RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 SERP2Q8N6R1 65 aa13.05□□□□□ -0.32
PMPCB-202ENST00000428154 SS18L2Q9UHA2 77 aa13.05□□□□□ -0.32
PMPCB-202ENST00000428154 FLNBO75369 2602 aaKnown RBP13.05□□□□□ -0.32
PMPCB-202ENST00000428154 Q6ZVQ6 151 aa13.05□□□□□ -0.32
PMPCB-202ENST00000428154 CRYGAP11844 174 aa13.04□□□□□ -0.32
PMPCB-202ENST00000428154 SPRR1AP35321 89 aa13.04□□□□□ -0.32
PMPCB-202ENST00000428154 IGLV1-50A0A075B6I6 118 aa13.03□□□□□ -0.32
PMPCB-202ENST00000428154 A0A087WVE0 104 aa13.02□□□□□ -0.32
PMPCB-202ENST00000428154 BAHCC1Q9P281 2608 aa13.02□□□□□ -0.33
PMPCB-202ENST00000428154 LINC01547P58512 204 aaPredicted RBP13.02□□□□□ -0.33
PMPCB-202ENST00000428154 A0A1B0GW54 56 aa13.01□□□□□ -0.33
PMPCB-202ENST00000428154 Q6ZRX8 168 aa13.01□□□□□ -0.33
PMPCB-202ENST00000428154 KRTAP4-16G5E9R7 235 aaPredicted RBP13□□□□□ -0.33
PMPCB-202ENST00000428154 CASC10Q5T4H9 136 aa12.99□□□□□ -0.33
PMPCB-202ENST00000428154 ETDCA0A1B0GVM5 59 aa12.99□□□□□ -0.33
PMPCB-202ENST00000428154 M0R2N4 97 aa12.98□□□□□ -0.33
PMPCB-202ENST00000428154 HAMPP81172 84 aa12.97□□□□□ -0.33
PMPCB-202ENST00000428154 FAM19A1Q7Z5A9 133 aa12.97□□□□□ -0.33
PMPCB-202ENST00000428154 MRPL55Q7Z7F7 128 aaKnown RBP12.97□□□□□ -0.33
PMPCB-202ENST00000428154 IGLV5-48A0A075B6I7 105 aa12.96□□□□□ -0.34
PMPCB-202ENST00000428154 SMIM20Q8N5G0 67 aa12.96□□□□□ -0.34
PMPCB-202ENST00000428154 CNBPP62633 177 aaKnown RBP12.95□□□□□ -0.34
PMPCB-202ENST00000428154 C14orf177Q52M58 125 aa12.95□□□□□ -0.34
PMPCB-202ENST00000428154 Q8N377 158 aa12.94□□□□□ -0.34
PMPCB-202ENST00000428154 HUWE1Q7Z6Z7 4374 aaKnown RBP12.93□□□□□ -0.34
PMPCB-202ENST00000428154 NOTCH1P46531 2555 aa12.92□□□□□ -0.34
PMPCB-202ENST00000428154 FAM168BA1KXE4 195 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 RPL37AP8A6NKH3 93 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 PKIGQ9Y2B9 76 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 COL6A5A8TX70 2615 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 KRTAP7-1Q8IUC3 87 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 B9D2Q9BPU9 175 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 APLNQ9ULZ1 77 aa12.91□□□□□ -0.34
PMPCB-202ENST00000428154 C16orf90A8MZG2 172 aa12.9□□□□□ -0.34
PMPCB-202ENST00000428154 Q9BRP9 147 aa12.9□□□□□ -0.34
PMPCB-202ENST00000428154 DNAH1Q9P2D7 4330 aa12.89□□□□□ -0.35
PMPCB-202ENST00000428154 PSCAO43653 123 aa12.88□□□□□ -0.35
PMPCB-202ENST00000428154 REG3GQ6UW15 175 aa12.88□□□□□ -0.35
PMPCB-202ENST00000428154 FAM19A5Q7Z5A7 132 aaPredicted RBP12.88□□□□□ -0.35
PMPCB-202ENST00000428154 DEFB105AQ8NG35 78 aa12.87□□□□□ -0.35
PMPCB-202ENST00000428154 TRAV7A0A075B6U4 112 aa12.85□□□□□ -0.35
PMPCB-202ENST00000428154 FUSP35637 526 aaKnown RBP eCLIP12.85□□□□□ -0.35
PMPCB-202ENST00000428154 NREPQ16612 68 aa12.85□□□□□ -0.35
PMPCB-202ENST00000428154 TNP2Q05952 138 aa12.85□□□□□ -0.35
PMPCB-202ENST00000428154 NBEAL1Q6ZS30 2694 aa12.83□□□□□ -0.35
PMPCB-202ENST00000428154 KRTAP1-5Q9BYS1 174 aa12.83□□□□□ -0.36
PMPCB-202ENST00000428154 TMEM258P61165 79 aa12.82□□□□□ -0.36
PMPCB-202ENST00000428154 UBE2BP63146 152 aa12.82□□□□□ -0.36
PMPCB-202ENST00000428154 A0A096LNI7 61 aa12.79□□□□□ -0.36
PMPCB-202ENST00000428154 NUPR2A6NF83 97 aa12.79□□□□□ -0.36
PMPCB-202ENST00000428154 C1orf137Q5JT78 98 aa12.79□□□□□ -0.36
PMPCB-202ENST00000428154 Q8NBF4 154 aa12.77□□□□□ -0.36
PMPCB-202ENST00000428154 SPRR4Q96PI1 79 aa12.76□□□□□ -0.37
PMPCB-202ENST00000428154 BPY2O14599 106 aa12.76□□□□□ -0.37
PMPCB-202ENST00000428154 ST20-AS1Q8NBB2 130 aa12.75□□□□□ -0.37
PMPCB-202ENST00000428154 F8WEM9 126 aa12.74□□□□□ -0.37
PMPCB-202ENST00000428154 ERC2-IT1O76042 136 aa12.74□□□□□ -0.37
PMPCB-202ENST00000428154 RPS28P62857 69 aaKnown RBP12.74□□□□□ -0.37
PMPCB-202ENST00000428154 A0A1W2PNM2 257 aa12.73□□□□□ -0.37
PMPCB-202ENST00000428154 H0Y9J4 135 aa12.73□□□□□ -0.37
PMPCB-202ENST00000428154 LINC00474Q9P2X8 69 aa12.73□□□□□ -0.37
PMPCB-202ENST00000428154 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
PMPCB-202ENST00000428154 A0A1W2PNN7 141 aa12.72□□□□□ -0.37
PMPCB-202ENST00000428154 C3orf84H3BNL1 204 aa12.72□□□□□ -0.37
PMPCB-202ENST00000428154 SCXQ7RTU7 201 aa12.72□□□□□ -0.37
PMPCB-202ENST00000428154 C9orf163Q8N9P6 203 aa12.72□□□□□ -0.37
PMPCB-202ENST00000428154 NBDYA0A0U1RRE5 68 aa12.71□□□□□ -0.37
PMPCB-202ENST00000428154 MGAM2Q2M2H8 2515 aa12.71□□□□□ -0.38
PMPCB-202ENST00000428154 IGKV4-1P06312 121 aa12.7□□□□□ -0.38
PMPCB-202ENST00000428154 MDFIQ99750 246 aa12.7□□□□□ -0.38
PMPCB-202ENST00000428154 SMIM29Q86T20 159 aa12.69□□□□□ -0.38
PMPCB-202ENST00000428154 DYNC2H1Q8NCM8 4307 aaKnown RBP12.68□□□□□ -0.38
PMPCB-202ENST00000428154 IGLV8-61A0A075B6I0 122 aa12.68□□□□□ -0.38
PMPCB-202ENST00000428154 KLKP1Q107X0 134 aa12.68□□□□□ -0.38
PMPCB-202ENST00000428154 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
PMPCB-202ENST00000428154 J3KT08 172 aa12.68□□□□□ -0.38
PMPCB-202ENST00000428154 C20orf197Q8N268 126 aa12.68□□□□□ -0.38
PMPCB-202ENST00000428154 CYSTM1Q9H1C7 97 aa12.68□□□□□ -0.38
PMPCB-202ENST00000428154 DNAH9Q9NYC9 4486 aa12.67□□□□□ -0.38
PMPCB-202ENST00000428154 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
PMPCB-202ENST00000428154 LINC00476Q8WZB0 136 aa12.64□□□□□ -0.39
PMPCB-202ENST00000428154 NDUFC1O43677 76 aa12.62□□□□□ -0.39
PMPCB-202ENST00000428154 SPRR1BP22528 89 aa12.62□□□□□ -0.39
PMPCB-202ENST00000428154 Q6ZRN7 208 aaPredicted RBP12.62□□□□□ -0.39
PMPCB-202ENST00000428154 STAB2Q8WWQ8 2551 aa12.62□□□□□ -0.39
PMPCB-202ENST00000428154 PRLHP81277 87 aa12.61□□□□□ -0.39
PMPCB-202ENST00000428154 DPH3Q96FX2 82 aa12.59□□□□□ -0.39
PMPCB-202ENST00000428154 HIGD2AQ9BW72 106 aa12.59□□□□□ -0.39
PMPCB-202ENST00000428154 PHF5AQ7RTV0 110 aaKnown RBP12.59□□□□□ -0.39
PMPCB-202ENST00000428154 IGFL1Q6UW32 110 aa12.57□□□□□ -0.4
PMPCB-202ENST00000428154 Q8N9L7 120 aa12.57□□□□□ -0.4
PMPCB-202ENST00000428154 UBE2AP49459 152 aa12.57□□□□□ -0.4
PMPCB-202ENST00000428154 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
PMPCB-202ENST00000428154 EPM2AB3EWF7 344 aa12.55□□□□□ -0.4
PMPCB-202ENST00000428154 H7BZZ5 65 aa12.55□□□□□ -0.4
PMPCB-202ENST00000428154 OCR1Q9BZK8 76 aa12.55□□□□□ -0.4
PMPCB-202ENST00000428154 COL7A1Q02388 2944 aa12.53□□□□□ -0.4
PMPCB-202ENST00000428154 FAM236DA0A1B0GTK5 79 aa12.52□□□□□ -0.41
PMPCB-202ENST00000428154 FAM236CP0DP71 79 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms