RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 CBY1Q9Y3M2 126 aa13.28□□□□□ -0.28
HMGA2-205ENST00000425208 HIST1H4GQ99525 98 aa13.27□□□□□ -0.29
HMGA2-205ENST00000425208 ETDCA0A1B0GVM5 59 aa13.26□□□□□ -0.29
HMGA2-205ENST00000425208 HIGD1BQ9P298 99 aa13.26□□□□□ -0.29
HMGA2-205ENST00000425208 DMBT1Q9UGM3 2413 aaPredicted RBP13.25□□□□□ -0.29
HMGA2-205ENST00000425208 J3QL48 77 aa13.25□□□□□ -0.29
HMGA2-205ENST00000425208 KRTAP4-16G5E9R7 235 aaPredicted RBP13.23□□□□□ -0.29
HMGA2-205ENST00000425208 C2orf91Q6ZV80 131 aa13.22□□□□□ -0.29
HMGA2-205ENST00000425208 LINC01600Q96MT4 127 aa13.22□□□□□ -0.29
HMGA2-205ENST00000425208 ZNF73O43830 326 aaPredicted RBP13.22□□□□□ -0.29
HMGA2-205ENST00000425208 A4D1N5 150 aa13.21□□□□□ -0.3
HMGA2-205ENST00000425208 A6NDN8 102 aa13.21□□□□□ -0.3
HMGA2-205ENST00000425208 HIGD2AQ9BW72 106 aa13.21□□□□□ -0.3
HMGA2-205ENST00000425208 TRAV13-2A0A0B4J235 113 aa13.2□□□□□ -0.3
HMGA2-205ENST00000425208 B5MCH6 92 aa13.18□□□□□ -0.3
HMGA2-205ENST00000425208 HINT1P49773 126 aaPredicted RBP13.18□□□□□ -0.3
HMGA2-205ENST00000425208 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
HMGA2-205ENST00000425208 SMIM6P0DI80 62 aa13.17□□□□□ -0.3
HMGA2-205ENST00000425208 Q6ZRX8 168 aa13.17□□□□□ -0.3
HMGA2-205ENST00000425208 UQCR10Q9UDW1 63 aa13.15□□□□□ -0.3
HMGA2-205ENST00000425208 TAL2Q16559 108 aa13.14□□□□□ -0.31
HMGA2-205ENST00000425208 MT1HL1P0DM35 61 aa13.13□□□□□ -0.31
HMGA2-205ENST00000425208 C12orf57Q99622 126 aa13.13□□□□□ -0.31
HMGA2-205ENST00000425208 TNXBP22105 4242 aa13.12□□□□□ -0.31
HMGA2-205ENST00000425208 LOC105371267A0A1B0GV96 52 aa13.12□□□□□ -0.31
HMGA2-205ENST00000425208 C6orf99Q4VX62 202 aa13.12□□□□□ -0.31
HMGA2-205ENST00000425208 SMCR5Q8TEV8 140 aa13.12□□□□□ -0.31
HMGA2-205ENST00000425208 CEND1Q8N111 149 aa13.1□□□□□ -0.31
HMGA2-205ENST00000425208 Q9BRP9 147 aa13.1□□□□□ -0.31
HMGA2-205ENST00000425208 PRR26Q8N8Z3 221 aa13.09□□□□□ -0.31
HMGA2-205ENST00000425208 ZNF706Q9Y5V0 76 aaPredicted RBP13.09□□□□□ -0.31
HMGA2-205ENST00000425208 KRTAP10-8P60410 259 aa13.08□□□□□ -0.32
HMGA2-205ENST00000425208 TMEM238LA0A1B0GVL6 79 aa13.07□□□□□ -0.32
HMGA2-205ENST00000425208 A6NJY4 79 aa13.07□□□□□ -0.32
HMGA2-205ENST00000425208 COX7BP24311 80 aa13.07□□□□□ -0.32
HMGA2-205ENST00000425208 ELOF1P60002 83 aaKnown RBP13.07□□□□□ -0.32
HMGA2-205ENST00000425208 HSD52Q0P140 79 aa13.07□□□□□ -0.32
HMGA2-205ENST00000425208 SMIM11BQ8TCY0 68 aa13.07□□□□□ -0.32
HMGA2-205ENST00000425208 RPL13AP40429 203 aaKnown RBP13.06□□□□□ -0.32
HMGA2-205ENST00000425208 TRBV7-6A0A0J9YX20 115 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 SPRR4Q96PI1 79 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 ERC2-IT1O76042 136 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 CFC1P0CG37 223 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 CRYGAP11844 174 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 FAM229BQ4G0N7 80 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 RAB37Q96AX2 223 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 ANAPC11Q9NYG5 84 aa13.05□□□□□ -0.32
HMGA2-205ENST00000425208 A0A0B4J2C4 111 aa13.04□□□□□ -0.32
HMGA2-205ENST00000425208 A0A1B0GWB2 263 aa13.04□□□□□ -0.32
HMGA2-205ENST00000425208 PRO1933Q9H354 126 aa13.04□□□□□ -0.32
HMGA2-205ENST00000425208 DHRS4-AS1Q9P1J3 65 aa13.04□□□□□ -0.32
HMGA2-205ENST00000425208 A0A087X002 238 aa13.03□□□□□ -0.32
HMGA2-205ENST00000425208 FXYD2P54710 66 aa13.03□□□□□ -0.32
HMGA2-205ENST00000425208 HERC1Q15751 4861 aa13.02□□□□□ -0.32
HMGA2-205ENST00000425208 VAMP3Q15836 100 aa12.98□□□□□ -0.33
HMGA2-205ENST00000425208 H7C2G1 150 aa12.97□□□□□ -0.33
HMGA2-205ENST00000425208 GAGE2AQ6NT46 116 aa12.97□□□□□ -0.33
HMGA2-205ENST00000425208 LINC00483Q53H64 154 aa12.96□□□□□ -0.34
HMGA2-205ENST00000425208 TYMSOSQ8TAI1 123 aa12.96□□□□□ -0.34
HMGA2-205ENST00000425208 KRTAP13-2Q52LG2 175 aa12.95□□□□□ -0.34
HMGA2-205ENST00000425208 NHP2Q9NX24 153 aaKnown RBP12.95□□□□□ -0.34
HMGA2-205ENST00000425208 PRO1854Q9UHT4 67 aa12.95□□□□□ -0.34
HMGA2-205ENST00000425208 TSTD3H0UI37 97 aa12.94□□□□□ -0.34
HMGA2-205ENST00000425208 BVES-AS1Q5T3Y7 98 aa12.94□□□□□ -0.34
HMGA2-205ENST00000425208 ST20-AS1Q8NBB2 130 aa12.94□□□□□ -0.34
HMGA2-205ENST00000425208 Q1RN00 199 aa12.93□□□□□ -0.34
HMGA2-205ENST00000425208 SLC25A20O43772 301 aa12.91□□□□□ -0.34
HMGA2-205ENST00000425208 K7ERJ3 54 aa12.88□□□□□ -0.35
HMGA2-205ENST00000425208 C3orf22Q8N5N4 141 aa12.88□□□□□ -0.35
HMGA2-205ENST00000425208 CTAG1AP78358 180 aa12.88□□□□□ -0.35
HMGA2-205ENST00000425208 LINC00575Q6W349 94 aa12.88□□□□□ -0.35
HMGA2-205ENST00000425208 SPRR1BP22528 89 aa12.86□□□□□ -0.35
HMGA2-205ENST00000425208 hADV29S1A0JD25 119 aa12.85□□□□□ -0.35
HMGA2-205ENST00000425208 M0R143 59 aa12.85□□□□□ -0.35
HMGA2-205ENST00000425208 IGLV9-49A0A0B4J1Y8 123 aa12.84□□□□□ -0.35
HMGA2-205ENST00000425208 DEFB105AQ8NG35 78 aa12.84□□□□□ -0.35
HMGA2-205ENST00000425208 TEX49A0A1B0GTD5 131 aa12.82□□□□□ -0.36
HMGA2-205ENST00000425208 H0YGX0 51 aa12.82□□□□□ -0.36
HMGA2-205ENST00000425208 LINC00304Q8N9R0 145 aa12.81□□□□□ -0.36
HMGA2-205ENST00000425208 IGLV5-48A0A075B6I7 105 aa12.8□□□□□ -0.36
HMGA2-205ENST00000425208 MOBPQ13875 183 aa12.8□□□□□ -0.36
HMGA2-205ENST00000425208 TRIAP1O43715 76 aa12.79□□□□□ -0.36
HMGA2-205ENST00000425208 LINC01547P58512 204 aaPredicted RBP12.79□□□□□ -0.36
HMGA2-205ENST00000425208 C9orf153Q5TBE3 101 aa12.79□□□□□ -0.36
HMGA2-205ENST00000425208 Q6ZQY7 126 aa12.79□□□□□ -0.36
HMGA2-205ENST00000425208 LAMTOR3Q9UHA4 124 aa12.79□□□□□ -0.36
HMGA2-205ENST00000425208 SNCGO76070 127 aa12.78□□□□□ -0.36
HMGA2-205ENST00000425208 TSPAN13O95857 204 aa12.78□□□□□ -0.36
HMGA2-205ENST00000425208 PSMB2P49721 201 aa12.78□□□□□ -0.36
HMGA2-205ENST00000425208 Q8NBF4 154 aa12.77□□□□□ -0.37
HMGA2-205ENST00000425208 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.76□□□□□ -0.37
HMGA2-205ENST00000425208 SSBP3-AS1Q7Z2R9 100 aa12.76□□□□□ -0.37
HMGA2-205ENST00000425208 COX6CP09669 75 aa12.74□□□□□ -0.37
HMGA2-205ENST00000425208 FAM218AQ96MZ4 157 aa12.74□□□□□ -0.37
HMGA2-205ENST00000425208 Q8N377 158 aa12.73□□□□□ -0.37
HMGA2-205ENST00000425208 C4orf48Q5BLP8 95 aa12.72□□□□□ -0.37
HMGA2-205ENST00000425208 SPAG11AQ6PDA7 123 aa12.72□□□□□ -0.37
HMGA2-205ENST00000425208 A0A1B0GX51 115 aa12.71□□□□□ -0.37
HMGA2-205ENST00000425208 SMIM29Q86T20 159 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms