RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 KRTAP13-3Q3SY46 172 aa9.14□□□□□ -0.95
COL18A1-205ENST00000423214 SOSTDC1Q6X4U4 206 aa9.14□□□□□ -0.95
COL18A1-205ENST00000423214 IGLV9-49A0A0B4J1Y8 123 aa9.13□□□□□ -0.95
COL18A1-205ENST00000423214 C3orf79P0CE67 100 aa9.13□□□□□ -0.95
COL18A1-205ENST00000423214 MOBPQ13875 183 aa9.13□□□□□ -0.95
COL18A1-205ENST00000423214 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
COL18A1-205ENST00000423214 GAGE2AQ6NT46 116 aa9.13□□□□□ -0.95
COL18A1-205ENST00000423214 PET117Q6UWS5 81 aa9.13□□□□□ -0.95
COL18A1-205ENST00000423214 TRBV10-2A0A0K0K1G8 114 aa9.12□□□□□ -0.95
COL18A1-205ENST00000423214 KRTDAPP60985 99 aa9.11□□□□□ -0.95
COL18A1-205ENST00000423214 SPANXB1Q9NS25 103 aaPredicted RBP9.11□□□□□ -0.95
COL18A1-205ENST00000423214 B5MCH6 92 aa9.1□□□□□ -0.95
COL18A1-205ENST00000423214 NDUFC2O95298 119 aa9.1□□□□□ -0.95
COL18A1-205ENST00000423214 ASB16-AS1Q495Z4 193 aa9.1□□□□□ -0.95
COL18A1-205ENST00000423214 COA6Q5JTJ3 125 aaKnown RBP9.1□□□□□ -0.95
COL18A1-205ENST00000423214 S100A7L2Q5SY68 101 aa9.1□□□□□ -0.95
COL18A1-205ENST00000423214 TTTY13Q9BZ97 58 aa9.1□□□□□ -0.95
COL18A1-205ENST00000423214 ERC2-IT1O76042 136 aa9.08□□□□□ -0.96
COL18A1-205ENST00000423214 SEC61BP60468 96 aaKnown RBP9.08□□□□□ -0.96
COL18A1-205ENST00000423214 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
COL18A1-205ENST00000423214 KRTAP9-6A0A140TA67 174 aa9.07□□□□□ -0.96
COL18A1-205ENST00000423214 ZNF815PA8K554 130 aa9.07□□□□□ -0.96
COL18A1-205ENST00000423214 IGLV6-57P01721 117 aa9.07□□□□□ -0.96
COL18A1-205ENST00000423214 Q6ZRX8 168 aa9.07□□□□□ -0.96
COL18A1-205ENST00000423214 SSBP3-AS1Q7Z2R9 100 aa9.07□□□□□ -0.96
COL18A1-205ENST00000423214 LITAFQ99732 161 aa9.07□□□□□ -0.96
COL18A1-205ENST00000423214 LINC01547P58512 204 aaPredicted RBP9.06□□□□□ -0.96
COL18A1-205ENST00000423214 Q8N377 158 aa9.06□□□□□ -0.96
COL18A1-205ENST00000423214 LINC00308Q8TCZ7 52 aa9.06□□□□□ -0.96
COL18A1-205ENST00000423214 TRAV23DV6A0A075B6W5 121 aa9.05□□□□□ -0.96
COL18A1-205ENST00000423214 SLC25A20O43772 301 aa9.05□□□□□ -0.96
COL18A1-205ENST00000423214 C9orf153Q5TBE3 101 aa9.05□□□□□ -0.96
COL18A1-205ENST00000423214 Q9BRP9 147 aa9.05□□□□□ -0.96
COL18A1-205ENST00000423214 JOSD1Q15040 202 aaPredicted RBP9.04□□□□□ -0.96
COL18A1-205ENST00000423214 ATOH7Q8N100 152 aa9.04□□□□□ -0.96
COL18A1-205ENST00000423214 TIMM17BO60830 172 aa9.03□□□□□ -0.96
COL18A1-205ENST00000423214 OR13C6PQ8NH95 151 aa9.03□□□□□ -0.96
COL18A1-205ENST00000423214 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.97
COL18A1-205ENST00000423214 C20orf202A1L168 122 aa9.01□□□□□ -0.97
COL18A1-205ENST00000423214 ZNF73O43830 326 aaPredicted RBP9.01□□□□□ -0.97
COL18A1-205ENST00000423214 SPANXCQ9NY87 97 aa9.01□□□□□ -0.97
COL18A1-205ENST00000423214 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
COL18A1-205ENST00000423214 KRTAP4-1Q9BYQ7 146 aa8.99□□□□□ -0.97
COL18A1-205ENST00000423214 ST20-AS1Q8NBB2 130 aa8.97□□□□□ -0.97
COL18A1-205ENST00000423214 CBY1Q9Y3M2 126 aa8.97□□□□□ -0.97
COL18A1-205ENST00000423214 HINT1P49773 126 aaPredicted RBP8.96□□□□□ -0.98
COL18A1-205ENST00000423214 XP32Q5T750 250 aa8.96□□□□□ -0.98
COL18A1-205ENST00000423214 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
COL18A1-205ENST00000423214 HIST3H2BBQ8N257 126 aa8.95□□□□□ -0.98
COL18A1-205ENST00000423214 SPANXDQ9BXN6 97 aa8.95□□□□□ -0.98
COL18A1-205ENST00000423214 LINC00518Q8N0U6 118 aa8.94□□□□□ -0.98
COL18A1-205ENST00000423214 S100A2P29034 98 aa8.93□□□□□ -0.98
COL18A1-205ENST00000423214 HIST1H2BLQ99880 126 aa8.93□□□□□ -0.98
COL18A1-205ENST00000423214 LIMD2Q9BT23 127 aa8.93□□□□□ -0.98
COL18A1-205ENST00000423214 C5orf52A6NGY3 159 aa8.92□□□□□ -0.98
COL18A1-205ENST00000423214 MUSTN1Q8IVN3 82 aa8.92□□□□□ -0.98
COL18A1-205ENST00000423214 S100A6P06703 90 aa8.91□□□□□ -0.98
COL18A1-205ENST00000423214 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
COL18A1-205ENST00000423214 SLC25A34Q6PIV7 304 aa8.91□□□□□ -0.98
COL18A1-205ENST00000423214 AKR1D1P51857 326 aa8.9□□□□□ -0.98
COL18A1-205ENST00000423214 SNRPEP62304 92 aaKnown RBP8.9□□□□□ -0.98
COL18A1-205ENST00000423214 IFITM1P13164 125 aa8.89□□□□□ -0.99
COL18A1-205ENST00000423214 COX7BP24311 80 aa8.89□□□□□ -0.99
COL18A1-205ENST00000423214 HRCT1Q6UXD1 115 aa8.89□□□□□ -0.99
COL18A1-205ENST00000423214 A6NDN8 102 aa8.88□□□□□ -0.99
COL18A1-205ENST00000423214 COPS9Q8WXC6 57 aa8.88□□□□□ -0.99
COL18A1-205ENST00000423214 DHRS4-AS1Q9P1J3 65 aa8.88□□□□□ -0.99
COL18A1-205ENST00000423214 ELOF1P60002 83 aaKnown RBP8.87□□□□□ -0.99
COL18A1-205ENST00000423214 Q6ZVH6 145 aa8.87□□□□□ -0.99
COL18A1-205ENST00000423214 LAMTOR3Q9UHA4 124 aa8.87□□□□□ -0.99
COL18A1-205ENST00000423214 SPRR1BP22528 89 aa8.85□□□□□ -0.99
COL18A1-205ENST00000423214 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
COL18A1-205ENST00000423214 DEFB105AQ8NG35 78 aa8.85□□□□□ -0.99
COL18A1-205ENST00000423214 C9orf92A6NGG3 77 aa8.84□□□□□ -0.99
COL18A1-205ENST00000423214 HSBP1L1C9JCN9 74 aa8.84□□□□□ -0.99
COL18A1-205ENST00000423214 TAL2Q16559 108 aa8.83□□□□□ -1
COL18A1-205ENST00000423214 PCOTHQ58A44 107 aa8.82□□□□□ -1
COL18A1-205ENST00000423214 IGLV8-61A0A075B6I0 122 aa8.81□□□□□ -1
COL18A1-205ENST00000423214 TRBV7-6A0A0J9YX20 115 aa8.81□□□□□ -1
COL18A1-205ENST00000423214 SCGB1D1O95968 90 aa8.81□□□□□ -1
COL18A1-205ENST00000423214 Q1RN00 199 aa8.81□□□□□ -1
COL18A1-205ENST00000423214 TRAV13-2A0A0B4J235 113 aa8.8□□□□□ -1
COL18A1-205ENST00000423214 A0A1B0GWB2 263 aa8.8□□□□□ -1
COL18A1-205ENST00000423214 SMIM11BQ8TCY0 68 aa8.8□□□□□ -1
COL18A1-205ENST00000423214 TMA7Q9Y2S6 64 aaKnown RBP8.79□□□□□ -1
COL18A1-205ENST00000423214 TEX49A0A1B0GTD5 131 aa8.78□□□□□ -1
COL18A1-205ENST00000423214 LCE2CQ5TA81 110 aa8.78□□□□□ -1
COL18A1-205ENST00000423214 PRO1933Q9H354 126 aa8.78□□□□□ -1
COL18A1-205ENST00000423214 A4D1N5 150 aa8.77□□□□□ -1.01
COL18A1-205ENST00000423214 H7C2G1 150 aa8.77□□□□□ -1.01
COL18A1-205ENST00000423214 CD164Q04900 197 aa8.77□□□□□ -1.01
COL18A1-205ENST00000423214 CFC1BP0CG36 223 aa8.75□□□□□ -1.01
COL18A1-205ENST00000423214 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
COL18A1-205ENST00000423214 MT1HP80294 61 aa8.74□□□□□ -1.01
COL18A1-205ENST00000423214 KRTAP19-2Q3LHN2 52 aa8.74□□□□□ -1.01
COL18A1-205ENST00000423214 CRCT1Q9UGL9 99 aa8.74□□□□□ -1.01
COL18A1-205ENST00000423214 C12orf57Q99622 126 aa8.73□□□□□ -1.01
COL18A1-205ENST00000423214 IGLV5-48A0A075B6I7 105 aa8.72□□□□□ -1.01
COL18A1-205ENST00000423214 A0A0G2JQZ4 141 aa8.72□□□□□ -1.01
COL18A1-205ENST00000423214 HIST1H4GQ99525 98 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms