RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 KCNQ1DNQ9H478 68 aa8.35□□□□□ -1.07
DDX56-204ENST00000431640 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
DDX56-204ENST00000431640 LOC107984640A0A0U1RRK4 108 aa8.34□□□□□ -1.07
DDX56-204ENST00000431640 CASC10Q5T4H9 136 aa8.34□□□□□ -1.07
DDX56-204ENST00000431640 LOC110117498A0A087WWA1 95 aa8.33□□□□□ -1.08
DDX56-204ENST00000431640 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
DDX56-204ENST00000431640 LINC00846Q9NV44 126 aa8.32□□□□□ -1.08
DDX56-204ENST00000431640 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
DDX56-204ENST00000431640 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
DDX56-204ENST00000431640 DSCR8Q96T75 97 aa8.31□□□□□ -1.08
DDX56-204ENST00000431640 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
DDX56-204ENST00000431640 Q6JHZ5 121 aa8.31□□□□□ -1.08
DDX56-204ENST00000431640 PRYO14603 147 aa8.3□□□□□ -1.08
DDX56-204ENST00000431640 C14orf177Q52M58 125 aa8.3□□□□□ -1.08
DDX56-204ENST00000431640 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
DDX56-204ENST00000431640 PSCAO43653 123 aa8.29□□□□□ -1.08
DDX56-204ENST00000431640 Q6ZQT0 140 aa8.29□□□□□ -1.08
DDX56-204ENST00000431640 KRTAP1-5Q9BYS1 174 aa8.28□□□□□ -1.08
DDX56-204ENST00000431640 IGLV1-50A0A075B6I6 118 aa8.27□□□□□ -1.09
DDX56-204ENST00000431640 C3orf84H3BNL1 204 aa8.27□□□□□ -1.09
DDX56-204ENST00000431640 CNBPP62633 177 aaKnown RBP8.27□□□□□ -1.09
DDX56-204ENST00000431640 DHRS4-AS1Q9P1J3 65 aa8.27□□□□□ -1.09
DDX56-204ENST00000431640 KMT2AQ03164 3969 aa8.27□□□□□ -1.09
DDX56-204ENST00000431640 ATP5EP2Q5VTU8 51 aa8.27□□□□□ -1.09
DDX56-204ENST00000431640 UBL5Q9BZL1 73 aa8.27□□□□□ -1.09
DDX56-204ENST00000431640 SPRR1AP35321 89 aa8.25□□□□□ -1.09
DDX56-204ENST00000431640 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
DDX56-204ENST00000431640 PKIGQ9Y2B9 76 aa8.25□□□□□ -1.09
DDX56-204ENST00000431640 ETDCA0A1B0GVM5 59 aa8.24□□□□□ -1.09
DDX56-204ENST00000431640 HYDINQ4G0P3 5121 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 TRBV7-4A0A0J9YYF1 115 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 FAM236AA0A1B0GUQ0 79 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 FAM236BA0A1B0GV22 79 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 C16orf90A8MZG2 172 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 B5MCH6 92 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 Q6ZRX8 168 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 LINC00476Q8WZB0 136 aa8.23□□□□□ -1.09
DDX56-204ENST00000431640 RPL37AP8A6NKH3 93 aa8.22□□□□□ -1.09
DDX56-204ENST00000431640 KRTAP4-16G5E9R7 235 aaPredicted RBP8.22□□□□□ -1.09
DDX56-204ENST00000431640 IGKV3D-7A0A0C4DH55 119 aa8.22□□□□□ -1.09
DDX56-204ENST00000431640 NBDYA0A0U1RRE5 68 aa8.21□□□□□ -1.1
DDX56-204ENST00000431640 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.1
DDX56-204ENST00000431640 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
DDX56-204ENST00000431640 DNAH6Q9C0G6 4158 aa8.21□□□□□ -1.1
DDX56-204ENST00000431640 DNAH10Q8IVF4 4471 aa8.21□□□□□ -1.1
DDX56-204ENST00000431640 REG3GQ6UW15 175 aa8.19□□□□□ -1.1
DDX56-204ENST00000431640 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
DDX56-204ENST00000431640 KMT2CQ8NEZ4 4911 aaKnown RBP8.19□□□□□ -1.1
DDX56-204ENST00000431640 LY6G6CO95867 125 aa8.18□□□□□ -1.1
DDX56-204ENST00000431640 ATOX1O00244 68 aa8.18□□□□□ -1.1
DDX56-204ENST00000431640 HIST1H4AP62805 103 aaKnown RBP8.18□□□□□ -1.1
DDX56-204ENST00000431640 Q8N377 158 aa8.18□□□□□ -1.1
DDX56-204ENST00000431640 A0A096LNI7 61 aa8.17□□□□□ -1.1
DDX56-204ENST00000431640 DEFB105AQ8NG35 78 aa8.16□□□□□ -1.1
DDX56-204ENST00000431640 Q9BRP9 147 aa8.16□□□□□ -1.1
DDX56-204ENST00000431640 IGLV5-48A0A075B6I7 105 aa8.15□□□□□ -1.1
DDX56-204ENST00000431640 A0A1B0GW54 56 aa8.15□□□□□ -1.1
DDX56-204ENST00000431640 M0R2N4 97 aa8.15□□□□□ -1.1
DDX56-204ENST00000431640 Q6ZR54 194 aa8.15□□□□□ -1.1
DDX56-204ENST00000431640 Q6ZVQ6 151 aa8.15□□□□□ -1.1
DDX56-204ENST00000431640 C9orf163Q8N9P6 203 aa8.15□□□□□ -1.1
DDX56-204ENST00000431640 DNAH2Q9P225 4427 aa8.15□□□□□ -1.1
DDX56-204ENST00000431640 IGKV2-24A0A0C4DH68 120 aa8.14□□□□□ -1.11
DDX56-204ENST00000431640 LRCOL1A6NCL2 159 aa8.14□□□□□ -1.11
DDX56-204ENST00000431640 LINC01547P58512 204 aaPredicted RBP8.14□□□□□ -1.11
DDX56-204ENST00000431640 UBE2BP63146 152 aa8.14□□□□□ -1.11
DDX56-204ENST00000431640 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
DDX56-204ENST00000431640 RYR2Q92736 4967 aa8.14□□□□□ -1.11
DDX56-204ENST00000431640 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
DDX56-204ENST00000431640 CXCL6P80162 114 aa8.14□□□□□ -1.11
DDX56-204ENST00000431640 FRAS1Q86XX4 4008 aa8.13□□□□□ -1.11
DDX56-204ENST00000431640 A0A1W2PNN7 141 aa8.13□□□□□ -1.11
DDX56-204ENST00000431640 CCDC179H3BU77 68 aa8.13□□□□□ -1.11
DDX56-204ENST00000431640 Q6ZRN7 208 aaPredicted RBP8.13□□□□□ -1.11
DDX56-204ENST00000431640 LCE6AA0A183 80 aa8.12□□□□□ -1.11
DDX56-204ENST00000431640 HAMPP81172 84 aa8.12□□□□□ -1.11
DDX56-204ENST00000431640 UQCRQO14949 82 aa8.11□□□□□ -1.11
DDX56-204ENST00000431640 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
DDX56-204ENST00000431640 A0A087WVE0 104 aa8.1□□□□□ -1.11
DDX56-204ENST00000431640 COX7CP15954 63 aa8.1□□□□□ -1.11
DDX56-204ENST00000431640 BCE1O60756 84 aa8.09□□□□□ -1.11
DDX56-204ENST00000431640 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
DDX56-204ENST00000431640 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
DDX56-204ENST00000431640 ST20-AS1Q8NBB2 130 aa8.09□□□□□ -1.11
DDX56-204ENST00000431640 H0Y9J4 135 aa8.08□□□□□ -1.12
DDX56-204ENST00000431640 NREPQ16612 68 aa8.08□□□□□ -1.12
DDX56-204ENST00000431640 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
DDX56-204ENST00000431640 TNP2Q05952 138 aa8.07□□□□□ -1.12
DDX56-204ENST00000431640 C1orf137Q5JT78 98 aa8.06□□□□□ -1.12
DDX56-204ENST00000431640 SERP2Q8N6R1 65 aa8.06□□□□□ -1.12
DDX56-204ENST00000431640 RYR3Q15413 4870 aa8.06□□□□□ -1.12
DDX56-204ENST00000431640 F8WEM9 126 aa8.05□□□□□ -1.12
DDX56-204ENST00000431640 PHF5AQ7RTV0 110 aaKnown RBP8.05□□□□□ -1.12
DDX56-204ENST00000431640 DNAH17Q9UFH2 4485 aa8.04□□□□□ -1.12
DDX56-204ENST00000431640 RTL8CO15255 209 aa8.04□□□□□ -1.12
DDX56-204ENST00000431640 CHTF8P0CG12 524 aa8.04□□□□□ -1.12
DDX56-204ENST00000431640 C9orf153Q5TBE3 101 aa8.04□□□□□ -1.12
DDX56-204ENST00000431640 DPH3Q96FX2 82 aa8.04□□□□□ -1.12
DDX56-204ENST00000431640 FAT2Q9NYQ8 4349 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms