RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 KLKP1Q107X0 134 aa9.51□□□□□ -0.89
MSH5-206ENST00000423982 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.51□□□□□ -0.89
MSH5-206ENST00000423982 COX7BP24311 80 aa9.51□□□□□ -0.89
MSH5-206ENST00000423982 CXCL6P80162 114 aa9.5□□□□□ -0.89
MSH5-206ENST00000423982 MIFP14174 115 aa9.5□□□□□ -0.89
MSH5-206ENST00000423982 PRR34Q9NV39 138 aa9.5□□□□□ -0.89
MSH5-206ENST00000423982 LELP1Q5T871 98 aa9.49□□□□□ -0.89
MSH5-206ENST00000423982 KPRPQ5T749 579 aaPredicted RBP9.49□□□□□ -0.89
MSH5-206ENST00000423982 ELOF1P60002 83 aaKnown RBP9.48□□□□□ -0.89
MSH5-206ENST00000423982 SERP1Q9Y6X1 66 aa9.48□□□□□ -0.89
MSH5-206ENST00000423982 DNAH9Q9NYC9 4486 aa9.48□□□□□ -0.89
MSH5-206ENST00000423982 EPM2AB3EWF7 344 aa9.47□□□□□ -0.89
MSH5-206ENST00000423982 TGP01266 2768 aa9.47□□□□□ -0.89
MSH5-206ENST00000423982 VPREB1P12018 145 aa9.47□□□□□ -0.89
MSH5-206ENST00000423982 PDE6GP18545 87 aa9.47□□□□□ -0.89
MSH5-206ENST00000423982 BPY2O14599 106 aa9.46□□□□□ -0.9
MSH5-206ENST00000423982 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.9
MSH5-206ENST00000423982 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
MSH5-206ENST00000423982 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
MSH5-206ENST00000423982 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
MSH5-206ENST00000423982 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
MSH5-206ENST00000423982 BCE1O60756 84 aa9.45□□□□□ -0.9
MSH5-206ENST00000423982 WFDC10BQ8IUB3 73 aa9.45□□□□□ -0.9
MSH5-206ENST00000423982 NREPQ16612 68 aa9.45□□□□□ -0.9
MSH5-206ENST00000423982 Q6ZRU5 148 aa9.45□□□□□ -0.9
MSH5-206ENST00000423982 LINC00336Q6ZUF6 198 aa9.44□□□□□ -0.9
MSH5-206ENST00000423982 C3orf84H3BNL1 204 aa9.44□□□□□ -0.9
MSH5-206ENST00000423982 Q6ZTC4 211 aa9.43□□□□□ -0.9
MSH5-206ENST00000423982 FBN3Q75N90 2809 aa9.43□□□□□ -0.9
MSH5-206ENST00000423982 DEFB105AQ8NG35 78 aa9.42□□□□□ -0.9
MSH5-206ENST00000423982 LINC00528Q8N1L1 170 aa9.42□□□□□ -0.9
MSH5-206ENST00000423982 TRBV7-6A0A0J9YX20 115 aa9.41□□□□□ -0.9
MSH5-206ENST00000423982 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
MSH5-206ENST00000423982 IGKV4-1P06312 121 aa9.4□□□□□ -0.9
MSH5-206ENST00000423982 TMEM254Q8TBM7 123 aa9.4□□□□□ -0.9
MSH5-206ENST00000423982 M0R378 163 aa9.39□□□□□ -0.91
MSH5-206ENST00000423982 Q6ZRP5 223 aa9.39□□□□□ -0.91
MSH5-206ENST00000423982 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
MSH5-206ENST00000423982 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
MSH5-206ENST00000423982 FAM229BQ4G0N7 80 aa9.38□□□□□ -0.91
MSH5-206ENST00000423982 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
MSH5-206ENST00000423982 LYSTQ99698 3801 aa9.38□□□□□ -0.91
MSH5-206ENST00000423982 H3BQ85 93 aa9.38□□□□□ -0.91
MSH5-206ENST00000423982 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
MSH5-206ENST00000423982 SMIM26A0A096LP01 95 aa9.35□□□□□ -0.91
MSH5-206ENST00000423982 B9D2Q9BPU9 175 aa9.34□□□□□ -0.91
MSH5-206ENST00000423982 OCR1Q9BZK8 76 aa9.34□□□□□ -0.91
MSH5-206ENST00000423982 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
MSH5-206ENST00000423982 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
MSH5-206ENST00000423982 HIGD2AQ9BW72 106 aa9.34□□□□□ -0.91
MSH5-206ENST00000423982 DEFB131BA0A096LNP1 70 aa9.33□□□□□ -0.92
MSH5-206ENST00000423982 Q8N377 158 aa9.33□□□□□ -0.92
MSH5-206ENST00000423982 NDUFC1O43677 76 aa9.32□□□□□ -0.92
MSH5-206ENST00000423982 MPLKIPQ8TAP9 179 aa9.32□□□□□ -0.92
MSH5-206ENST00000423982 RPL37AP8A6NKH3 93 aa9.31□□□□□ -0.92
MSH5-206ENST00000423982 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
MSH5-206ENST00000423982 A0A0U1RQV1 116 aa9.3□□□□□ -0.92
MSH5-206ENST00000423982 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
MSH5-206ENST00000423982 PRYO14603 147 aa9.3□□□□□ -0.92
MSH5-206ENST00000423982 C7orf33Q8WU49 177 aa9.3□□□□□ -0.92
MSH5-206ENST00000423982 ESRGQ1W209 222 aa9.29□□□□□ -0.92
MSH5-206ENST00000423982 SMIM29Q86T20 159 aa9.29□□□□□ -0.92
MSH5-206ENST00000423982 PRO0628Q9UI54 55 aa9.29□□□□□ -0.92
MSH5-206ENST00000423982 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
MSH5-206ENST00000423982 ST20-AS1Q8NBB2 130 aa9.28□□□□□ -0.92
MSH5-206ENST00000423982 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.92
MSH5-206ENST00000423982 C1orf43Q9BWL3 253 aa9.27□□□□□ -0.92
MSH5-206ENST00000423982 A0A1W2PNM2 257 aa9.27□□□□□ -0.93
MSH5-206ENST00000423982 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
MSH5-206ENST00000423982 Q9BRP9 147 aa9.26□□□□□ -0.93
MSH5-206ENST00000423982 ERC2-IT1O76042 136 aa9.25□□□□□ -0.93
MSH5-206ENST00000423982 FUSP35637 526 aaKnown RBP eCLIP9.25□□□□□ -0.93
MSH5-206ENST00000423982 KCNQ1DNQ9H478 68 aa9.25□□□□□ -0.93
MSH5-206ENST00000423982 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
MSH5-206ENST00000423982 IGLV5-48A0A075B6I7 105 aa9.24□□□□□ -0.93
MSH5-206ENST00000423982 A0A0G2JQZ4 141 aa9.24□□□□□ -0.93
MSH5-206ENST00000423982 A0A1W2PNN7 141 aa9.24□□□□□ -0.93
MSH5-206ENST00000423982 BRK1Q8WUW1 75 aa9.24□□□□□ -0.93
MSH5-206ENST00000423982 LRCOL1A6NCL2 159 aa9.24□□□□□ -0.93
MSH5-206ENST00000423982 ATP5EP56381 51 aaPredicted RBP9.24□□□□□ -0.93
MSH5-206ENST00000423982 STARD9Q9P2P6 4700 aa9.22□□□□□ -0.93
MSH5-206ENST00000423982 DNAH7Q8WXX0 4024 aa9.22□□□□□ -0.93
MSH5-206ENST00000423982 PLECQ15149 4684 aaKnown RBP9.22□□□□□ -0.93
MSH5-206ENST00000423982 C1orf137Q5JT78 98 aa9.21□□□□□ -0.93
MSH5-206ENST00000423982 CASC10Q5T4H9 136 aa9.21□□□□□ -0.93
MSH5-206ENST00000423982 Q6ZRX8 168 aa9.21□□□□□ -0.94
MSH5-206ENST00000423982 KRTAP7-1Q8IUC3 87 aa9.19□□□□□ -0.94
MSH5-206ENST00000423982 K7EQZ3 153 aa9.19□□□□□ -0.94
MSH5-206ENST00000423982 DSCR10P59022 87 aa9.18□□□□□ -0.94
MSH5-206ENST00000423982 KRTAP4-16G5E9R7 235 aaPredicted RBP9.18□□□□□ -0.94
MSH5-206ENST00000423982 TNP2Q05952 138 aa9.18□□□□□ -0.94
MSH5-206ENST00000423982 SRRM2Q9UQ35 2752 aaKnown RBP9.17□□□□□ -0.94
MSH5-206ENST00000423982 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
MSH5-206ENST00000423982 ETDCA0A1B0GVM5 59 aa9.17□□□□□ -0.94
MSH5-206ENST00000423982 PRR4Q16378 134 aa9.17□□□□□ -0.94
MSH5-206ENST00000423982 Q8NBF4 154 aa9.16□□□□□ -0.94
MSH5-206ENST00000423982 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
MSH5-206ENST00000423982 LINC01556Q5JQF7 62 aa9.16□□□□□ -0.94
MSH5-206ENST00000423982 DHRS4-AS1Q9P1J3 65 aa9.15□□□□□ -0.94
MSH5-206ENST00000423982 H3BNG1 76 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms