENST00000435505 SPRR4Q96PI1 79 aa3.8□□□□□ -1.8
VRK2-206ENST00000435505 SETXQ7Z333 2677 aaKnown RBP3.79□□□□□ -1.8
VRK2-206ENST00000435505 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
VRK2-206ENST00000435505 A0A1B0GW54 56 aa3.79□□□□□ -1.8
VRK2-206ENST00000435505 APCP25054 2843 aa3.79□□□□□ -1.8
VRK2-206ENST00000435505 H3BPC8 53 aa3.79□□□□□ -1.8
VRK2-206ENST00000435505 DEFB112Q30KQ8 113 aa3.79□□□□□ -1.8
VRK2-206ENST00000435505 JMJD1CQ15652 2540 aa3.78□□□□□ -1.8
VRK2-206ENST00000435505 GVQW2A0A096LPI5 108 aaPredicted RBP3.78□□□□□ -1.8
VRK2-206ENST00000435505 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
VRK2-206ENST00000435505 TLN1Q9Y490 2541 aaKnown RBP3.78□□□□□ -1.81
VRK2-206ENST00000435505 A8MUU9 505 aa3.78□□□□□ -1.81
VRK2-206ENST00000435505 DEFB130BP0DP73 79 aa3.78□□□□□ -1.81
VRK2-206ENST00000435505 DEFB130AP0DP74 79 aa3.78□□□□□ -1.81
VRK2-206ENST00000435505 RPL37AP61513 92 aaKnown RBP3.78□□□□□ -1.81
VRK2-206ENST00000435505 CNBPP62633 177 aaKnown RBP3.78□□□□□ -1.81
VRK2-206ENST00000435505 RIF1Q5UIP0 2472 aaKnown RBP3.77□□□□□ -1.81
VRK2-206ENST00000435505 CELSR2Q9HCU4 2923 aa3.77□□□□□ -1.81
VRK2-206ENST00000435505 NF1P21359 2839 aa3.77□□□□□ -1.81
VRK2-206ENST00000435505 A0A0G2JQZ4 141 aa3.76□□□□□ -1.81
VRK2-206ENST00000435505 A0A1W2PNN7 141 aa3.76□□□□□ -1.81
VRK2-206ENST00000435505 PCOTHQ58A44 107 aa3.76□□□□□ -1.81
VRK2-206ENST00000435505 RETNLBQ9BQ08 111 aa3.76□□□□□ -1.81
VRK2-206ENST00000435505 NIPBLQ6KC79 2804 aaeCLIP3.76□□□□□ -1.81
VRK2-206ENST00000435505 ATRXP46100 2492 aa3.76□□□□□ -1.81
VRK2-206ENST00000435505 RTL8CO15255 209 aa3.75□□□□□ -1.81
VRK2-206ENST00000435505 CSPG4Q6UVK1 2322 aa3.75□□□□□ -1.81
VRK2-206ENST00000435505 NCOR2Q9Y618 2525 aa3.75□□□□□ -1.81
VRK2-206ENST00000435505 TLN2Q9Y4G6 2542 aa3.75□□□□□ -1.81
VRK2-206ENST00000435505 TEX15Q9BXT5 2789 aa3.75□□□□□ -1.81
VRK2-206ENST00000435505 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
VRK2-206ENST00000435505 NBASA2RRP1 2371 aa3.75□□□□□ -1.81
VRK2-206ENST00000435505 KRTAP7-1Q8IUC3 87 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms