RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
CHD1-202ENST00000414220 OR13C6PQ8NH95 151 aa8.79□□□□□ -1
CHD1-202ENST00000414220 SPANXDQ9BXN6 97 aa8.79□□□□□ -1
CHD1-202ENST00000414220 JOSD1Q15040 202 aaPredicted RBP8.78□□□□□ -1
CHD1-202ENST00000414220 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
CHD1-202ENST00000414220 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
CHD1-202ENST00000414220 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
CHD1-202ENST00000414220 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
CHD1-202ENST00000414220 PCP2Q8IVA1 136 aa8.76□□□□□ -1.01
CHD1-202ENST00000414220 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
CHD1-202ENST00000414220 B5MCH6 92 aa8.74□□□□□ -1.01
CHD1-202ENST00000414220 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
CHD1-202ENST00000414220 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
CHD1-202ENST00000414220 SMCR5Q8TEV8 140 aa8.74□□□□□ -1.01
CHD1-202ENST00000414220 KRTAP4-16G5E9R7 235 aaPredicted RBP8.73□□□□□ -1.01
CHD1-202ENST00000414220 A0A087X002 238 aa8.72□□□□□ -1.01
CHD1-202ENST00000414220 Q6ZRX8 168 aa8.72□□□□□ -1.01
CHD1-202ENST00000414220 ANAPC11Q9NYG5 84 aa8.72□□□□□ -1.01
CHD1-202ENST00000414220 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.02
CHD1-202ENST00000414220 SPRR4Q96PI1 79 aa8.71□□□□□ -1.02
CHD1-202ENST00000414220 TNXBP22105 4242 aa8.71□□□□□ -1.02
CHD1-202ENST00000414220 A6NDN8 102 aa8.69□□□□□ -1.02
CHD1-202ENST00000414220 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
CHD1-202ENST00000414220 GAGE2AQ6NT46 116 aa8.66□□□□□ -1.02
CHD1-202ENST00000414220 DHRS4-AS1Q9P1J3 65 aa8.66□□□□□ -1.02
CHD1-202ENST00000414220 COX8AP10176 69 aa8.65□□□□□ -1.02
CHD1-202ENST00000414220 KRTAP13-2Q52LG2 175 aa8.65□□□□□ -1.02
CHD1-202ENST00000414220 LINC00304Q8N9R0 145 aa8.65□□□□□ -1.02
CHD1-202ENST00000414220 VAMP8Q9BV40 100 aa8.65□□□□□ -1.02
CHD1-202ENST00000414220 DLEU1O43261 78 aa8.64□□□□□ -1.03
CHD1-202ENST00000414220 COX7BP24311 80 aa8.64□□□□□ -1.03
CHD1-202ENST00000414220 CTAG1AP78358 180 aa8.64□□□□□ -1.03
CHD1-202ENST00000414220 C6orf99Q4VX62 202 aa8.64□□□□□ -1.03
CHD1-202ENST00000414220 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
CHD1-202ENST00000414220 Q9BRP9 147 aa8.64□□□□□ -1.03
CHD1-202ENST00000414220 TRBV7-6A0A0J9YX20 115 aa8.63□□□□□ -1.03
CHD1-202ENST00000414220 TSPAN13O95857 204 aa8.63□□□□□ -1.03
CHD1-202ENST00000414220 SPATA45Q537H7 98 aa8.63□□□□□ -1.03
CHD1-202ENST00000414220 LINC00483Q53H64 154 aa8.63□□□□□ -1.03
CHD1-202ENST00000414220 SPAG11AQ6PDA7 123 aa8.63□□□□□ -1.03
CHD1-202ENST00000414220 HIST1H4GQ99525 98 aa8.63□□□□□ -1.03
CHD1-202ENST00000414220 PAM16Q9Y3D7 125 aa8.63□□□□□ -1.03
CHD1-202ENST00000414220 ERC2-IT1O76042 136 aa8.62□□□□□ -1.03
CHD1-202ENST00000414220 SLC25A34Q6PIV7 304 aa8.62□□□□□ -1.03
CHD1-202ENST00000414220 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
CHD1-202ENST00000414220 A4D1N5 150 aa8.61□□□□□ -1.03
CHD1-202ENST00000414220 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
CHD1-202ENST00000414220 VAMP3Q15836 100 aa8.61□□□□□ -1.03
CHD1-202ENST00000414220 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
CHD1-202ENST00000414220 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
CHD1-202ENST00000414220 C14orf144Q96I85 54 aa8.6□□□□□ -1.03
CHD1-202ENST00000414220 TMA7Q9Y2S6 64 aaKnown RBP8.6□□□□□ -1.03
CHD1-202ENST00000414220 PRR4Q16378 134 aa8.59□□□□□ -1.03
CHD1-202ENST00000414220 NHP2Q9NX24 153 aaKnown RBP8.59□□□□□ -1.03
CHD1-202ENST00000414220 SSBP3-AS1Q7Z2R9 100 aa8.58□□□□□ -1.04
CHD1-202ENST00000414220 IGLV9-49A0A0B4J1Y8 123 aa8.57□□□□□ -1.04
CHD1-202ENST00000414220 SLC25A20O43772 301 aa8.57□□□□□ -1.04
CHD1-202ENST00000414220 TAL2Q16559 108 aa8.57□□□□□ -1.04
CHD1-202ENST00000414220 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
CHD1-202ENST00000414220 C9orf153Q5TBE3 101 aa8.55□□□□□ -1.04
CHD1-202ENST00000414220 ST20-AS1Q8NBB2 130 aa8.55□□□□□ -1.04
CHD1-202ENST00000414220 Q8NBF4 154 aa8.55□□□□□ -1.04
CHD1-202ENST00000414220 SMIM11BQ8TCY0 68 aa8.55□□□□□ -1.04
CHD1-202ENST00000414220 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
CHD1-202ENST00000414220 MOBPQ13875 183 aa8.54□□□□□ -1.04
CHD1-202ENST00000414220 SPINK1P00995 79 aa8.53□□□□□ -1.04
CHD1-202ENST00000414220 RAB37Q96AX2 223 aa8.53□□□□□ -1.04
CHD1-202ENST00000414220 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
CHD1-202ENST00000414220 SPRR1BP22528 89 aa8.52□□□□□ -1.05
CHD1-202ENST00000414220 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
CHD1-202ENST00000414220 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
CHD1-202ENST00000414220 A6NJY4 79 aa8.51□□□□□ -1.05
CHD1-202ENST00000414220 PYY3Q5JQD4 70 aa8.51□□□□□ -1.05
CHD1-202ENST00000414220 BVES-AS1Q5T3Y7 98 aa8.51□□□□□ -1.05
CHD1-202ENST00000414220 C12orf57Q99622 126 aa8.51□□□□□ -1.05
CHD1-202ENST00000414220 SNCGO76070 127 aa8.5□□□□□ -1.05
CHD1-202ENST00000414220 CEND1Q8N111 149 aa8.48□□□□□ -1.05
CHD1-202ENST00000414220 A0A0B4J2C4 111 aa8.47□□□□□ -1.05
CHD1-202ENST00000414220 hADV29S1A0JD25 119 aa8.47□□□□□ -1.05
CHD1-202ENST00000414220 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
CHD1-202ENST00000414220 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
CHD1-202ENST00000414220 CFC1BP0CG36 223 aa8.46□□□□□ -1.06
CHD1-202ENST00000414220 CFC1P0CG37 223 aa8.46□□□□□ -1.06
CHD1-202ENST00000414220 LINC00575Q6W349 94 aa8.46□□□□□ -1.06
CHD1-202ENST00000414220 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.06
CHD1-202ENST00000414220 H7C2G1 150 aa8.45□□□□□ -1.06
CHD1-202ENST00000414220 Q1RN00 199 aa8.45□□□□□ -1.06
CHD1-202ENST00000414220 IGLV5-48A0A075B6I7 105 aa8.44□□□□□ -1.06
CHD1-202ENST00000414220 PRO1933Q9H354 126 aa8.44□□□□□ -1.06
CHD1-202ENST00000414220 UQCR10Q9UDW1 63 aa8.44□□□□□ -1.06
CHD1-202ENST00000414220 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
CHD1-202ENST00000414220 F8WEM9 126 aa8.43□□□□□ -1.06
CHD1-202ENST00000414220 H0YGX0 51 aa8.43□□□□□ -1.06
CHD1-202ENST00000414220 FP248Q71RG6 208 aaPredicted RBP8.43□□□□□ -1.06
CHD1-202ENST00000414220 HSD52Q0P140 79 aa8.42□□□□□ -1.06
CHD1-202ENST00000414220 PRO1854Q9UHT4 67 aa8.42□□□□□ -1.06
CHD1-202ENST00000414220 LIMD2Q9BT23 127 aa8.41□□□□□ -1.06
CHD1-202ENST00000414220 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.4□□□□□ -1.06
CHD1-202ENST00000414220 Q6ZQY7 126 aa8.4□□□□□ -1.06
CHD1-202ENST00000414220 GHRHP01286 108 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms