RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 SDIM1Q6ZPB5 146 aa11.59□□□□□ -0.55
RTN4R-202ENST00000416372 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
RTN4R-202ENST00000416372 IGKV2-24A0A0C4DH68 120 aa11.58□□□□□ -0.56
RTN4R-202ENST00000416372 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
RTN4R-202ENST00000416372 C7orf33Q8WU49 177 aa11.58□□□□□ -0.56
RTN4R-202ENST00000416372 PKIGQ9Y2B9 76 aa11.58□□□□□ -0.56
RTN4R-202ENST00000416372 LINC00643Q86TS7 51 aa11.56□□□□□ -0.56
RTN4R-202ENST00000416372 DIRC1Q969H9 104 aa11.56□□□□□ -0.56
RTN4R-202ENST00000416372 ZNF73O43830 326 aaPredicted RBP11.56□□□□□ -0.56
RTN4R-202ENST00000416372 KRTAP7-1Q8IUC3 87 aa11.55□□□□□ -0.56
RTN4R-202ENST00000416372 KMT2CQ8NEZ4 4911 aaKnown RBP11.55□□□□□ -0.56
RTN4R-202ENST00000416372 OBSCN-AS1Q96MR7 158 aa11.54□□□□□ -0.56
RTN4R-202ENST00000416372 LINC00167Q96N53 147 aa11.53□□□□□ -0.56
RTN4R-202ENST00000416372 MRPL55Q7Z7F7 128 aaKnown RBP11.52□□□□□ -0.57
RTN4R-202ENST00000416372 CHTF8P0CG12 524 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 KCNQ1DNQ9H478 68 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 TRBV7-6A0A0J9YX20 115 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 COX7BP24311 80 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 LINC00575Q6W349 94 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 SMCR5Q8TEV8 140 aa11.51□□□□□ -0.57
RTN4R-202ENST00000416372 A0A1W2PNN7 141 aa11.5□□□□□ -0.57
RTN4R-202ENST00000416372 IGLV1-50A0A075B6I6 118 aa11.49□□□□□ -0.57
RTN4R-202ENST00000416372 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
RTN4R-202ENST00000416372 LINC00474Q9P2X8 69 aa11.49□□□□□ -0.57
RTN4R-202ENST00000416372 RTL8CO15255 209 aa11.49□□□□□ -0.57
RTN4R-202ENST00000416372 GAGE2AQ6NT46 116 aa11.49□□□□□ -0.57
RTN4R-202ENST00000416372 ELOF1P60002 83 aaKnown RBP11.48□□□□□ -0.57
RTN4R-202ENST00000416372 hADV29S1A0JD25 119 aa11.47□□□□□ -0.57
RTN4R-202ENST00000416372 PRYO14603 147 aa11.47□□□□□ -0.57
RTN4R-202ENST00000416372 FUSP35637 526 aaKnown RBP eCLIP11.47□□□□□ -0.57
RTN4R-202ENST00000416372 TNP2Q05952 138 aa11.47□□□□□ -0.57
RTN4R-202ENST00000416372 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
RTN4R-202ENST00000416372 DNAH6Q9C0G6 4158 aa11.46□□□□□ -0.58
RTN4R-202ENST00000416372 IGLV5-52A0A0A0MRZ9 124 aa11.45□□□□□ -0.58
RTN4R-202ENST00000416372 DPH3Q96FX2 82 aa11.44□□□□□ -0.58
RTN4R-202ENST00000416372 C14orf132Q9NPU4 83 aa11.44□□□□□ -0.58
RTN4R-202ENST00000416372 LINC00528Q8N1L1 170 aa11.43□□□□□ -0.58
RTN4R-202ENST00000416372 H3BQ85 93 aa11.42□□□□□ -0.58
RTN4R-202ENST00000416372 PANO1I0J062 215 aa11.42□□□□□ -0.58
RTN4R-202ENST00000416372 RYR3Q15413 4870 aa11.42□□□□□ -0.58
RTN4R-202ENST00000416372 DNAH2Q9P225 4427 aa11.42□□□□□ -0.58
RTN4R-202ENST00000416372 JMJD7-PLA2G4BH0Y9G9 81 aa11.41□□□□□ -0.58
RTN4R-202ENST00000416372 TMEM256-PLSCR3K7ERE1 68 aa11.41□□□□□ -0.58
RTN4R-202ENST00000416372 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
RTN4R-202ENST00000416372 CCDC179H3BU77 68 aa11.41□□□□□ -0.58
RTN4R-202ENST00000416372 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.41□□□□□ -0.58
RTN4R-202ENST00000416372 FAM236AA0A1B0GUQ0 79 aa11.4□□□□□ -0.58
RTN4R-202ENST00000416372 FAM236BA0A1B0GV22 79 aa11.4□□□□□ -0.58
RTN4R-202ENST00000416372 SPRR1AP35321 89 aa11.4□□□□□ -0.58
RTN4R-202ENST00000416372 REG3GQ6UW15 175 aa11.4□□□□□ -0.58
RTN4R-202ENST00000416372 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
RTN4R-202ENST00000416372 PHF5AQ7RTV0 110 aaKnown RBP11.39□□□□□ -0.59
RTN4R-202ENST00000416372 B5MCH6 92 aa11.39□□□□□ -0.59
RTN4R-202ENST00000416372 Q6JHZ5 121 aa11.39□□□□□ -0.59
RTN4R-202ENST00000416372 Q6ZQY7 126 aa11.39□□□□□ -0.59
RTN4R-202ENST00000416372 KRTAP4-16G5E9R7 235 aaPredicted RBP11.38□□□□□ -0.59
RTN4R-202ENST00000416372 UBE2BP63146 152 aa11.38□□□□□ -0.59
RTN4R-202ENST00000416372 CCKP06307 115 aa11.37□□□□□ -0.59
RTN4R-202ENST00000416372 Q6ZRX8 168 aa11.37□□□□□ -0.59
RTN4R-202ENST00000416372 LCE6AA0A183 80 aa11.36□□□□□ -0.59
RTN4R-202ENST00000416372 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.36□□□□□ -0.59
RTN4R-202ENST00000416372 GHRHP01286 108 aa11.36□□□□□ -0.59
RTN4R-202ENST00000416372 LINC00846Q9NV44 126 aa11.34□□□□□ -0.59
RTN4R-202ENST00000416372 DHRS4-AS1Q9P1J3 65 aa11.34□□□□□ -0.59
RTN4R-202ENST00000416372 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
RTN4R-202ENST00000416372 KRTAP10-2P60368 255 aa11.33□□□□□ -0.6
RTN4R-202ENST00000416372 HIST1H4AP62805 103 aaKnown RBP11.33□□□□□ -0.6
RTN4R-202ENST00000416372 EPM2AB3EWF7 344 aa11.31□□□□□ -0.6
RTN4R-202ENST00000416372 KRTAP11-1Q8IUC1 163 aa11.31□□□□□ -0.6
RTN4R-202ENST00000416372 Q9BRP9 147 aa11.31□□□□□ -0.6
RTN4R-202ENST00000416372 FAM19A1Q7Z5A9 133 aa11.3□□□□□ -0.6
RTN4R-202ENST00000416372 SS18L2Q9UHA2 77 aa11.3□□□□□ -0.6
RTN4R-202ENST00000416372 ATP5EP2Q5VTU8 51 aa11.29□□□□□ -0.6
RTN4R-202ENST00000416372 ATOX1O00244 68 aa11.28□□□□□ -0.6
RTN4R-202ENST00000416372 HECTD4Q9Y4D8 3996 aa11.28□□□□□ -0.6
RTN4R-202ENST00000416372 PLAC8Q9NZF1 115 aa11.28□□□□□ -0.6
RTN4R-202ENST00000416372 SACSQ9NZJ4 4579 aa11.27□□□□□ -0.6
RTN4R-202ENST00000416372 UQCRQO14949 82 aa11.27□□□□□ -0.61
RTN4R-202ENST00000416372 C3orf22Q8N5N4 141 aa11.27□□□□□ -0.61
RTN4R-202ENST00000416372 LAMTOR3Q9UHA4 124 aa11.27□□□□□ -0.61
RTN4R-202ENST00000416372 PRLHP81277 87 aa11.26□□□□□ -0.61
RTN4R-202ENST00000416372 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
RTN4R-202ENST00000416372 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
RTN4R-202ENST00000416372 RYR2Q92736 4967 aa11.25□□□□□ -0.61
RTN4R-202ENST00000416372 FRAS1Q86XX4 4008 aa11.25□□□□□ -0.61
RTN4R-202ENST00000416372 IGKV3D-7A0A0C4DH55 119 aa11.24□□□□□ -0.61
RTN4R-202ENST00000416372 DEFB105AQ8NG35 78 aa11.24□□□□□ -0.61
RTN4R-202ENST00000416372 ERC2-IT1O76042 136 aa11.23□□□□□ -0.61
RTN4R-202ENST00000416372 RBM3P98179 157 aaKnown RBP11.23□□□□□ -0.61
RTN4R-202ENST00000416372 BCE1O60756 84 aa11.22□□□□□ -0.61
RTN4R-202ENST00000416372 COX7CP15954 63 aa11.22□□□□□ -0.61
RTN4R-202ENST00000416372 PDE6GP18545 87 aa11.21□□□□□ -0.61
RTN4R-202ENST00000416372 UBE2AP49459 152 aa11.21□□□□□ -0.61
RTN4R-202ENST00000416372 Q6ZQT0 140 aa11.21□□□□□ -0.61
RTN4R-202ENST00000416372 ST20-AS1Q8NBB2 130 aa11.21□□□□□ -0.61
RTN4R-202ENST00000416372 HIGD2AQ9BW72 106 aa11.21□□□□□ -0.61
RTN4R-202ENST00000416372 H0Y9J4 135 aa11.21□□□□□ -0.62
RTN4R-202ENST00000416372 C9orf153Q5TBE3 101 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms