RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 LINC00337Q8N6G1 96 aa10.32□□□□□ -0.76
TTC28-202ENST00000431039 C7orf33Q8WU49 177 aa10.32□□□□□ -0.76
TTC28-202ENST00000431039 NHP2Q9NX24 153 aaKnown RBP10.31□□□□□ -0.76
TTC28-202ENST00000431039 TNXBP22105 4242 aa10.31□□□□□ -0.76
TTC28-202ENST00000431039 IGLV6-57P01721 117 aa10.3□□□□□ -0.76
TTC28-202ENST00000431039 MT1HL1P0DM35 61 aa10.3□□□□□ -0.76
TTC28-202ENST00000431039 RAB37Q96AX2 223 aa10.3□□□□□ -0.76
TTC28-202ENST00000431039 LINC00167Q96N53 147 aa10.3□□□□□ -0.76
TTC28-202ENST00000431039 A6NDN8 102 aa10.29□□□□□ -0.76
TTC28-202ENST00000431039 S100A7L2Q5SY68 101 aa10.29□□□□□ -0.76
TTC28-202ENST00000431039 PHF5AQ7RTV0 110 aaKnown RBP10.29□□□□□ -0.76
TTC28-202ENST00000431039 TMEM126AQ9H061 195 aa10.29□□□□□ -0.76
TTC28-202ENST00000431039 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
TTC28-202ENST00000431039 BATFQ16520 125 aa10.28□□□□□ -0.76
TTC28-202ENST00000431039 OR13C6PQ8NH95 151 aa10.28□□□□□ -0.76
TTC28-202ENST00000431039 SNHG12Q9BXW3 62 aa10.28□□□□□ -0.76
TTC28-202ENST00000431039 PRO1854Q9UHT4 67 aa10.28□□□□□ -0.76
TTC28-202ENST00000431039 IGLV1-50A0A075B6I6 118 aa10.27□□□□□ -0.77
TTC28-202ENST00000431039 TRBV10-3A0A0K0K1G6 114 aa10.27□□□□□ -0.77
TTC28-202ENST00000431039 K7ERJ3 54 aa10.26□□□□□ -0.77
TTC28-202ENST00000431039 CBY1Q9Y3M2 126 aa10.26□□□□□ -0.77
TTC28-202ENST00000431039 RPL13AP40429 203 aaKnown RBP10.25□□□□□ -0.77
TTC28-202ENST00000431039 RNF213Q63HN8 5207 aa10.24□□□□□ -0.77
TTC28-202ENST00000431039 RPL37AP8A6NKH3 93 aa10.24□□□□□ -0.77
TTC28-202ENST00000431039 KCNQ1DNQ9H478 68 aa10.24□□□□□ -0.77
TTC28-202ENST00000431039 LRP2P98164 4655 aa10.24□□□□□ -0.77
TTC28-202ENST00000431039 UBE2BP63146 152 aa10.23□□□□□ -0.77
TTC28-202ENST00000431039 TRAV23DV6A0A075B6W5 121 aa10.21□□□□□ -0.77
TTC28-202ENST00000431039 PRYO14603 147 aa10.21□□□□□ -0.77
TTC28-202ENST00000431039 KRTAP11-1Q8IUC1 163 aa10.21□□□□□ -0.77
TTC28-202ENST00000431039 SMIM11BQ8TCY0 68 aa10.21□□□□□ -0.77
TTC28-202ENST00000431039 H7C2G1 150 aa10.19□□□□□ -0.78
TTC28-202ENST00000431039 SPRR1AP35321 89 aa10.19□□□□□ -0.78
TTC28-202ENST00000431039 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
TTC28-202ENST00000431039 COL5A1-AS1Q5SY13 56 aa10.19□□□□□ -0.78
TTC28-202ENST00000431039 ZNF73O43830 326 aaPredicted RBP10.18□□□□□ -0.78
TTC28-202ENST00000431039 TSPAN13O95857 204 aa10.18□□□□□ -0.78
TTC28-202ENST00000431039 Q1RN00 199 aa10.18□□□□□ -0.78
TTC28-202ENST00000431039 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
TTC28-202ENST00000431039 TAX1BP3O14907 124 aa10.16□□□□□ -0.78
TTC28-202ENST00000431039 DIRC1Q969H9 104 aa10.16□□□□□ -0.78
TTC28-202ENST00000431039 KRTAP4-16G5E9R7 235 aaPredicted RBP10.15□□□□□ -0.78
TTC28-202ENST00000431039 C6orf99Q4VX62 202 aa10.15□□□□□ -0.78
TTC28-202ENST00000431039 PSORS1C2Q9UIG4 136 aa10.15□□□□□ -0.78
TTC28-202ENST00000431039 TRBV7-6A0A0J9YX20 115 aa10.14□□□□□ -0.79
TTC28-202ENST00000431039 BCE1O60756 84 aa10.13□□□□□ -0.79
TTC28-202ENST00000431039 VAMP3Q15836 100 aa10.13□□□□□ -0.79
TTC28-202ENST00000431039 ETDCA0A1B0GVM5 59 aa10.12□□□□□ -0.79
TTC28-202ENST00000431039 C9orf118A6NHY6 69 aa10.12□□□□□ -0.79
TTC28-202ENST00000431039 TRIAP1O43715 76 aa10.12□□□□□ -0.79
TTC28-202ENST00000431039 PSMB2P49721 201 aa10.12□□□□□ -0.79
TTC28-202ENST00000431039 B5MCH6 92 aa10.1□□□□□ -0.79
TTC28-202ENST00000431039 H0YGX0 51 aa10.1□□□□□ -0.79
TTC28-202ENST00000431039 COX6CP09669 75 aa10.1□□□□□ -0.79
TTC28-202ENST00000431039 COX7BP24311 80 aa10.1□□□□□ -0.79
TTC28-202ENST00000431039 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
TTC28-202ENST00000431039 H0Y9J4 135 aa10.09□□□□□ -0.79
TTC28-202ENST00000431039 ELOF1P60002 83 aaKnown RBP10.09□□□□□ -0.79
TTC28-202ENST00000431039 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
TTC28-202ENST00000431039 LINC01600Q96MT4 127 aa10.09□□□□□ -0.79
TTC28-202ENST00000431039 H3BUT2 72 aa10.08□□□□□ -0.8
TTC28-202ENST00000431039 NAA38Q9BRA0 125 aaKnown RBP10.08□□□□□ -0.8
TTC28-202ENST00000431039 SCGB1C2P0DMR2 95 aa10.07□□□□□ -0.8
TTC28-202ENST00000431039 Q6ZRX8 168 aa10.07□□□□□ -0.8
TTC28-202ENST00000431039 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
TTC28-202ENST00000431039 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
TTC28-202ENST00000431039 UBE2AP49459 152 aa10.06□□□□□ -0.8
TTC28-202ENST00000431039 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
TTC28-202ENST00000431039 A0A1W2PPM0 123 aa10.04□□□□□ -0.8
TTC28-202ENST00000431039 ZNF861PO60384 105 aa10.04□□□□□ -0.8
TTC28-202ENST00000431039 PRLHP81277 87 aa10.04□□□□□ -0.8
TTC28-202ENST00000431039 LINC00575Q6W349 94 aa10.04□□□□□ -0.8
TTC28-202ENST00000431039 DHRS4-AS1Q9P1J3 65 aa10.04□□□□□ -0.8
TTC28-202ENST00000431039 A0A1B0GX51 115 aa10.02□□□□□ -0.81
TTC28-202ENST00000431039 FABP2P12104 132 aa10.02□□□□□ -0.81
TTC28-202ENST00000431039 Q9BRP9 147 aa10.02□□□□□ -0.81
TTC28-202ENST00000431039 SLC25A20O43772 301 aa10.01□□□□□ -0.81
TTC28-202ENST00000431039 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
TTC28-202ENST00000431039 SMCR5Q8TEV8 140 aa10.01□□□□□ -0.81
TTC28-202ENST00000431039 CLEC2BQ92478 149 aa10.01□□□□□ -0.81
TTC28-202ENST00000431039 FAM218AQ96MZ4 157 aa10.01□□□□□ -0.81
TTC28-202ENST00000431039 hADV29S1A0JD25 119 aa10□□□□□ -0.81
TTC28-202ENST00000431039 KRTAP10-8P60410 259 aa10□□□□□ -0.81
TTC28-202ENST00000431039 TRBV20-1A0A075B6N2 111 aa9.99□□□□□ -0.81
TTC28-202ENST00000431039 SNCGO76070 127 aa9.99□□□□□ -0.81
TTC28-202ENST00000431039 HIGD2AQ9BW72 106 aa9.99□□□□□ -0.81
TTC28-202ENST00000431039 LST1O00453 97 aa9.98□□□□□ -0.81
TTC28-202ENST00000431039 ERC2-IT1O76042 136 aa9.97□□□□□ -0.81
TTC28-202ENST00000431039 TCL1BO95988 128 aa9.97□□□□□ -0.81
TTC28-202ENST00000431039 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
TTC28-202ENST00000431039 TRACP01848 142 aa9.96□□□□□ -0.82
TTC28-202ENST00000431039 LPAP08519 4548 aa9.95□□□□□ -0.82
TTC28-202ENST00000431039 SPCS1Q9Y6A9 102 aa9.95□□□□□ -0.82
TTC28-202ENST00000431039 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.94□□□□□ -0.82
TTC28-202ENST00000431039 K7EP34 96 aa9.91□□□□□ -0.82
TTC28-202ENST00000431039 DNAL4O96015 105 aa9.91□□□□□ -0.82
TTC28-202ENST00000431039 Q6ZQY7 126 aa9.91□□□□□ -0.82
TTC28-202ENST00000431039 OCIAD2Q56VL3 154 aa9.9□□□□□ -0.82
TTC28-202ENST00000431039 ST20-AS1Q8NBB2 130 aa9.9□□□□□ -0.82
TTC28-202ENST00000431039 ZNF706Q9Y5V0 76 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms