RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 TRBV7-6A0A0J9YX20 115 aa9.45□□□□□ -0.9
LIG1-202ENST00000427526 C15orf56Q8N910 161 aa9.45□□□□□ -0.9
LIG1-202ENST00000427526 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.45□□□□□ -0.9
LIG1-202ENST00000427526 Q6ZRU5 148 aa9.45□□□□□ -0.9
LIG1-202ENST00000427526 COX7BP24311 80 aa9.44□□□□□ -0.9
LIG1-202ENST00000427526 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
LIG1-202ENST00000427526 PDE6GP18545 87 aa9.44□□□□□ -0.9
LIG1-202ENST00000427526 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
LIG1-202ENST00000427526 ESRGQ1W209 222 aa9.43□□□□□ -0.9
LIG1-202ENST00000427526 BRK1Q8WUW1 75 aa9.43□□□□□ -0.9
LIG1-202ENST00000427526 M0R378 163 aa9.42□□□□□ -0.9
LIG1-202ENST00000427526 DEFB131BA0A096LNP1 70 aa9.42□□□□□ -0.9
LIG1-202ENST00000427526 TRBV7-4A0A0J9YYF1 115 aa9.42□□□□□ -0.9
LIG1-202ENST00000427526 K7EIL1 84 aa9.42□□□□□ -0.9
LIG1-202ENST00000427526 Q6ZVQ6 151 aa9.42□□□□□ -0.9
LIG1-202ENST00000427526 LINC01547P58512 204 aaPredicted RBP9.41□□□□□ -0.9
LIG1-202ENST00000427526 MGAM2Q2M2H8 2515 aa9.41□□□□□ -0.9
LIG1-202ENST00000427526 GHRHP01286 108 aa9.41□□□□□ -0.9
LIG1-202ENST00000427526 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
LIG1-202ENST00000427526 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
LIG1-202ENST00000427526 Q6ZRP5 223 aa9.39□□□□□ -0.91
LIG1-202ENST00000427526 LINC01556Q5JQF7 62 aa9.38□□□□□ -0.91
LIG1-202ENST00000427526 MDFIQ99750 246 aa9.38□□□□□ -0.91
LIG1-202ENST00000427526 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
LIG1-202ENST00000427526 HAMPP81172 84 aa9.37□□□□□ -0.91
LIG1-202ENST00000427526 CXCL6P80162 114 aa9.37□□□□□ -0.91
LIG1-202ENST00000427526 TM2D3Q9BRN9 247 aa9.36□□□□□ -0.91
LIG1-202ENST00000427526 H7BZZ5 65 aa9.35□□□□□ -0.91
LIG1-202ENST00000427526 BCE1O60756 84 aa9.35□□□□□ -0.91
LIG1-202ENST00000427526 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
LIG1-202ENST00000427526 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
LIG1-202ENST00000427526 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
LIG1-202ENST00000427526 KCNQ1DNQ9H478 68 aa9.31□□□□□ -0.92
LIG1-202ENST00000427526 TRAV10A0A0B4J240 114 aa9.3□□□□□ -0.92
LIG1-202ENST00000427526 DNAH10OSP0CZ25 163 aa9.3□□□□□ -0.92
LIG1-202ENST00000427526 TRAV7A0A075B6U4 112 aa9.3□□□□□ -0.92
LIG1-202ENST00000427526 SERTAD4-AS1Q5TG53 156 aa9.29□□□□□ -0.92
LIG1-202ENST00000427526 HUWE1Q7Z6Z7 4374 aaKnown RBP9.28□□□□□ -0.92
LIG1-202ENST00000427526 C7orf33Q8WU49 177 aa9.28□□□□□ -0.92
LIG1-202ENST00000427526 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
LIG1-202ENST00000427526 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
LIG1-202ENST00000427526 SCXQ7RTU7 201 aa9.26□□□□□ -0.93
LIG1-202ENST00000427526 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
LIG1-202ENST00000427526 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
LIG1-202ENST00000427526 DNAH1Q9P2D7 4330 aa9.26□□□□□ -0.93
LIG1-202ENST00000427526 PMAIP1Q13794 54 aa9.26□□□□□ -0.93
LIG1-202ENST00000427526 Q8N377 158 aa9.25□□□□□ -0.93
LIG1-202ENST00000427526 KRTAP4-16G5E9R7 235 aaPredicted RBP9.23□□□□□ -0.93
LIG1-202ENST00000427526 KLKP1Q107X0 134 aa9.23□□□□□ -0.93
LIG1-202ENST00000427526 COL7A1Q02388 2944 aa9.22□□□□□ -0.93
LIG1-202ENST00000427526 IGLV5-48A0A075B6I7 105 aa9.22□□□□□ -0.93
LIG1-202ENST00000427526 IGLV5-37A0A075B6J1 123 aa9.21□□□□□ -0.93
LIG1-202ENST00000427526 F8WEM9 126 aa9.21□□□□□ -0.93
LIG1-202ENST00000427526 CASC10Q5T4H9 136 aa9.21□□□□□ -0.93
LIG1-202ENST00000427526 STAB2Q8WWQ8 2551 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 Q6ZRX8 168 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 DEFB105AQ8NG35 78 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 RMI2Q96E14 147 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 SNURFQ9Y675 71 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 IGLV1-50A0A075B6I6 118 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 SPRR1AP35321 89 aa9.21□□□□□ -0.94
LIG1-202ENST00000427526 Q9BRP9 147 aa9.2□□□□□ -0.94
LIG1-202ENST00000427526 DHRS4-AS1Q9P1J3 65 aa9.2□□□□□ -0.94
LIG1-202ENST00000427526 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
LIG1-202ENST00000427526 NREPQ16612 68 aa9.19□□□□□ -0.94
LIG1-202ENST00000427526 MPLKIPQ8TAP9 179 aa9.19□□□□□ -0.94
LIG1-202ENST00000427526 PRYO14603 147 aa9.18□□□□□ -0.94
LIG1-202ENST00000427526 IGKV4-1P06312 121 aa9.18□□□□□ -0.94
LIG1-202ENST00000427526 FAM229BQ4G0N7 80 aa9.18□□□□□ -0.94
LIG1-202ENST00000427526 Q8N9L7 120 aa9.18□□□□□ -0.94
LIG1-202ENST00000427526 C3orf84H3BNL1 204 aa9.17□□□□□ -0.94
LIG1-202ENST00000427526 BPY2O14599 106 aa9.16□□□□□ -0.94
LIG1-202ENST00000427526 TNP2Q05952 138 aa9.16□□□□□ -0.94
LIG1-202ENST00000427526 PRR15Q8IV56 129 aa9.15□□□□□ -0.94
LIG1-202ENST00000427526 CD164Q04900 197 aa9.15□□□□□ -0.95
LIG1-202ENST00000427526 ETDCA0A1B0GVM5 59 aa9.14□□□□□ -0.95
LIG1-202ENST00000427526 A0A1B0GW54 56 aa9.14□□□□□ -0.95
LIG1-202ENST00000427526 A0A1W2PNM2 257 aa9.14□□□□□ -0.95
LIG1-202ENST00000427526 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
LIG1-202ENST00000427526 B9D2Q9BPU9 175 aa9.14□□□□□ -0.95
LIG1-202ENST00000427526 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
LIG1-202ENST00000427526 MRPL55Q7Z7F7 128 aaKnown RBP9.13□□□□□ -0.95
LIG1-202ENST00000427526 ATP5EP56381 51 aaPredicted RBP9.12□□□□□ -0.95
LIG1-202ENST00000427526 ERC2-IT1O76042 136 aa9.11□□□□□ -0.95
LIG1-202ENST00000427526 FUSP35637 526 aaKnown RBP eCLIP9.11□□□□□ -0.95
LIG1-202ENST00000427526 C1orf137Q5JT78 98 aa9.1□□□□□ -0.95
LIG1-202ENST00000427526 OCR1Q9BZK8 76 aa9.1□□□□□ -0.95
LIG1-202ENST00000427526 NDUFC1O43677 76 aa9.09□□□□□ -0.95
LIG1-202ENST00000427526 SPRR4Q96PI1 79 aa9.09□□□□□ -0.95
LIG1-202ENST00000427526 KRTAP1-5Q9BYS1 174 aa9.09□□□□□ -0.95
LIG1-202ENST00000427526 Q8NBF4 154 aa9.08□□□□□ -0.96
LIG1-202ENST00000427526 TMEM254Q8TBM7 123 aa9.08□□□□□ -0.96
LIG1-202ENST00000427526 LYSTQ99698 3801 aa9.08□□□□□ -0.96
LIG1-202ENST00000427526 APLNQ9ULZ1 77 aa9.08□□□□□ -0.96
LIG1-202ENST00000427526 REG3GQ6UW15 175 aa9.06□□□□□ -0.96
LIG1-202ENST00000427526 UBE2BP63146 152 aa9.05□□□□□ -0.96
LIG1-202ENST00000427526 SMIM29Q86T20 159 aa9.05□□□□□ -0.96
LIG1-202ENST00000427526 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms