RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
CTNND1-208ENST00000428599 OBSCN-AS1Q96MR7 158 aa5.98□□□□□ -1.45
CTNND1-208ENST00000428599 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
CTNND1-208ENST00000428599 ZNF861PO60384 105 aa5.97□□□□□ -1.45
CTNND1-208ENST00000428599 IGLV6-57P01721 117 aa5.96□□□□□ -1.45
CTNND1-208ENST00000428599 COA5Q86WW8 74 aa5.96□□□□□ -1.46
CTNND1-208ENST00000428599 TM2D3Q9BRN9 247 aa5.96□□□□□ -1.46
CTNND1-208ENST00000428599 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
CTNND1-208ENST00000428599 K7EQZ3 153 aa5.95□□□□□ -1.46
CTNND1-208ENST00000428599 C8orf17Q9NRJ1 99 aa5.95□□□□□ -1.46
CTNND1-208ENST00000428599 KRTAP10-11P60412 298 aa5.95□□□□□ -1.46
CTNND1-208ENST00000428599 KRTAP10-3P60369 221 aa5.94□□□□□ -1.46
CTNND1-208ENST00000428599 K7EIL1 84 aa5.94□□□□□ -1.46
CTNND1-208ENST00000428599 KRTAP1-3Q8IUG1 177 aa5.94□□□□□ -1.46
CTNND1-208ENST00000428599 RANBP2P49792 3224 aaKnown RBP5.94□□□□□ -1.46
CTNND1-208ENST00000428599 CHD9Q3L8U1 2897 aa5.94□□□□□ -1.46
CTNND1-208ENST00000428599 KCNQ1DNQ9H478 68 aa5.93□□□□□ -1.46
CTNND1-208ENST00000428599 A0A1B0GVX0 72 aa5.93□□□□□ -1.46
CTNND1-208ENST00000428599 A0A087WTM6 91 aa5.93□□□□□ -1.46
CTNND1-208ENST00000428599 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
CTNND1-208ENST00000428599 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
CTNND1-208ENST00000428599 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
CTNND1-208ENST00000428599 C9orf129Q5T035 196 aaKnown RBP5.92□□□□□ -1.46
CTNND1-208ENST00000428599 IGFL1Q6UW32 110 aa5.92□□□□□ -1.46
CTNND1-208ENST00000428599 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
CTNND1-208ENST00000428599 ERC2-IT1O76042 136 aa5.91□□□□□ -1.46
CTNND1-208ENST00000428599 CSNK1G2-AS1Q8NCQ2 148 aa5.91□□□□□ -1.46
CTNND1-208ENST00000428599 PRR15Q8IV56 129 aa5.9□□□□□ -1.46
CTNND1-208ENST00000428599 MKI67P46013 3256 aaKnown RBP5.9□□□□□ -1.46
CTNND1-208ENST00000428599 IGLV7-43P04211 117 aa5.89□□□□□ -1.47
CTNND1-208ENST00000428599 KRTAP1-1Q07627 177 aa5.89□□□□□ -1.47
CTNND1-208ENST00000428599 SMCPP49901 116 aaPredicted RBP5.89□□□□□ -1.47
CTNND1-208ENST00000428599 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
CTNND1-208ENST00000428599 LAMA3Q16787 3333 aa5.88□□□□□ -1.47
CTNND1-208ENST00000428599 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
CTNND1-208ENST00000428599 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
CTNND1-208ENST00000428599 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
CTNND1-208ENST00000428599 A8MUN3 132 aa5.86□□□□□ -1.47
CTNND1-208ENST00000428599 Q6ZSA8 131 aa5.86□□□□□ -1.47
CTNND1-208ENST00000428599 C15orf56Q8N910 161 aa5.86□□□□□ -1.47
CTNND1-208ENST00000428599 A0A0D9SG42 100 aa5.85□□□□□ -1.47
CTNND1-208ENST00000428599 CD164Q04900 197 aa5.85□□□□□ -1.47
CTNND1-208ENST00000428599 M0R2T5 61 aa5.85□□□□□ -1.47
CTNND1-208ENST00000428599 PLA2G2DQ9UNK4 145 aa5.85□□□□□ -1.47
CTNND1-208ENST00000428599 GIG44P09565 113 aaPredicted RBP5.84□□□□□ -1.47
CTNND1-208ENST00000428599 TLX1NBP0CAT3 122 aa5.84□□□□□ -1.47
CTNND1-208ENST00000428599 PRO0461Q9UI25 63 aa5.84□□□□□ -1.47
CTNND1-208ENST00000428599 HELZ2Q9BYK8 2649 aaKnown RBP5.84□□□□□ -1.47
CTNND1-208ENST00000428599 IGLV5-48A0A075B6I7 105 aa5.84□□□□□ -1.48
CTNND1-208ENST00000428599 PRR34Q9NV39 138 aa5.84□□□□□ -1.48
CTNND1-208ENST00000428599 PSORS1C2Q9UIG4 136 aa5.83□□□□□ -1.48
CTNND1-208ENST00000428599 FLNAP21333 2647 aaKnown RBP5.83□□□□□ -1.48
CTNND1-208ENST00000428599 LITAFQ99732 161 aa5.83□□□□□ -1.48
CTNND1-208ENST00000428599 ANAPC11Q9NYG5 84 aa5.83□□□□□ -1.48
CTNND1-208ENST00000428599 LUZP6Q538Z0 58 aa5.82□□□□□ -1.48
CTNND1-208ENST00000428599 FAM104AQ969W3 186 aa5.82□□□□□ -1.48
CTNND1-208ENST00000428599 TRANK1O15050 2925 aa5.82□□□□□ -1.48
CTNND1-208ENST00000428599 BRCA2P51587 3418 aa5.82□□□□□ -1.48
CTNND1-208ENST00000428599 SPRR4Q96PI1 79 aa5.82□□□□□ -1.48
CTNND1-208ENST00000428599 LCA10Q71F78 164 aa5.81□□□□□ -1.48
CTNND1-208ENST00000428599 ZNF575Q86XF7 245 aa5.81□□□□□ -1.48
CTNND1-208ENST00000428599 LINC00483Q53H64 154 aa5.81□□□□□ -1.48
CTNND1-208ENST00000428599 Q8N377 158 aa5.81□□□□□ -1.48
CTNND1-208ENST00000428599 ITPR3Q14573 2671 aa5.8□□□□□ -1.48
CTNND1-208ENST00000428599 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
CTNND1-208ENST00000428599 MGAM2Q2M2H8 2515 aa5.8□□□□□ -1.48
CTNND1-208ENST00000428599 USP24Q9UPU5 2620 aa5.8□□□□□ -1.48
CTNND1-208ENST00000428599 Q8N1X5 172 aa5.79□□□□□ -1.48
CTNND1-208ENST00000428599 KTN1-AS1Q86SY8 53 aa5.79□□□□□ -1.48
CTNND1-208ENST00000428599 CNBPP62633 177 aaKnown RBP5.79□□□□□ -1.48
CTNND1-208ENST00000428599 CFAP46Q8IYW2 2715 aa5.79□□□□□ -1.48
CTNND1-208ENST00000428599 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
CTNND1-208ENST00000428599 BPTFQ12830 3046 aa5.78□□□□□ -1.48
CTNND1-208ENST00000428599 A0A1W2PNN7 141 aa5.78□□□□□ -1.48
CTNND1-208ENST00000428599 LINC00612Q8N6U2 182 aa5.78□□□□□ -1.48
CTNND1-208ENST00000428599 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
CTNND1-208ENST00000428599 PRUNE2Q8WUY3 3088 aa5.76□□□□□ -1.49
CTNND1-208ENST00000428599 ZNF292O60281 2723 aa5.73□□□□□ -1.49
CTNND1-208ENST00000428599 KLKP1Q107X0 134 aa5.73□□□□□ -1.49
CTNND1-208ENST00000428599 PRR26Q8N8Z3 221 aa5.72□□□□□ -1.49
CTNND1-208ENST00000428599 MGAQ8IWI9 3026 aa5.72□□□□□ -1.49
CTNND1-208ENST00000428599 CENPEQ02224 2701 aa5.72□□□□□ -1.49
CTNND1-208ENST00000428599 HRES1P13985 223 aa5.72□□□□□ -1.49
CTNND1-208ENST00000428599 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.49
CTNND1-208ENST00000428599 CR1P17927 2039 aa5.71□□□□□ -1.5
CTNND1-208ENST00000428599 ATRQ13535 2644 aa5.71□□□□□ -1.5
CTNND1-208ENST00000428599 CASC10Q5T4H9 136 aa5.71□□□□□ -1.5
CTNND1-208ENST00000428599 MAST4O15021 2626 aa5.7□□□□□ -1.5
CTNND1-208ENST00000428599 TNP2Q05952 138 aa5.69□□□□□ -1.5
CTNND1-208ENST00000428599 Q1T7F1 81 aa5.69□□□□□ -1.5
CTNND1-208ENST00000428599 A0A1W2PNM2 257 aa5.67□□□□□ -1.5
CTNND1-208ENST00000428599 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
CTNND1-208ENST00000428599 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
CTNND1-208ENST00000428599 UNC80Q8N2C7 3258 aa5.65□□□□□ -1.5
CTNND1-208ENST00000428599 A0A1B0GU33 70 aa5.65□□□□□ -1.5
CTNND1-208ENST00000428599 FAM229BQ4G0N7 80 aa5.65□□□□□ -1.5
CTNND1-208ENST00000428599 LAMA2P24043 3122 aaKnown RBP5.65□□□□□ -1.5
CTNND1-208ENST00000428599 WDFY4Q6ZS81 3184 aa5.65□□□□□ -1.51
CTNND1-208ENST00000428599 S4R3F8 94 aa5.65□□□□□ -1.51
CTNND1-208ENST00000428599 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms