RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SSBP3-AS1Q7Z2R9 100 aa3.79□□□□□ -1.8
USP54-202ENST00000413442 PMCHL2Q9BQD1 86 aa3.79□□□□□ -1.8
USP54-202ENST00000413442 TRBV7-6A0A0J9YX20 115 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 TRBV10-3A0A0K0K1G6 114 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 HSBP1L1C9JCN9 74 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 Q8NDZ9 215 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 LINC00308Q8TCZ7 52 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 SPANXDQ9BXN6 97 aa3.78□□□□□ -1.8
USP54-202ENST00000413442 A4D1N5 150 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 B5MCH6 92 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 PRLHP81277 87 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 ADAMTSL4-AS1Q5T5F5 129 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 SCGB1D4Q6XE38 83 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 Q6ZRX8 168 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 SPRR4Q96PI1 79 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 HIGD2AQ9BW72 106 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 DHRS4-AS1Q9P1J3 65 aa3.77□□□□□ -1.81
USP54-202ENST00000413442 TRAV23DV6A0A075B6W5 121 aa3.76□□□□□ -1.81
USP54-202ENST00000413442 A0A087X002 238 aa3.76□□□□□ -1.81
USP54-202ENST00000413442 NCR3O14931 201 aa3.76□□□□□ -1.81
USP54-202ENST00000413442 ZNF73O43830 326 aaPredicted RBP3.76□□□□□ -1.81
USP54-202ENST00000413442 SPINK1P00995 79 aa3.76□□□□□ -1.81
USP54-202ENST00000413442 RPS29P62273 56 aaKnown RBP3.76□□□□□ -1.81
USP54-202ENST00000413442 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
USP54-202ENST00000413442 LINC00304Q8N9R0 145 aa3.76□□□□□ -1.81
USP54-202ENST00000413442 LITAFQ99732 161 aa3.76□□□□□ -1.81
USP54-202ENST00000413442 TRAV13-2A0A0B4J235 113 aa3.75□□□□□ -1.81
USP54-202ENST00000413442 HIST3H2BBQ8N257 126 aa3.75□□□□□ -1.81
USP54-202ENST00000413442 DAND5Q8N907 189 aa3.75□□□□□ -1.81
USP54-202ENST00000413442 TNXBP22105 4242 aa3.75□□□□□ -1.81
USP54-202ENST00000413442 KRTAP13-2Q52LG2 175 aa3.74□□□□□ -1.81
USP54-202ENST00000413442 SOSTDC1Q6X4U4 206 aa3.74□□□□□ -1.81
USP54-202ENST00000413442 OR13C6PQ8NH95 151 aa3.74□□□□□ -1.81
USP54-202ENST00000413442 HIST1H2BLQ99880 126 aa3.74□□□□□ -1.81
USP54-202ENST00000413442 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
USP54-202ENST00000413442 DLEU1O43261 78 aa3.73□□□□□ -1.81
USP54-202ENST00000413442 SPRR1BP22528 89 aa3.73□□□□□ -1.81
USP54-202ENST00000413442 VAMP3Q15836 100 aa3.73□□□□□ -1.81
USP54-202ENST00000413442 FP248Q71RG6 208 aaPredicted RBP3.73□□□□□ -1.81
USP54-202ENST00000413442 A0A1B0GWB2 263 aa3.72□□□□□ -1.81
USP54-202ENST00000413442 PRR4Q16378 134 aa3.72□□□□□ -1.81
USP54-202ENST00000413442 ANKRD39Q53RE8 183 aa3.72□□□□□ -1.81
USP54-202ENST00000413442 HMCN2Q8NDA2 5059 aa3.72□□□□□ -1.81
USP54-202ENST00000413442 COX7BP24311 80 aa3.71□□□□□ -1.82
USP54-202ENST00000413442 ELOF1P60002 83 aaKnown RBP3.71□□□□□ -1.82
USP54-202ENST00000413442 NPC2P61916 151 aa3.71□□□□□ -1.82
USP54-202ENST00000413442 GAGE2AQ6NT46 116 aa3.71□□□□□ -1.82
USP54-202ENST00000413442 MUSTN1Q8IVN3 82 aa3.71□□□□□ -1.82
USP54-202ENST00000413442 Q9BRP9 147 aa3.71□□□□□ -1.82
USP54-202ENST00000413442 ANAPC11Q9NYG5 84 aa3.71□□□□□ -1.82
USP54-202ENST00000413442 TEX49A0A1B0GTD5 131 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 A6NDN8 102 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 SLC25A20O43772 301 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 EIF4EBP3O60516 100 aaPredicted RBP3.7□□□□□ -1.82
USP54-202ENST00000413442 SNCGO76070 127 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 TSPAN13O95857 204 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 SCGB1D1O95968 90 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 GHRHP01286 108 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 CD164Q04900 197 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 TAL2Q16559 108 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 TPRXLQ17RH7 258 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 PCP2Q8IVA1 136 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 LAMTOR3Q9UHA4 124 aa3.7□□□□□ -1.82
USP54-202ENST00000413442 ATOH7Q8N100 152 aa3.69□□□□□ -1.82
USP54-202ENST00000413442 TTTY13Q9BZ97 58 aa3.69□□□□□ -1.82
USP54-202ENST00000413442 ERC2-IT1O76042 136 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 COX8AP10176 69 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 BVES-AS1Q5T3Y7 98 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 C3orf22Q8N5N4 141 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 Q8NBF4 154 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 PPDPFLQ8WWR9 84 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 LIMD2Q9BT23 127 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 HIGD1BQ9P298 99 aa3.68□□□□□ -1.82
USP54-202ENST00000413442 IGLV5-48A0A075B6I7 105 aa3.67□□□□□ -1.82
USP54-202ENST00000413442 IGLV7-46A0A075B6I9 117 aa3.67□□□□□ -1.82
USP54-202ENST00000413442 HIST1H4GQ99525 98 aa3.67□□□□□ -1.82
USP54-202ENST00000413442 PRO1933Q9H354 126 aa3.67□□□□□ -1.82
USP54-202ENST00000413442 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
USP54-202ENST00000413442 A0A0U1RQV1 116 aa3.66□□□□□ -1.82
USP54-202ENST00000413442 H0YGX0 51 aa3.66□□□□□ -1.82
USP54-202ENST00000413442 MOBPQ13875 183 aa3.66□□□□□ -1.82
USP54-202ENST00000413442 OCIAD2Q56VL3 154 aa3.66□□□□□ -1.82
USP54-202ENST00000413442 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
USP54-202ENST00000413442 Q5XG85 94 aa3.66□□□□□ -1.82
USP54-202ENST00000413442 TMEM238LA0A1B0GVL6 79 aa3.65□□□□□ -1.83
USP54-202ENST00000413442 A6NJY4 79 aa3.65□□□□□ -1.83
USP54-202ENST00000413442 C9orf153Q5TBE3 101 aa3.65□□□□□ -1.83
USP54-202ENST00000413442 SMIM11BQ8TCY0 68 aa3.65□□□□□ -1.83
USP54-202ENST00000413442 VAMP8Q9BV40 100 aa3.65□□□□□ -1.83
USP54-202ENST00000413442 CDIP1Q9H305 208 aa3.65□□□□□ -1.83
USP54-202ENST00000413442 A0A1B0GX51 115 aa3.64□□□□□ -1.83
USP54-202ENST00000413442 hADV29S1A0JD25 119 aa3.64□□□□□ -1.83
USP54-202ENST00000413442 H3BQ85 93 aa3.64□□□□□ -1.83
USP54-202ENST00000413442 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms