RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 Q6ZRN7 208 aaPredicted RBP3.61□□□□□ -1.83
EPHA4-202ENST00000409854 TLX1NBP0CAT3 122 aa3.61□□□□□ -1.83
EPHA4-202ENST00000409854 SYCNQ0VAF6 134 aa3.61□□□□□ -1.83
EPHA4-202ENST00000409854 SLPIP03973 132 aa3.6□□□□□ -1.83
EPHA4-202ENST00000409854 DNAH6Q9C0G6 4158 aa3.6□□□□□ -1.83
EPHA4-202ENST00000409854 TRAV13-2A0A0B4J235 113 aa3.6□□□□□ -1.83
EPHA4-202ENST00000409854 Q6ZR54 194 aa3.6□□□□□ -1.83
EPHA4-202ENST00000409854 LINC00337Q8N6G1 96 aa3.6□□□□□ -1.83
EPHA4-202ENST00000409854 Q8NDZ9 215 aa3.6□□□□□ -1.83
EPHA4-202ENST00000409854 TENM2Q9NT68 2774 aa3.59□□□□□ -1.83
EPHA4-202ENST00000409854 LRCOL1A6NCL2 159 aa3.59□□□□□ -1.83
EPHA4-202ENST00000409854 TRIAP1O43715 76 aa3.59□□□□□ -1.83
EPHA4-202ENST00000409854 CNBPP62633 177 aaKnown RBP3.59□□□□□ -1.83
EPHA4-202ENST00000409854 DNAH10Q8IVF4 4471 aa3.59□□□□□ -1.84
EPHA4-202ENST00000409854 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 ALMS1Q8TCU4 4167 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 C14orf177Q52M58 125 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 SERTAD4-AS1Q5TG53 156 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 Q6ZRP5 223 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 LECT2O14960 151 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 PSCAO43653 123 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 NDUFS5O43920 106 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 RPL28P46779 137 aaKnown RBP3.58□□□□□ -1.84
EPHA4-202ENST00000409854 LINC00476Q8WZB0 136 aa3.58□□□□□ -1.84
EPHA4-202ENST00000409854 COX6CP09669 75 aa3.57□□□□□ -1.84
EPHA4-202ENST00000409854 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
EPHA4-202ENST00000409854 PLA2G2DQ9UNK4 145 aa3.57□□□□□ -1.84
EPHA4-202ENST00000409854 TEX49A0A1B0GTD5 131 aa3.57□□□□□ -1.84
EPHA4-202ENST00000409854 INAFM2P0DMQ5 153 aa3.57□□□□□ -1.84
EPHA4-202ENST00000409854 ATP5EP2Q5VTU8 51 aa3.57□□□□□ -1.84
EPHA4-202ENST00000409854 Q6JHZ5 121 aa3.57□□□□□ -1.84
EPHA4-202ENST00000409854 FP248Q71RG6 208 aaPredicted RBP3.57□□□□□ -1.84
EPHA4-202ENST00000409854 XAGE1AQ9HD64 81 aa3.57□□□□□ -1.84
EPHA4-202ENST00000409854 PRR3P79522 188 aaKnown RBP3.56□□□□□ -1.84
EPHA4-202ENST00000409854 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
EPHA4-202ENST00000409854 NCR3O14931 201 aa3.56□□□□□ -1.84
EPHA4-202ENST00000409854 IGLV6-57P01721 117 aa3.56□□□□□ -1.84
EPHA4-202ENST00000409854 SMIM11BQ8TCY0 68 aa3.56□□□□□ -1.84
EPHA4-202ENST00000409854 IGLV5-37A0A075B6J1 123 aa3.56□□□□□ -1.84
EPHA4-202ENST00000409854 M0R2N4 97 aa3.56□□□□□ -1.84
EPHA4-202ENST00000409854 KLKP1Q107X0 134 aa3.55□□□□□ -1.84
EPHA4-202ENST00000409854 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
EPHA4-202ENST00000409854 LST1O00453 97 aa3.55□□□□□ -1.84
EPHA4-202ENST00000409854 LY6G6CO95867 125 aa3.55□□□□□ -1.84
EPHA4-202ENST00000409854 Q8N814 137 aa3.55□□□□□ -1.84
EPHA4-202ENST00000409854 KMT2AQ03164 3969 aa3.55□□□□□ -1.84
EPHA4-202ENST00000409854 S100A7L2Q5SY68 101 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 A0A087WTM6 91 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 M0R378 163 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 C9orf163Q8N9P6 203 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 TGP01266 2768 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 C16orf90A8MZG2 172 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 H3BS24 57 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 KRTAP7-1Q8IUC3 87 aa3.54□□□□□ -1.84
EPHA4-202ENST00000409854 H0YGX0 51 aa3.53□□□□□ -1.84
EPHA4-202ENST00000409854 C1orf134Q5TEV5 83 aa3.53□□□□□ -1.84
EPHA4-202ENST00000409854 RBM12B-AS1Q9P1G2 102 aa3.53□□□□□ -1.84
EPHA4-202ENST00000409854 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.53□□□□□ -1.84
EPHA4-202ENST00000409854 A0A096LNI7 61 aa3.53□□□□□ -1.84
EPHA4-202ENST00000409854 CCKP06307 115 aa3.53□□□□□ -1.84
EPHA4-202ENST00000409854 FAM218AQ96MZ4 157 aa3.53□□□□□ -1.84
EPHA4-202ENST00000409854 FRAS1Q86XX4 4008 aa3.53□□□□□ -1.84
EPHA4-202ENST00000409854 DNAH2Q9P225 4427 aa3.53□□□□□ -1.85
EPHA4-202ENST00000409854 TRAV23DV6A0A075B6W5 121 aa3.52□□□□□ -1.85
EPHA4-202ENST00000409854 FAM168BA1KXE4 195 aa3.52□□□□□ -1.85
EPHA4-202ENST00000409854 H7BZZ5 65 aa3.52□□□□□ -1.85
EPHA4-202ENST00000409854 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
EPHA4-202ENST00000409854 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 NKAPP1Q8N9T2 125 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 C7orf33Q8WU49 177 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
EPHA4-202ENST00000409854 LINC00167Q96N53 147 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 KCNQ1DNQ9H478 68 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 TRAV7A0A075B6U4 112 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 A0A087WYN8 130 aa3.51□□□□□ -1.85
EPHA4-202ENST00000409854 IGLV1-50A0A075B6I6 118 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 RTL8CO15255 209 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
EPHA4-202ENST00000409854 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 SMCR5Q8TEV8 140 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 HECTD4Q9Y4D8 3996 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 PRYO14603 147 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 SPRR1AP35321 89 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 ELOF1P60002 83 aaKnown RBP3.5□□□□□ -1.85
EPHA4-202ENST00000409854 UBE2BP63146 152 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 Q1T7F1 81 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 LINC00575Q6W349 94 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 Q6ZVQ6 151 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
EPHA4-202ENST00000409854 A0A1W2PNN7 141 aa3.49□□□□□ -1.85
EPHA4-202ENST00000409854 IGKV2-24A0A0C4DH68 120 aa3.49□□□□□ -1.85
EPHA4-202ENST00000409854 KRTAP4-16G5E9R7 235 aaPredicted RBP3.49□□□□□ -1.85
EPHA4-202ENST00000409854 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
EPHA4-202ENST00000409854 TNP2Q05952 138 aa3.49□□□□□ -1.85
EPHA4-202ENST00000409854 SPACA4Q8TDM5 124 aa3.49□□□□□ -1.85
EPHA4-202ENST00000409854 LCE6AA0A183 80 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms