RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 A0A0J9YXY3 114 aa8.17□□□□□ -1.1
MCF2L-210ENST00000409954 E9PLD3 99 aa8.17□□□□□ -1.1
MCF2L-210ENST00000409954 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
MCF2L-210ENST00000409954 ZNF73O43830 326 aaPredicted RBP8.16□□□□□ -1.1
MCF2L-210ENST00000409954 ADAMTSL4-AS1Q5T5F5 129 aa8.16□□□□□ -1.1
MCF2L-210ENST00000409954 Q8N377 158 aa8.16□□□□□ -1.1
MCF2L-210ENST00000409954 SEC61BP60468 96 aaKnown RBP8.15□□□□□ -1.1
MCF2L-210ENST00000409954 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
MCF2L-210ENST00000409954 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
MCF2L-210ENST00000409954 FAT4Q6V0I7 4981 aa8.13□□□□□ -1.11
MCF2L-210ENST00000409954 SYS1-DBNDD2H3BUS1 97 aa8.12□□□□□ -1.11
MCF2L-210ENST00000409954 EIF4EBP3O60516 100 aaPredicted RBP8.12□□□□□ -1.11
MCF2L-210ENST00000409954 TIMM17BO60830 172 aa8.12□□□□□ -1.11
MCF2L-210ENST00000409954 NPC2P61916 151 aa8.12□□□□□ -1.11
MCF2L-210ENST00000409954 SLC25A34Q6PIV7 304 aa8.12□□□□□ -1.11
MCF2L-210ENST00000409954 SPANXCQ9NY87 97 aa8.12□□□□□ -1.11
MCF2L-210ENST00000409954 C9orf153Q5TBE3 101 aa8.11□□□□□ -1.11
MCF2L-210ENST00000409954 SLC7A5P1Q8MH63 180 aa8.11□□□□□ -1.11
MCF2L-210ENST00000409954 OR13C6PQ8NH95 151 aa8.11□□□□□ -1.11
MCF2L-210ENST00000409954 LINC00308Q8TCZ7 52 aa8.11□□□□□ -1.11
MCF2L-210ENST00000409954 LINC00518Q8N0U6 118 aa8.1□□□□□ -1.11
MCF2L-210ENST00000409954 DHRS4-AS1Q9P1J3 65 aa8.1□□□□□ -1.11
MCF2L-210ENST00000409954 SPRR1BP22528 89 aa8.09□□□□□ -1.11
MCF2L-210ENST00000409954 PET117Q6UWS5 81 aa8.09□□□□□ -1.11
MCF2L-210ENST00000409954 ST20-AS1Q8NBB2 130 aa8.09□□□□□ -1.11
MCF2L-210ENST00000409954 LINC01545Q5VT33 79 aa8.08□□□□□ -1.12
MCF2L-210ENST00000409954 LITAFQ99732 161 aa8.08□□□□□ -1.12
MCF2L-210ENST00000409954 SPANXDQ9BXN6 97 aa8.08□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BKO60814 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BJP06899 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BOP23527 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BBP33778 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BDP58876 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BCP62807 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST2H2BEQ16778 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-210ENST00000409954 XP32Q5T750 250 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BHQ93079 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BNQ99877 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 HIST1H2BMQ99879 126 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 LAMTOR3Q9UHA4 124 aa8.06□□□□□ -1.12
MCF2L-210ENST00000409954 ZNF815PA8K554 130 aa8.05□□□□□ -1.12
MCF2L-210ENST00000409954 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
MCF2L-210ENST00000409954 COX7BP24311 80 aa8.03□□□□□ -1.12
MCF2L-210ENST00000409954 TAL2Q16559 108 aa8.03□□□□□ -1.12
MCF2L-210ENST00000409954 COPS9Q8WXC6 57 aa8.03□□□□□ -1.12
MCF2L-210ENST00000409954 ELOF1P60002 83 aaKnown RBP8.02□□□□□ -1.13
MCF2L-210ENST00000409954 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
MCF2L-210ENST00000409954 C6orf99Q4VX62 202 aa8.01□□□□□ -1.13
MCF2L-210ENST00000409954 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
MCF2L-210ENST00000409954 TEX49A0A1B0GTD5 131 aa8□□□□□ -1.13
MCF2L-210ENST00000409954 C3orf79P0CE67 100 aa8□□□□□ -1.13
MCF2L-210ENST00000409954 CD164Q04900 197 aa8□□□□□ -1.13
MCF2L-210ENST00000409954 IFITM1P13164 125 aa7.99□□□□□ -1.13
MCF2L-210ENST00000409954 SCGB1D4Q6XE38 83 aa7.99□□□□□ -1.13
MCF2L-210ENST00000409954 Q6ZVH6 145 aa7.99□□□□□ -1.13
MCF2L-210ENST00000409954 PRO1933Q9H354 126 aa7.99□□□□□ -1.13
MCF2L-210ENST00000409954 HRCT1Q6UXD1 115 aa7.98□□□□□ -1.13
MCF2L-210ENST00000409954 DEFB105AQ8NG35 78 aa7.98□□□□□ -1.13
MCF2L-210ENST00000409954 TTTY13Q9BZ97 58 aa7.98□□□□□ -1.13
MCF2L-210ENST00000409954 AKR1D1P51857 326 aa7.97□□□□□ -1.13
MCF2L-210ENST00000409954 COA6Q5JTJ3 125 aaKnown RBP7.97□□□□□ -1.13
MCF2L-210ENST00000409954 A0A1B0GWB2 263 aa7.96□□□□□ -1.14
MCF2L-210ENST00000409954 C20orf202A1L168 122 aa7.96□□□□□ -1.14
MCF2L-210ENST00000409954 KRTDAPP60985 99 aa7.96□□□□□ -1.14
MCF2L-210ENST00000409954 A4D1N5 150 aa7.95□□□□□ -1.14
MCF2L-210ENST00000409954 H7C2G1 150 aa7.95□□□□□ -1.14
MCF2L-210ENST00000409954 Q5XG85 94 aa7.95□□□□□ -1.14
MCF2L-210ENST00000409954 A6NDN8 102 aa7.94□□□□□ -1.14
MCF2L-210ENST00000409954 Q1RN00 199 aa7.94□□□□□ -1.14
MCF2L-210ENST00000409954 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
MCF2L-210ENST00000409954 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
MCF2L-210ENST00000409954 MUSTN1Q8IVN3 82 aa7.92□□□□□ -1.14
MCF2L-210ENST00000409954 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
MCF2L-210ENST00000409954 TRAV13-2A0A0B4J235 113 aa7.91□□□□□ -1.14
MCF2L-210ENST00000409954 SNRPEP62304 92 aaKnown RBP7.91□□□□□ -1.14
MCF2L-210ENST00000409954 NHP2Q9NX24 153 aaKnown RBP7.91□□□□□ -1.14
MCF2L-210ENST00000409954 C9orf92A6NGG3 77 aa7.9□□□□□ -1.14
MCF2L-210ENST00000409954 ANKRD39Q53RE8 183 aa7.9□□□□□ -1.14
MCF2L-210ENST00000409954 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
MCF2L-210ENST00000409954 IGLV8-61A0A075B6I0 122 aa7.88□□□□□ -1.15
MCF2L-210ENST00000409954 VAMP3Q15836 100 aa7.88□□□□□ -1.15
MCF2L-210ENST00000409954 LCE2DQ5TA82 110 aaPredicted RBP7.87□□□□□ -1.15
MCF2L-210ENST00000409954 C1orf195Q5TG92 126 aa7.87□□□□□ -1.15
MCF2L-210ENST00000409954 PCP2Q8IVA1 136 aa7.87□□□□□ -1.15
MCF2L-210ENST00000409954 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
MCF2L-210ENST00000409954 ATOH7Q8N100 152 aa7.86□□□□□ -1.15
MCF2L-210ENST00000409954 SMIM11BQ8TCY0 68 aa7.86□□□□□ -1.15
MCF2L-210ENST00000409954 TCL1BO95988 128 aa7.85□□□□□ -1.15
MCF2L-210ENST00000409954 F8WEM9 126 aa7.81□□□□□ -1.16
MCF2L-210ENST00000409954 KRTAP19-2Q3LHN2 52 aa7.81□□□□□ -1.16
MCF2L-210ENST00000409954 A0A0G2JQZ4 141 aa7.8□□□□□ -1.16
MCF2L-210ENST00000409954 CFC1BP0CG36 223 aa7.8□□□□□ -1.16
MCF2L-210ENST00000409954 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
MCF2L-210ENST00000409954 HSBP1L1C9JCN9 74 aa7.79□□□□□ -1.16
MCF2L-210ENST00000409954 Q6JHZ5 121 aa7.79□□□□□ -1.16
MCF2L-210ENST00000409954 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
MCF2L-210ENST00000409954 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
MCF2L-210ENST00000409954 S100A2P29034 98 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms