RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 NCR3O14931 201 aa9.53□□□□□ -0.88
SGCE-202ENST00000415788 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
SGCE-202ENST00000415788 PFN2P35080 140 aa9.52□□□□□ -0.89
SGCE-202ENST00000415788 TRBV10-3A0A0K0K1G6 114 aa9.51□□□□□ -0.89
SGCE-202ENST00000415788 TMEM256-PLSCR3K7ERE1 68 aa9.51□□□□□ -0.89
SGCE-202ENST00000415788 Q8N814 137 aa9.51□□□□□ -0.89
SGCE-202ENST00000415788 DPH3Q96FX2 82 aa9.51□□□□□ -0.89
SGCE-202ENST00000415788 NDUFC2-KCTD14E9PQ53 114 aa9.51□□□□□ -0.89
SGCE-202ENST00000415788 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
SGCE-202ENST00000415788 Q8IZM0 81 aa9.5□□□□□ -0.89
SGCE-202ENST00000415788 A0A087WVE0 104 aa9.49□□□□□ -0.89
SGCE-202ENST00000415788 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
SGCE-202ENST00000415788 NDUFC2O95298 119 aa9.49□□□□□ -0.89
SGCE-202ENST00000415788 C15orf56Q8N910 161 aa9.49□□□□□ -0.89
SGCE-202ENST00000415788 SLPIP03973 132 aa9.49□□□□□ -0.89
SGCE-202ENST00000415788 CYSTM1Q9H1C7 97 aa9.48□□□□□ -0.89
SGCE-202ENST00000415788 DNAH2Q9P225 4427 aa9.48□□□□□ -0.89
SGCE-202ENST00000415788 BCE1O60756 84 aa9.47□□□□□ -0.89
SGCE-202ENST00000415788 ZNF561-AS1K7EIQ3 104 aa9.47□□□□□ -0.89
SGCE-202ENST00000415788 COX17Q14061 63 aa9.47□□□□□ -0.89
SGCE-202ENST00000415788 A0A1B0GVY2 172 aa9.46□□□□□ -0.9
SGCE-202ENST00000415788 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
SGCE-202ENST00000415788 UBL5Q9BZL1 73 aa9.45□□□□□ -0.9
SGCE-202ENST00000415788 RYR3Q15413 4870 aa9.45□□□□□ -0.9
SGCE-202ENST00000415788 GHRHP01286 108 aa9.45□□□□□ -0.9
SGCE-202ENST00000415788 SPAG11BQ08648 103 aa9.45□□□□□ -0.9
SGCE-202ENST00000415788 DNAH17Q9UFH2 4485 aa9.44□□□□□ -0.9
SGCE-202ENST00000415788 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.44□□□□□ -0.9
SGCE-202ENST00000415788 F8WDY8 70 aa9.44□□□□□ -0.9
SGCE-202ENST00000415788 CNBPP62633 177 aaKnown RBP9.43□□□□□ -0.9
SGCE-202ENST00000415788 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
SGCE-202ENST00000415788 H3BQ85 93 aa9.41□□□□□ -0.9
SGCE-202ENST00000415788 KRTAP10-2P60368 255 aa9.41□□□□□ -0.9
SGCE-202ENST00000415788 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
SGCE-202ENST00000415788 CAMK2N2Q96S95 79 aa9.4□□□□□ -0.9
SGCE-202ENST00000415788 DNAH10Q8IVF4 4471 aa9.4□□□□□ -0.9
SGCE-202ENST00000415788 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
SGCE-202ENST00000415788 SYCNQ0VAF6 134 aa9.4□□□□□ -0.91
SGCE-202ENST00000415788 DSCR8Q96T75 97 aa9.4□□□□□ -0.91
SGCE-202ENST00000415788 FRAS1Q86XX4 4008 aa9.39□□□□□ -0.91
SGCE-202ENST00000415788 LOC110117498A0A087WWA1 95 aa9.39□□□□□ -0.91
SGCE-202ENST00000415788 TRAV23DV6A0A075B6W5 121 aa9.38□□□□□ -0.91
SGCE-202ENST00000415788 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
SGCE-202ENST00000415788 C9orf163Q8N9P6 203 aa9.38□□□□□ -0.91
SGCE-202ENST00000415788 PDE6GP18545 87 aa9.37□□□□□ -0.91
SGCE-202ENST00000415788 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
SGCE-202ENST00000415788 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
SGCE-202ENST00000415788 PKIGQ9Y2B9 76 aa9.37□□□□□ -0.91
SGCE-202ENST00000415788 TRAV7A0A075B6U4 112 aa9.36□□□□□ -0.91
SGCE-202ENST00000415788 Q6ZQT0 140 aa9.36□□□□□ -0.91
SGCE-202ENST00000415788 C16orf90A8MZG2 172 aa9.36□□□□□ -0.91
SGCE-202ENST00000415788 OXTP01178 125 aa9.36□□□□□ -0.91
SGCE-202ENST00000415788 Q6ZRU5 148 aa9.36□□□□□ -0.91
SGCE-202ENST00000415788 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
SGCE-202ENST00000415788 C6orf99Q4VX62 202 aa9.35□□□□□ -0.91
SGCE-202ENST00000415788 UNQ6190/PRO20217Q6UXQ8 127 aa9.34□□□□□ -0.91
SGCE-202ENST00000415788 FAM236DA0A1B0GTK5 79 aa9.34□□□□□ -0.91
SGCE-202ENST00000415788 FAM236CP0DP71 79 aa9.34□□□□□ -0.91
SGCE-202ENST00000415788 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
SGCE-202ENST00000415788 Q5XG85 94 aa9.33□□□□□ -0.92
SGCE-202ENST00000415788 C20orf197Q8N268 126 aa9.33□□□□□ -0.92
SGCE-202ENST00000415788 C10orf25Q5T742 122 aa9.32□□□□□ -0.92
SGCE-202ENST00000415788 CXCL6P80162 114 aa9.32□□□□□ -0.92
SGCE-202ENST00000415788 C6orf48Q9UBA6 75 aa9.32□□□□□ -0.92
SGCE-202ENST00000415788 EPM2AB3EWF7 344 aa9.31□□□□□ -0.92
SGCE-202ENST00000415788 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
SGCE-202ENST00000415788 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
SGCE-202ENST00000415788 KLKP1Q107X0 134 aa9.3□□□□□ -0.92
SGCE-202ENST00000415788 LAMTOR3Q9UHA4 124 aa9.3□□□□□ -0.92
SGCE-202ENST00000415788 TLX1NBP0CAT3 122 aa9.3□□□□□ -0.92
SGCE-202ENST00000415788 KRTAP10-1P60331 282 aa9.29□□□□□ -0.92
SGCE-202ENST00000415788 H7BZZ5 65 aa9.28□□□□□ -0.92
SGCE-202ENST00000415788 C4orf26Q17RF5 130 aa9.28□□□□□ -0.92
SGCE-202ENST00000415788 Q6ZVQ6 151 aa9.28□□□□□ -0.92
SGCE-202ENST00000415788 IGLV6-57P01721 117 aa9.28□□□□□ -0.92
SGCE-202ENST00000415788 LINC00474Q9P2X8 69 aa9.28□□□□□ -0.92
SGCE-202ENST00000415788 PKD1P98161 4303 aa9.26□□□□□ -0.93
SGCE-202ENST00000415788 NDUFC1O43677 76 aa9.25□□□□□ -0.93
SGCE-202ENST00000415788 HAMPP81172 84 aa9.25□□□□□ -0.93
SGCE-202ENST00000415788 C9orf116Q5BN46 136 aaPredicted RBP9.25□□□□□ -0.93
SGCE-202ENST00000415788 Q6ZSA8 131 aa9.25□□□□□ -0.93
SGCE-202ENST00000415788 DNAH11Q96DT5 4516 aa9.25□□□□□ -0.93
SGCE-202ENST00000415788 HRCT1Q6UXD1 115 aa9.25□□□□□ -0.93
SGCE-202ENST00000415788 Q8NDZ9 215 aa9.25□□□□□ -0.93
SGCE-202ENST00000415788 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.24□□□□□ -0.93
SGCE-202ENST00000415788 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
SGCE-202ENST00000415788 A0A096LNI7 61 aa9.23□□□□□ -0.93
SGCE-202ENST00000415788 ATP5EP56381 51 aaPredicted RBP9.23□□□□□ -0.93
SGCE-202ENST00000415788 Q6ZRP5 223 aa9.23□□□□□ -0.93
SGCE-202ENST00000415788 Q6ZQY7 126 aa9.23□□□□□ -0.93
SGCE-202ENST00000415788 IGKV2-24A0A0C4DH68 120 aa9.22□□□□□ -0.93
SGCE-202ENST00000415788 TRBV7-6A0A0J9YX20 115 aa9.22□□□□□ -0.93
SGCE-202ENST00000415788 SPACA4Q8TDM5 124 aa9.22□□□□□ -0.93
SGCE-202ENST00000415788 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
SGCE-202ENST00000415788 TRBV7-4A0A0J9YYF1 115 aa9.21□□□□□ -0.93
SGCE-202ENST00000415788 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.21□□□□□ -0.93
SGCE-202ENST00000415788 CHTF8P0CG12 524 aa9.21□□□□□ -0.94
SGCE-202ENST00000415788 FAM30AQ9NZY2 134 aa9.21□□□□□ -0.94
SGCE-202ENST00000415788 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
SGCE-202ENST00000415788 PANO1I0J062 215 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms