RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 K7ERJ3 54 aa2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 LINC01556Q5JQF7 62 aa2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 C3orf56Q8N813 242 aa2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 PIEZO1Q92508 2521 aa2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 ATOX1O00244 68 aa2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 ANGP03950 147 aaKnown RBP2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 PRR15Q8IV56 129 aa2.18□□□□□ -2.06
NUDCD1-202ENST00000427660 CFAP54Q96N23 3096 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 ROS1P08922 2347 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 ANKRD17O75179 2603 aaKnown RBP2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 DEFB1P60022 68 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 SPAG11BQ08648 103 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 Q6JHZ5 121 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 C9orf163Q8N9P6 203 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 DIRC1Q969H9 104 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 UBL5Q9BZL1 73 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 VPS13AQ96RL7 3174 aa2.17□□□□□ -2.06
NUDCD1-202ENST00000427660 LOC110117498A0A087WWA1 95 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 DEFB130BP0DP73 79 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 DEFB130AP0DP74 79 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 WFDC2Q14508 124 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 TOMM7Q9P0U1 55 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 LINC00474Q9P2X8 69 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 KMT2BQ9UMN6 2715 aaPredicted RBP2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 COL6A3P12111 3177 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 SPTBN2O15020 2390 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 IGF2RP11717 2491 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 WDFY3Q8IZQ1 3526 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 CEP295Q9C0D2 2601 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 DMXL1Q9Y485 3027 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 SPTBN1Q01082 2364 aaKnown RBP2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 BAALC-AS2P0C853 105 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 ATP5EP56381 51 aaPredicted RBP2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 OBSCN-AS1Q96MR7 158 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 USP34Q70CQ2 3546 aa2.16□□□□□ -2.06
NUDCD1-202ENST00000427660 FREM2Q5SZK8 3169 aa2.15□□□□□ -2.06
NUDCD1-202ENST00000427660 AKAP6Q13023 2319 aa2.15□□□□□ -2.06
NUDCD1-202ENST00000427660 HRNRQ86YZ3 2850 aaPredicted RBP2.15□□□□□ -2.06
NUDCD1-202ENST00000427660 CREBBPQ92793 2442 aa2.15□□□□□ -2.06
NUDCD1-202ENST00000427660 MED13LQ71F56 2210 aa2.15□□□□□ -2.07
NUDCD1-202ENST00000427660 hADV29S1A0JD25 119 aa2.15□□□□□ -2.07
NUDCD1-202ENST00000427660 NDUFC1O43677 76 aa2.15□□□□□ -2.07
NUDCD1-202ENST00000427660 DEFB135Q30KP9 77 aa2.15□□□□□ -2.07
NUDCD1-202ENST00000427660 SPACA4Q8TDM5 124 aa2.15□□□□□ -2.07
NUDCD1-202ENST00000427660 DSCR8Q96T75 97 aa2.15□□□□□ -2.07
NUDCD1-202ENST00000427660 BSNQ9UPA5 3926 aa2.15□□□□□ -2.07
NUDCD1-202ENST00000427660 A0A096LPF7 62 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 NUPR2A6NF83 97 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 RPS28P62857 69 aaKnown RBP2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 SOSTDC1Q6X4U4 206 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 PHF5AQ7RTV0 110 aaKnown RBP2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 Q8N814 137 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 DOPEY2Q9Y3R5 2298 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 ABCA1O95477 2261 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 TRAV23DV6A0A075B6W5 121 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 UQCRQO14949 82 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 CCKP06307 115 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 COX6A2Q02221 97 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 ESRGQ1W209 222 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 LYPD5Q6UWN5 251 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 LINC00269Q8N2A0 174 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
NUDCD1-202ENST00000427660 DEFB131BA0A096LNP1 70 aa2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 LOC107984640A0A0U1RRK4 108 aa2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 COX7BP24311 80 aa2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 ELOF1P60002 83 aaKnown RBP2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 RBM3P98179 157 aaKnown RBP2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 LINC00575Q6W349 94 aa2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 C5orf38Q86SI9 138 aa2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 CLEC2BQ92478 149 aa2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 NAA38Q9BRA0 125 aaKnown RBP2.13□□□□□ -2.07
NUDCD1-202ENST00000427660 MGAQ8IWI9 3026 aa2.12□□□□□ -2.07
NUDCD1-202ENST00000427660 ZZEF1O43149 2961 aa2.12□□□□□ -2.07
NUDCD1-202ENST00000427660 ERC2-IT1O76042 136 aa2.12□□□□□ -2.07
NUDCD1-202ENST00000427660 WDFY4Q6ZS81 3184 aa2.12□□□□□ -2.07
NUDCD1-202ENST00000427660 ITPR1Q14643 2758 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 TEX49A0A1B0GTD5 131 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 F8WEM9 126 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 CNBPP62633 177 aaKnown RBP2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 Q1T7F1 81 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 KCNQ1DNQ9H478 68 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 C14orf132Q9NPU4 83 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 ATMQ13315 3056 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 PRRC2CQ9Y520 2896 aaKnown RBP2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 ACACBO00763 2458 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 NAV2Q8IVL1 2488 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 PRB4P10163 310 aaPredicted RBP2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 WFDC10AQ9H1F0 79 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 ADGRG4Q8IZF6 3080 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 FAM208BQ5VWN6 2430 aa2.11□□□□□ -2.07
NUDCD1-202ENST00000427660 DSPP15924 2871 aaKnown RBP2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 IGKV3OR2-268A0A0C4DH90 116 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 ETDCA0A1B0GVM5 59 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 COX7CP15954 63 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 ENHOQ6UWT2 76 aa2.1□□□□□ -2.07
NUDCD1-202ENST00000427660 LINC00526Q96FQ7 95 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms