RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 RPL13AP40429 203 aaKnown RBP6.79□□□□□ -1.32
CHD4-202ENST00000430771 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
CHD4-202ENST00000430771 ZNF73O43830 326 aaPredicted RBP6.78□□□□□ -1.32
CHD4-202ENST00000430771 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
CHD4-202ENST00000430771 SPRR1AP35321 89 aa6.78□□□□□ -1.32
CHD4-202ENST00000430771 UBE2AP49459 152 aa6.78□□□□□ -1.32
CHD4-202ENST00000430771 CTAG1AP78358 180 aa6.78□□□□□ -1.32
CHD4-202ENST00000430771 FAM19A1Q7Z5A9 133 aa6.78□□□□□ -1.32
CHD4-202ENST00000430771 DIRC1Q969H9 104 aa6.78□□□□□ -1.32
CHD4-202ENST00000430771 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
CHD4-202ENST00000430771 HINT1P49773 126 aaPredicted RBP6.77□□□□□ -1.33
CHD4-202ENST00000430771 NHP2Q9NX24 153 aaKnown RBP6.77□□□□□ -1.33
CHD4-202ENST00000430771 CFC1BP0CG36 223 aa6.76□□□□□ -1.33
CHD4-202ENST00000430771 CFC1P0CG37 223 aa6.76□□□□□ -1.33
CHD4-202ENST00000430771 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
CHD4-202ENST00000430771 ZNF861PO60384 105 aa6.75□□□□□ -1.33
CHD4-202ENST00000430771 PRLHP81277 87 aa6.75□□□□□ -1.33
CHD4-202ENST00000430771 Q1RN00 199 aa6.75□□□□□ -1.33
CHD4-202ENST00000430771 BVES-AS1Q5T3Y7 98 aa6.75□□□□□ -1.33
CHD4-202ENST00000430771 PKHD1L1Q86WI1 4243 aa6.74□□□□□ -1.33
CHD4-202ENST00000430771 H0Y9J4 135 aa6.74□□□□□ -1.33
CHD4-202ENST00000430771 C6orf99Q4VX62 202 aa6.74□□□□□ -1.33
CHD4-202ENST00000430771 Q6ZRX8 168 aa6.74□□□□□ -1.33
CHD4-202ENST00000430771 PRO1854Q9UHT4 67 aa6.74□□□□□ -1.33
CHD4-202ENST00000430771 TRBV7-6A0A0J9YX20 115 aa6.73□□□□□ -1.33
CHD4-202ENST00000430771 A0A1B0GWB2 263 aa6.73□□□□□ -1.33
CHD4-202ENST00000430771 KRTAP4-16G5E9R7 235 aaPredicted RBP6.73□□□□□ -1.33
CHD4-202ENST00000430771 H7C2G1 150 aa6.73□□□□□ -1.33
CHD4-202ENST00000430771 SPINK6Q6UWN8 80 aa6.73□□□□□ -1.33
CHD4-202ENST00000430771 KRTAP13-1Q8IUC0 172 aa6.73□□□□□ -1.33
CHD4-202ENST00000430771 SMIM11BQ8TCY0 68 aa6.73□□□□□ -1.33
CHD4-202ENST00000430771 B5MCH6 92 aa6.72□□□□□ -1.33
CHD4-202ENST00000430771 K7ERJ3 54 aa6.72□□□□□ -1.33
CHD4-202ENST00000430771 COX7BP24311 80 aa6.72□□□□□ -1.33
CHD4-202ENST00000430771 ELOF1P60002 83 aaKnown RBP6.72□□□□□ -1.33
CHD4-202ENST00000430771 KRTAP4-5Q9BYR2 181 aa6.72□□□□□ -1.33
CHD4-202ENST00000430771 VAMP3Q15836 100 aa6.71□□□□□ -1.34
CHD4-202ENST00000430771 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
CHD4-202ENST00000430771 BATFQ16520 125 aa6.7□□□□□ -1.34
CHD4-202ENST00000430771 DHRS4-AS1Q9P1J3 65 aa6.69□□□□□ -1.34
CHD4-202ENST00000430771 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
CHD4-202ENST00000430771 TSPAN13O95857 204 aa6.68□□□□□ -1.34
CHD4-202ENST00000430771 INAFM2P0DMQ5 153 aa6.68□□□□□ -1.34
CHD4-202ENST00000430771 SLC25A20O43772 301 aa6.67□□□□□ -1.34
CHD4-202ENST00000430771 PSMB2P49721 201 aa6.67□□□□□ -1.34
CHD4-202ENST00000430771 SMCR5Q8TEV8 140 aa6.67□□□□□ -1.34
CHD4-202ENST00000430771 Q9BRP9 147 aa6.67□□□□□ -1.34
CHD4-202ENST00000430771 PCP4L1A6NKN8 68 aa6.66□□□□□ -1.34
CHD4-202ENST00000430771 H0YGX0 51 aa6.66□□□□□ -1.34
CHD4-202ENST00000430771 COX6CP09669 75 aa6.66□□□□□ -1.34
CHD4-202ENST00000430771 TRIAP1O43715 76 aa6.65□□□□□ -1.34
CHD4-202ENST00000430771 SNCGO76070 127 aa6.65□□□□□ -1.34
CHD4-202ENST00000430771 SRRM2Q9UQ35 2752 aaKnown RBP6.64□□□□□ -1.35
CHD4-202ENST00000430771 ABCA13Q86UQ4 5058 aa6.64□□□□□ -1.35
CHD4-202ENST00000430771 LYRM7Q5U5X0 104 aa6.63□□□□□ -1.35
CHD4-202ENST00000430771 LINC00575Q6W349 94 aa6.63□□□□□ -1.35
CHD4-202ENST00000430771 SPRR4Q96PI1 79 aa6.63□□□□□ -1.35
CHD4-202ENST00000430771 A0A1B0GX51 115 aa6.62□□□□□ -1.35
CHD4-202ENST00000430771 hADV29S1A0JD25 119 aa6.62□□□□□ -1.35
CHD4-202ENST00000430771 ERC2-IT1O76042 136 aa6.62□□□□□ -1.35
CHD4-202ENST00000430771 SNHG12Q9BXW3 62 aa6.62□□□□□ -1.35
CHD4-202ENST00000430771 SCGB1C2P0DMR2 95 aa6.61□□□□□ -1.35
CHD4-202ENST00000430771 KRTAP1-4P0C5Y4 121 aa6.6□□□□□ -1.35
CHD4-202ENST00000430771 FAM229BQ4G0N7 80 aa6.6□□□□□ -1.35
CHD4-202ENST00000430771 COL5A1-AS1Q5SY13 56 aa6.6□□□□□ -1.35
CHD4-202ENST00000430771 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
CHD4-202ENST00000430771 DNAL4O96015 105 aa6.59□□□□□ -1.35
CHD4-202ENST00000430771 OXTP01178 125 aa6.59□□□□□ -1.35
CHD4-202ENST00000430771 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
CHD4-202ENST00000430771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.59□□□□□ -1.35
CHD4-202ENST00000430771 FLG2Q5D862 2391 aaPredicted RBP6.58□□□□□ -1.36
CHD4-202ENST00000430771 GHRHP01286 108 aa6.58□□□□□ -1.36
CHD4-202ENST00000430771 Q6ZQY7 126 aa6.58□□□□□ -1.36
CHD4-202ENST00000430771 ST20-AS1Q8NBB2 130 aa6.58□□□□□ -1.36
CHD4-202ENST00000430771 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
CHD4-202ENST00000430771 FAM218AQ96MZ4 157 aa6.58□□□□□ -1.36
CHD4-202ENST00000430771 FAT3Q8TDW7 4589 aa6.58□□□□□ -1.36
CHD4-202ENST00000430771 IGLV5-48A0A075B6I7 105 aa6.57□□□□□ -1.36
CHD4-202ENST00000430771 C9orf118A6NHY6 69 aa6.57□□□□□ -1.36
CHD4-202ENST00000430771 H3BUT2 72 aa6.57□□□□□ -1.36
CHD4-202ENST00000430771 TAX1BP3O14907 124 aa6.57□□□□□ -1.36
CHD4-202ENST00000430771 CRYGAP11844 174 aa6.57□□□□□ -1.36
CHD4-202ENST00000430771 OCIAD2Q56VL3 154 aa6.57□□□□□ -1.36
CHD4-202ENST00000430771 LINC01600Q96MT4 127 aa6.57□□□□□ -1.36
CHD4-202ENST00000430771 NAA38Q9BRA0 125 aaKnown RBP6.57□□□□□ -1.36
CHD4-202ENST00000430771 TEX49A0A1B0GTD5 131 aa6.56□□□□□ -1.36
CHD4-202ENST00000430771 LST1O00453 97 aa6.56□□□□□ -1.36
CHD4-202ENST00000430771 SPRR1BP22528 89 aa6.56□□□□□ -1.36
CHD4-202ENST00000430771 PPDPFLQ8WWR9 84 aa6.56□□□□□ -1.36
CHD4-202ENST00000430771 PCLOQ9Y6V0 5065 aa6.55□□□□□ -1.36
CHD4-202ENST00000430771 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
CHD4-202ENST00000430771 TRACP01848 142 aa6.55□□□□□ -1.36
CHD4-202ENST00000430771 ATXN8Q156A1 80 aa6.55□□□□□ -1.36
CHD4-202ENST00000430771 DEFB105AQ8NG35 78 aa6.55□□□□□ -1.36
CHD4-202ENST00000430771 LAMTOR3Q9UHA4 124 aa6.55□□□□□ -1.36
CHD4-202ENST00000430771 MYCBP2O75592 4640 aa6.54□□□□□ -1.36
CHD4-202ENST00000430771 FABP2P12104 132 aa6.54□□□□□ -1.36
CHD4-202ENST00000430771 PRR26Q8N8Z3 221 aa6.54□□□□□ -1.36
CHD4-202ENST00000430771 KRTAP3-3Q9BYR6 98 aa6.54□□□□□ -1.36
CHD4-202ENST00000430771 KRTAP3-2Q9BYR7 98 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms