RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 HIST1H2BMQ99879 126 aa1.89□□□□□ -2.11
LINC00400-201ENST00000425609 RNASE7Q9H1E1 156 aaKnown RBP1.89□□□□□ -2.11
LINC00400-201ENST00000425609 MANBALQ9NQG1 85 aa1.89□□□□□ -2.11
LINC00400-201ENST00000425609 NIT2Q9NQR4 276 aa1.89□□□□□ -2.11
LINC00400-201ENST00000425609 HMSDA8MTL9 139 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 CCL25O15444 150 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 PDE6DO43924 150 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 PPP1R17O96001 155 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 MGPP08493 103 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 CIRBPQ14011 172 aaKnown RBP1.88□□□□□ -2.11
LINC00400-201ENST00000425609 ZNF345Q14585 488 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 C9orf62Q8N4C0 152 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 FAM213BQ8TBF2 198 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 TOMM6Q96B49 74 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 BTF3L4Q96K17 158 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 HERC1Q15751 4861 aa1.88□□□□□ -2.11
LINC00400-201ENST00000425609 TRAV1-1A0A0B4J248 108 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 IGHV1-58A0A0C4DH39 117 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 TRBV10-2A0A0K0K1G8 114 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 M0QY20 66 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 ARPC5O15511 151 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 ZNF25P17030 456 aaPredicted RBP1.87□□□□□ -2.11
LINC00400-201ENST00000425609 RPL35P42766 123 aaKnown RBP1.87□□□□□ -2.11
LINC00400-201ENST00000425609 GNG4P50150 75 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 KRTAP10-4P60372 401 aaPredicted RBP1.87□□□□□ -2.11
LINC00400-201ENST00000425609 SPINK6Q6UWN8 80 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 OR10AG1Q8NH19 301 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 TSKUQ8WUA8 353 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 MED9Q9NWA0 146 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 PLAC8Q9NZF1 115 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 FAT1Q14517 4588 aa1.87□□□□□ -2.11
LINC00400-201ENST00000425609 C1orf196B1AJZ1 125 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 I3L3M4 83 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 IGLC6P0CF74 106 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 Q5BKY6 102 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 OR5A1Q8NGJ0 315 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 LINC01600Q96MT4 127 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 GNG13Q9P2W3 67 aa1.86□□□□□ -2.11
LINC00400-201ENST00000425609 TRAV9-1A0A075B6T8 112 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 GVQW2A0A096LPI5 108 aaPredicted RBP1.85□□□□□ -2.11
LINC00400-201ENST00000425609 TRBV6-5A0A0K0K1A5 114 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 LOC107984640A0A0U1RRK4 108 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 FXYD2P54710 66 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 FOXA3P55318 350 aaPredicted RBP1.85□□□□□ -2.11
LINC00400-201ENST00000425609 COX6A2Q02221 97 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 SIGMAR1Q99720 223 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 CNFNQ9BYD5 112 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 ST20Q9HBF5 79 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 MYCBP2O75592 4640 aa1.85□□□□□ -2.11
LINC00400-201ENST00000425609 PKHD1L1Q86WI1 4243 aa1.84□□□□□ -2.11
LINC00400-201ENST00000425609 DMBT1Q9UGM3 2413 aaPredicted RBP1.84□□□□□ -2.11
LINC00400-201ENST00000425609 IGKV3OR2-268A0A0C4DH90 116 aa1.84□□□□□ -2.11
LINC00400-201ENST00000425609 LINC00959A0A1B0GUT2 108 aa1.84□□□□□ -2.11
LINC00400-201ENST00000425609 BCL2P10415 239 aa1.84□□□□□ -2.11
LINC00400-201ENST00000425609 FCER1GP30273 86 aa1.84□□□□□ -2.11
LINC00400-201ENST00000425609 ZNF625Q96I27 306 aaPredicted RBP1.84□□□□□ -2.11
LINC00400-201ENST00000425609 CARD19Q96LW7 228 aa1.84□□□□□ -2.11
LINC00400-201ENST00000425609 CDC42SE2Q9NRR3 84 aa1.84□□□□□ -2.11
LINC00400-201ENST00000425609 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.83□□□□□ -2.12
LINC00400-201ENST00000425609 TRBV27A0A0K0K1C4 114 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 A0A1B0GUT8 65 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 IGKV2-29A2NJV5 120 aaPredicted RBP1.83□□□□□ -2.12
LINC00400-201ENST00000425609 C7orf77A4D0Y5 90 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 MT-ND6P03923 174 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 S100A8P05109 93 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 DIRC1Q969H9 104 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 TMEM191AQ9H0A3 160 aa1.83□□□□□ -2.12
LINC00400-201ENST00000425609 ZNF727A8MUV8 499 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 F8W036 122 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 G0S2P27469 103 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 POLR2KP53803 58 aaKnown RBP1.82□□□□□ -2.12
LINC00400-201ENST00000425609 TCTE3Q8IZS6 198 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 NUP35Q8NFH5 326 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 SCGB3A1Q96QR1 104 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 C20orf78Q9BR46 151 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 OSTCQ9NRP0 149 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 MRPL35Q9NZE8 188 aaKnown RBP1.82□□□□□ -2.12
LINC00400-201ENST00000425609 CYSLTR1Q9Y271 337 aa1.82□□□□□ -2.12
LINC00400-201ENST00000425609 A0A096LNI7 61 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 NDUFA1O15239 70 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 CKS2P33552 79 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 UBE2D1P51668 147 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 SEC11AP67812 179 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 PEA15Q15121 130 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 C9orf116Q5BN46 136 aaPredicted RBP1.81□□□□□ -2.12
LINC00400-201ENST00000425609 C1orf137Q5JT78 98 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 COA5Q86WW8 74 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 RPL39LQ96EH5 51 aaKnown RBP1.81□□□□□ -2.12
LINC00400-201ENST00000425609 SMIM7Q9BQ49 75 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 SPANXA1Q9NS26 97 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 TMEM242Q9NWH2 141 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 NAT8BQ9UHF3 227 aa1.81□□□□□ -2.12
LINC00400-201ENST00000425609 HMCN2Q8NDA2 5059 aa1.8□□□□□ -2.12
LINC00400-201ENST00000425609 TRAV13-1A0A0B4J241 112 aa1.8□□□□□ -2.12
LINC00400-201ENST00000425609 LINC01549A6NIU2 74 aa1.8□□□□□ -2.12
LINC00400-201ENST00000425609 HIGD1CA8MV81 97 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms