RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 Q6ZVQ6 151 aa17.26■□□□□ 0.35
FOXA2-202ENST00000419308 SERP2Q8N6R1 65 aa17.25■□□□□ 0.35
FOXA2-202ENST00000419308 CRYGAP11844 174 aa17.23■□□□□ 0.35
FOXA2-202ENST00000419308 UPK3BQ9BT76 320 aa17.23■□□□□ 0.35
FOXA2-202ENST00000419308 HUWE1Q7Z6Z7 4374 aaKnown RBP17.23■□□□□ 0.35
FOXA2-202ENST00000419308 LINC01547P58512 204 aaPredicted RBP17.23■□□□□ 0.35
FOXA2-202ENST00000419308 PLA2G2DQ9UNK4 145 aa17.22■□□□□ 0.35
FOXA2-202ENST00000419308 DNAH1Q9P2D7 4330 aa17.21■□□□□ 0.35
FOXA2-202ENST00000419308 HAMPP81172 84 aa17.2■□□□□ 0.34
FOXA2-202ENST00000419308 SVIPQ8NHG7 77 aa17.19■□□□□ 0.34
FOXA2-202ENST00000419308 FAM168BA1KXE4 195 aa17.19■□□□□ 0.34
FOXA2-202ENST00000419308 RMI2Q96E14 147 aa17.19■□□□□ 0.34
FOXA2-202ENST00000419308 RPL37AP8A6NKH3 93 aa17.15■□□□□ 0.34
FOXA2-202ENST00000419308 IGLV5-37A0A075B6J1 123 aa17.15■□□□□ 0.34
FOXA2-202ENST00000419308 KRTAP7-1Q8IUC3 87 aa17.13■□□□□ 0.33
FOXA2-202ENST00000419308 CXCL6P80162 114 aa17.13■□□□□ 0.33
FOXA2-202ENST00000419308 CYSTM1Q9H1C7 97 aa17.13■□□□□ 0.33
FOXA2-202ENST00000419308 IGLV1-50A0A075B6I6 118 aa17.12■□□□□ 0.33
FOXA2-202ENST00000419308 MGAM2Q2M2H8 2515 aa17.11■□□□□ 0.33
FOXA2-202ENST00000419308 KRTAP4-16G5E9R7 235 aaPredicted RBP17.11■□□□□ 0.33
FOXA2-202ENST00000419308 Q6ZRX8 168 aa17.11■□□□□ 0.33
FOXA2-202ENST00000419308 Q8N377 158 aa17.1■□□□□ 0.33
FOXA2-202ENST00000419308 SMIM20Q8N5G0 67 aa17.1■□□□□ 0.33
FOXA2-202ENST00000419308 DEFB105AQ8NG35 78 aa17.1■□□□□ 0.33
FOXA2-202ENST00000419308 PRYO14603 147 aa17.09■□□□□ 0.33
FOXA2-202ENST00000419308 SPRR1AP35321 89 aa17.08■□□□□ 0.32
FOXA2-202ENST00000419308 Q9BRP9 147 aa17.07■□□□□ 0.32
FOXA2-202ENST00000419308 DHRS4-AS1Q9P1J3 65 aa17.07■□□□□ 0.32
FOXA2-202ENST00000419308 LOC107984640A0A0U1RRK4 108 aa17.05■□□□□ 0.32
FOXA2-202ENST00000419308 FAM19A5Q7Z5A7 132 aaPredicted RBP17.05■□□□□ 0.32
FOXA2-202ENST00000419308 ETDCA0A1B0GVM5 59 aa17.04■□□□□ 0.32
FOXA2-202ENST00000419308 SCXQ7RTU7 201 aa17.03■□□□□ 0.32
FOXA2-202ENST00000419308 MRPL55Q7Z7F7 128 aaKnown RBP17.03■□□□□ 0.32
FOXA2-202ENST00000419308 STAB2Q8WWQ8 2551 aa17.03■□□□□ 0.32
FOXA2-202ENST00000419308 COL7A1Q02388 2944 aa17.01■□□□□ 0.31
FOXA2-202ENST00000419308 IGLV5-48A0A075B6I7 105 aa17.01■□□□□ 0.31
FOXA2-202ENST00000419308 KRTAP1-5Q9BYS1 174 aa17.01■□□□□ 0.31
FOXA2-202ENST00000419308 LYSTQ99698 3801 aa17■□□□□ 0.31
FOXA2-202ENST00000419308 BCE1O60756 84 aa16.98■□□□□ 0.31
FOXA2-202ENST00000419308 ST20-AS1Q8NBB2 130 aa16.96■□□□□ 0.3
FOXA2-202ENST00000419308 C3orf84H3BNL1 204 aa16.93■□□□□ 0.3
FOXA2-202ENST00000419308 DNAH10Q8IVF4 4471 aa16.93■□□□□ 0.3
FOXA2-202ENST00000419308 ERC2-IT1O76042 136 aa16.92■□□□□ 0.3
FOXA2-202ENST00000419308 NREPQ16612 68 aa16.92■□□□□ 0.3
FOXA2-202ENST00000419308 TRAV7A0A075B6U4 112 aa16.91■□□□□ 0.3
FOXA2-202ENST00000419308 TMEM258P61165 79 aa16.91■□□□□ 0.3
FOXA2-202ENST00000419308 TNP2Q05952 138 aa16.91■□□□□ 0.3
FOXA2-202ENST00000419308 REG3GQ6UW15 175 aa16.89■□□□□ 0.29
FOXA2-202ENST00000419308 UBE2BP63146 152 aa16.89■□□□□ 0.29
FOXA2-202ENST00000419308 C20orf197Q8N268 126 aa16.89■□□□□ 0.29
FOXA2-202ENST00000419308 A0A096LNI7 61 aa16.88■□□□□ 0.29
FOXA2-202ENST00000419308 CNBPP62633 177 aaKnown RBP16.87■□□□□ 0.29
FOXA2-202ENST00000419308 PSCAO43653 123 aa16.87■□□□□ 0.29
FOXA2-202ENST00000419308 APLNQ9ULZ1 77 aa16.86■□□□□ 0.29
FOXA2-202ENST00000419308 UBE2DNLQ8IWF7 75 aa16.86■□□□□ 0.29
FOXA2-202ENST00000419308 Q8N9L7 120 aa16.86■□□□□ 0.29
FOXA2-202ENST00000419308 DNAH9Q9NYC9 4486 aa16.85■□□□□ 0.29
FOXA2-202ENST00000419308 A0A1W2PNM2 257 aa16.85■□□□□ 0.29
FOXA2-202ENST00000419308 C16orf90A8MZG2 172 aa16.85■□□□□ 0.29
FOXA2-202ENST00000419308 C1orf137Q5JT78 98 aa16.85■□□□□ 0.29
FOXA2-202ENST00000419308 IGKV2-24A0A0C4DH68 120 aa16.85■□□□□ 0.29
FOXA2-202ENST00000419308 FUSP35637 526 aaKnown RBP eCLIP16.85■□□□□ 0.29
FOXA2-202ENST00000419308 IGKV4-1P06312 121 aa16.82■□□□□ 0.28
FOXA2-202ENST00000419308 A0A1W2PNN7 141 aa16.81■□□□□ 0.28
FOXA2-202ENST00000419308 A0A1B0GW54 56 aa16.81■□□□□ 0.28
FOXA2-202ENST00000419308 BPY2O14599 106 aa16.81■□□□□ 0.28
FOXA2-202ENST00000419308 J3KT08 172 aa16.79■□□□□ 0.28
FOXA2-202ENST00000419308 Q8NBF4 154 aa16.78■□□□□ 0.28
FOXA2-202ENST00000419308 TENM2Q9NT68 2774 aa16.77■□□□□ 0.28
FOXA2-202ENST00000419308 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.77■□□□□ 0.28
FOXA2-202ENST00000419308 CSMD3Q7Z407 3707 aa16.76■□□□□ 0.27
FOXA2-202ENST00000419308 SMIM29Q86T20 159 aa16.76■□□□□ 0.27
FOXA2-202ENST00000419308 DPH3Q96FX2 82 aa16.76■□□□□ 0.27
FOXA2-202ENST00000419308 RPS28P62857 69 aaKnown RBP16.75■□□□□ 0.27
FOXA2-202ENST00000419308 SPRR4Q96PI1 79 aa16.74■□□□□ 0.27
FOXA2-202ENST00000419308 DYNC2H1Q8NCM8 4307 aaKnown RBP16.74■□□□□ 0.27
FOXA2-202ENST00000419308 DNAH7Q8WXX0 4024 aa16.74■□□□□ 0.27
FOXA2-202ENST00000419308 B9D2Q9BPU9 175 aa16.74■□□□□ 0.27
FOXA2-202ENST00000419308 PRLHP81277 87 aa16.73■□□□□ 0.27
FOXA2-202ENST00000419308 KLKP1Q107X0 134 aa16.72■□□□□ 0.27
FOXA2-202ENST00000419308 C14orf177Q52M58 125 aa16.72■□□□□ 0.27
FOXA2-202ENST00000419308 MDFIQ99750 246 aa16.71■□□□□ 0.27
FOXA2-202ENST00000419308 H7BZZ5 65 aa16.68■□□□□ 0.26
FOXA2-202ENST00000419308 CHTF8P0CG12 524 aa16.68■□□□□ 0.26
FOXA2-202ENST00000419308 SNURFQ9Y675 71 aa16.68■□□□□ 0.26
FOXA2-202ENST00000419308 LINC00476Q8WZB0 136 aa16.68■□□□□ 0.26
FOXA2-202ENST00000419308 F8WEM9 126 aa16.65■□□□□ 0.26
FOXA2-202ENST00000419308 HIGD2AQ9BW72 106 aa16.65■□□□□ 0.26
FOXA2-202ENST00000419308 KRTAP11-1Q8IUC1 163 aa16.64■□□□□ 0.25
FOXA2-202ENST00000419308 PHF5AQ7RTV0 110 aaKnown RBP16.64■□□□□ 0.25
FOXA2-202ENST00000419308 LRCOL1A6NCL2 159 aa16.63■□□□□ 0.25
FOXA2-202ENST00000419308 PLECQ15149 4684 aaKnown RBP16.63■□□□□ 0.25
FOXA2-202ENST00000419308 A0A0G2JQZ4 141 aa16.61■□□□□ 0.25
FOXA2-202ENST00000419308 C9orf163Q8N9P6 203 aa16.61■□□□□ 0.25
FOXA2-202ENST00000419308 NBDYA0A0U1RRE5 68 aa16.61■□□□□ 0.25
FOXA2-202ENST00000419308 OCR1Q9BZK8 76 aa16.61■□□□□ 0.25
FOXA2-202ENST00000419308 IGFL1Q6UW32 110 aa16.6■□□□□ 0.25
FOXA2-202ENST00000419308 OXTP01178 125 aa16.59■□□□□ 0.25
FOXA2-202ENST00000419308 FAM236DA0A1B0GTK5 79 aa16.58■□□□□ 0.25
FOXA2-202ENST00000419308 FAM236CP0DP71 79 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms