RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 Q6ZVH6 145 aa4.72□□□□□ -1.65
ECHDC1-207ENST00000430841 HIST1H4GQ99525 98 aa4.72□□□□□ -1.65
ECHDC1-207ENST00000430841 TRBV20-1A0A075B6N2 111 aa4.71□□□□□ -1.66
ECHDC1-207ENST00000430841 IGLV5-45A0A087WSX0 123 aa4.71□□□□□ -1.66
ECHDC1-207ENST00000430841 IGIPA6NJ69 53 aa4.71□□□□□ -1.66
ECHDC1-207ENST00000430841 FXYD2P54710 66 aa4.71□□□□□ -1.66
ECHDC1-207ENST00000430841 RPL24P83731 157 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-207ENST00000430841 C5orf38Q86SI9 138 aa4.71□□□□□ -1.66
ECHDC1-207ENST00000430841 PYGO1Q9Y3Y4 419 aa4.71□□□□□ -1.66
ECHDC1-207ENST00000430841 TYMSOSQ8TAI1 123 aa4.7□□□□□ -1.66
ECHDC1-207ENST00000430841 CDC42SE2Q9NRR3 84 aa4.7□□□□□ -1.66
ECHDC1-207ENST00000430841 NHP2Q9NX24 153 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-207ENST00000430841 ZNF815PA8K554 130 aa4.69□□□□□ -1.66
ECHDC1-207ENST00000430841 RNASE13Q5GAN3 156 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-207ENST00000430841 SCGB1D4Q6XE38 83 aa4.69□□□□□ -1.66
ECHDC1-207ENST00000430841 RAB37Q96AX2 223 aa4.69□□□□□ -1.66
ECHDC1-207ENST00000430841 PLEKHB2Q96CS7 222 aa4.69□□□□□ -1.66
ECHDC1-207ENST00000430841 FAM168BA1KXE4 195 aa4.68□□□□□ -1.66
ECHDC1-207ENST00000430841 LEPROTO15243 131 aa4.68□□□□□ -1.66
ECHDC1-207ENST00000430841 TSHBP01222 138 aa4.68□□□□□ -1.66
ECHDC1-207ENST00000430841 CRYGAP11844 174 aa4.68□□□□□ -1.66
ECHDC1-207ENST00000430841 TMEM238C9JI98 176 aa4.67□□□□□ -1.66
ECHDC1-207ENST00000430841 H3BMG7 143 aa4.67□□□□□ -1.66
ECHDC1-207ENST00000430841 KRTAP1-4P0C5Y4 121 aa4.67□□□□□ -1.66
ECHDC1-207ENST00000430841 LGALS3P17931 250 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-207ENST00000430841 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-207ENST00000430841 A0A0U1RRA0 63 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 J3QQQ9 107 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 ZNF861PO60384 105 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 LINC01547P58512 204 aaPredicted RBP4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 HERV-K104P63124 156 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 Q6ZUT4 128 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 MTURNQ8N3F0 131 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 COPS9Q8WXC6 57 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 SPANXA1Q9NS26 97 aa4.66□□□□□ -1.66
ECHDC1-207ENST00000430841 A0A0B4J2C4 111 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 A0A0J9YXY3 114 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 TMEM223A0PJW6 202 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 TLX1NBP0CAT3 122 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 AMELXQ99217 191 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 SIGMAR1Q99720 223 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 TIMM21Q9BVV7 248 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 PPDPFQ9H3Y8 114 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 PRO1854Q9UHT4 67 aa4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 CSDC2Q9Y534 153 aaKnown RBP4.65□□□□□ -1.67
ECHDC1-207ENST00000430841 TRBV30A0A0K0K1B3 111 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 NDUFC2-KCTD14E9PQ53 114 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 TIMM17BO60830 172 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 MRPS36P82909 103 aaKnown RBP4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 UNQ6190/PRO20217Q6UXQ8 127 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 LINC00304Q8N9R0 145 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 RETNLBQ9BQ08 111 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 TTTY13Q9BZ97 58 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 UBE2D4Q9Y2X8 147 aa4.64□□□□□ -1.67
ECHDC1-207ENST00000430841 IGLV7-46A0A075B6I9 117 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 IFITM1P13164 125 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 UBE2AP49459 152 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 CKS1BP61024 79 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 TPRXLQ17RH7 258 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 LINC00337Q8N6G1 96 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 C6orf48Q9UBA6 75 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
ECHDC1-207ENST00000430841 IGLV4-3A0A075B6K6 122 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 IGLV9-49A0A0B4J1Y8 123 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 K7ERJ3 54 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 COX6CP09669 75 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 FAM19A3Q7Z5A8 133 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 PPDPFLQ8WWR9 84 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 SPANXDQ9BXN6 97 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 SPANXCQ9NY87 97 aa4.62□□□□□ -1.67
ECHDC1-207ENST00000430841 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 CFC1P0CG37 223 aa4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 ZNF22P17026 224 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 RPL39P62891 51 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 TEN1Q86WV5 123 aa4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 KRTAP11-1Q8IUC1 163 aa4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 NAA38Q9BRA0 125 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 TOMM7Q9P0U1 55 aa4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 ERG28Q9UKR5 140 aa4.61□□□□□ -1.67
ECHDC1-207ENST00000430841 LOC107984156A0A0G2JMH3 177 aa4.6□□□□□ -1.67
ECHDC1-207ENST00000430841 BCE1O60756 84 aa4.6□□□□□ -1.67
ECHDC1-207ENST00000430841 SCGB1C2P0DMR2 95 aa4.6□□□□□ -1.67
ECHDC1-207ENST00000430841 HERVK_113P63121 156 aa4.6□□□□□ -1.67
ECHDC1-207ENST00000430841 ETDBQ3ZM63 59 aa4.6□□□□□ -1.67
ECHDC1-207ENST00000430841 ARL17AQ8IVW1 177 aa4.6□□□□□ -1.67
ECHDC1-207ENST00000430841 A0A087X002 238 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 IGHV3OR16-9A0A0B4J2B5 98 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 PSMB2P49721 201 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 ATXN8Q156A1 80 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 C6orf226Q5I0X4 101 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 SFTA2Q6UW10 78 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 MRPL55Q7Z7F7 128 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 NKAPP1Q8N9T2 125 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 GEMIN7Q9H840 131 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 C22orf24Q9Y442 160 aa4.59□□□□□ -1.67
ECHDC1-207ENST00000430841 A0A1B0GV72 72 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms