RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 COX6CP09669 75 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 KIAA0087Q14695 138 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 NPBQ8NG41 125 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 TMEM141Q96I45 108 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 CHCHD5Q9BSY4 110 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 TRAV21A0A0B4J279 112 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 CXCL5P42830 114 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 C14orf178Q8N769 122 aaPredicted RBP2.41□□□□□ -2.02
CNGA1-203ENST00000420489 COPS9Q8WXC6 57 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 RPL39LQ96EH5 51 aaKnown RBP2.41□□□□□ -2.02
CNGA1-203ENST00000420489 USMG5Q96IX5 58 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 LENEPQ9Y5L5 61 aa2.41□□□□□ -2.02
CNGA1-203ENST00000420489 IGLV4-69A0A075B6H9 119 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3-66A0A0C4DH42 116 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 TRBV27A0A0K0K1C4 114 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 TRBV10-2A0A0K0K1G8 114 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 H3BNG1 76 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3-33P01772 117 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 NDPQ00604 133 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 SS18Q15532 418 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 C15orf32Q32M92 178 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 C2orf82Q6UX34 121 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 VSIG2Q96IQ7 327 aa2.4□□□□□ -2.02
CNGA1-203ENST00000420489 IGHV3OR16-12A0A075B7B8 117 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 IGHV3-74A0A0B4J1X5 117 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 TEX49A0A1B0GTD5 131 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 NPC2P61916 151 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 Q6ZQT7 251 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 GPHB5Q86YW7 130 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 TRBV30A0A0K0K1B3 111 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 ATOX1O00244 68 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 NXPH4O95158 308 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 TSPEAR-AS2P59090 65 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 ZNF56Q15929 161 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 PHF5AQ7RTV0 110 aaKnown RBP2.4□□□□□ -2.03
CNGA1-203ENST00000420489 TMEM263Q8WUH6 116 aaKnown RBP2.4□□□□□ -2.03
CNGA1-203ENST00000420489 ODF3Q96PU9 254 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 PSORS1C2Q9UIG4 136 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
CNGA1-203ENST00000420489 FSIP2Q5CZC0 6907 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 IGHV3-49A0A0A0MS15 119 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 IGIPA6NJ69 53 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 LEPROTO15243 131 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 ZNF876PQ49A33 203 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 MUSTN1Q8IVN3 82 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 NKAPP1Q8N9T2 125 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 FCGBPQ9Y6R7 5405 aaPredicted RBP2.39□□□□□ -2.03
CNGA1-203ENST00000420489 TRBV7-1A0A0A6YYK4 115 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 SDHAF1A6NFY7 115 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 TSHBP01222 138 aa2.39□□□□□ -2.03
CNGA1-203ENST00000420489 RPL39P62891 51 aaKnown RBP2.39□□□□□ -2.03
CNGA1-203ENST00000420489 IGHV3-64A0A075B6Q5 118 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 A0A0J9YX75 114 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 TMEM223A0PJW6 202 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 ACYP1P07311 99 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 SPART-AS1P0CW21 52 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 RNASE4P34096 147 aaKnown RBP2.38□□□□□ -2.03
CNGA1-203ENST00000420489 UBE2BP63146 152 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 PRR9Q5T870 116 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 ZFAND2AQ8N6M9 145 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 AMELXQ99217 191 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 ICOSQ9Y6W8 199 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 IGHV1OR15-1A0A075B7D0 117 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 A0A087WYN8 130 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 hADV29S1A0JD25 119 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 H7C423 109 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 K7EQG2 157 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 POLR2KP53803 58 aaKnown RBP2.38□□□□□ -2.03
CNGA1-203ENST00000420489 HAMPP81172 84 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 MRPS36P82909 103 aaKnown RBP2.38□□□□□ -2.03
CNGA1-203ENST00000420489 RHOHQ15669 191 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 LINC01554Q52M75 96 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 FAM74A4Q5TZK3 123 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
CNGA1-203ENST00000420489 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
CNGA1-203ENST00000420489 IGLV5-45A0A087WSX0 123 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 IGHV3-38A0A0C4DH36 116 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 A0A0J9YXY3 114 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 ZNF22P17026 224 aaPredicted RBP2.37□□□□□ -2.03
CNGA1-203ENST00000420489 HIST1H4AP62805 103 aaKnown RBP2.37□□□□□ -2.03
CNGA1-203ENST00000420489 SCXQ7RTU7 201 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 TRBV6-5A0A0K0K1A5 114 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 FAM223BA6NKX1 122 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 GNRH2O43555 120 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 RNASE3P12724 160 aaKnown RBP2.37□□□□□ -2.03
CNGA1-203ENST00000420489 LINC00315P59091 139 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 MT1HP80294 61 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 SPINK6Q6UWN8 80 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 FAM223AQ8IWN6 122 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 CELA1Q9UNI1 258 aa2.37□□□□□ -2.03
CNGA1-203ENST00000420489 IGHV3-30-3P0DP02 117 aa2.36□□□□□ -2.03
CNGA1-203ENST00000420489 FUSP35637 526 aaKnown RBP eCLIP2.36□□□□□ -2.03
CNGA1-203ENST00000420489 MIAQ16674 131 aa2.36□□□□□ -2.03
CNGA1-203ENST00000420489 ADAMTSL4-AS1Q5T5F5 129 aa2.36□□□□□ -2.03
CNGA1-203ENST00000420489 C7orf65Q6ZTY9 151 aa2.36□□□□□ -2.03
CNGA1-203ENST00000420489 LINC00643Q86TS7 51 aa2.36□□□□□ -2.03
CNGA1-203ENST00000420489 Q8N814 137 aa2.36□□□□□ -2.03
CNGA1-203ENST00000420489 CLEC2BQ92478 149 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms