RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 E9PLD3 99 aa8.44□□□□□ -1.06
NIF3L1-205ENST00000409588 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
NIF3L1-205ENST00000409588 DDTP30046 118 aa8.43□□□□□ -1.06
NIF3L1-205ENST00000409588 SMCR5Q8TEV8 140 aa8.43□□□□□ -1.06
NIF3L1-205ENST00000409588 SYS1-DBNDD2H3BUS1 97 aa8.42□□□□□ -1.06
NIF3L1-205ENST00000409588 PMCHL2Q9BQD1 86 aa8.42□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BKO60814 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BJP06899 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BOP23527 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BBP33778 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BDP58876 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BCP62807 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 JOSD1Q15040 202 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST2H2BEQ16778 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 DAND5Q8N907 189 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BHQ93079 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BNQ99877 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 HIST1H2BMQ99879 126 aa8.41□□□□□ -1.06
NIF3L1-205ENST00000409588 B5MCH6 92 aa8.4□□□□□ -1.06
NIF3L1-205ENST00000409588 PET117Q6UWS5 81 aa8.4□□□□□ -1.06
NIF3L1-205ENST00000409588 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
NIF3L1-205ENST00000409588 IGLV6-57P01721 117 aa8.39□□□□□ -1.07
NIF3L1-205ENST00000409588 LINC00483Q53H64 154 aa8.39□□□□□ -1.07
NIF3L1-205ENST00000409588 KRTAP5-3Q6L8H2 238 aa8.39□□□□□ -1.07
NIF3L1-205ENST00000409588 C3orf22Q8N5N4 141 aa8.39□□□□□ -1.07
NIF3L1-205ENST00000409588 C5orf52A6NGY3 159 aa8.38□□□□□ -1.07
NIF3L1-205ENST00000409588 TIMM17BO60830 172 aa8.38□□□□□ -1.07
NIF3L1-205ENST00000409588 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
NIF3L1-205ENST00000409588 TPRXLQ17RH7 258 aa8.38□□□□□ -1.07
NIF3L1-205ENST00000409588 LINC01545Q5VT33 79 aa8.38□□□□□ -1.07
NIF3L1-205ENST00000409588 SPINK1P00995 79 aa8.37□□□□□ -1.07
NIF3L1-205ENST00000409588 Q6ZRX8 168 aa8.37□□□□□ -1.07
NIF3L1-205ENST00000409588 SSBP3-AS1Q7Z2R9 100 aa8.37□□□□□ -1.07
NIF3L1-205ENST00000409588 IGLV7-46A0A075B6I9 117 aa8.36□□□□□ -1.07
NIF3L1-205ENST00000409588 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
NIF3L1-205ENST00000409588 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-205ENST00000409588 TRAV23DV6A0A075B6W5 121 aa8.35□□□□□ -1.07
NIF3L1-205ENST00000409588 AKR1D1P51857 326 aa8.35□□□□□ -1.07
NIF3L1-205ENST00000409588 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-205ENST00000409588 ADAMTSL4-AS1Q5T5F5 129 aa8.35□□□□□ -1.07
NIF3L1-205ENST00000409588 SPANXCQ9NY87 97 aa8.35□□□□□ -1.07
NIF3L1-205ENST00000409588 ZNF73O43830 326 aaPredicted RBP8.34□□□□□ -1.07
NIF3L1-205ENST00000409588 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
NIF3L1-205ENST00000409588 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
NIF3L1-205ENST00000409588 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-205ENST00000409588 LINC00518Q8N0U6 118 aa8.33□□□□□ -1.08
NIF3L1-205ENST00000409588 Q8NBF4 154 aa8.33□□□□□ -1.08
NIF3L1-205ENST00000409588 RETNLBQ9BQ08 111 aa8.33□□□□□ -1.08
NIF3L1-205ENST00000409588 SOSTDC1Q6X4U4 206 aa8.32□□□□□ -1.08
NIF3L1-205ENST00000409588 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
NIF3L1-205ENST00000409588 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
NIF3L1-205ENST00000409588 Q9BRP9 147 aa8.32□□□□□ -1.08
NIF3L1-205ENST00000409588 PPDPFQ9H3Y8 114 aa8.32□□□□□ -1.08
NIF3L1-205ENST00000409588 MUC2Q02817 5179 aa8.31□□□□□ -1.08
NIF3L1-205ENST00000409588 C20orf202A1L168 122 aa8.3□□□□□ -1.08
NIF3L1-205ENST00000409588 ZNF815PA8K554 130 aa8.3□□□□□ -1.08
NIF3L1-205ENST00000409588 ERC2-IT1O76042 136 aa8.3□□□□□ -1.08
NIF3L1-205ENST00000409588 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
NIF3L1-205ENST00000409588 LITAFQ99732 161 aa8.3□□□□□ -1.08
NIF3L1-205ENST00000409588 SPANXDQ9BXN6 97 aa8.3□□□□□ -1.08
NIF3L1-205ENST00000409588 NPC2P61916 151 aa8.29□□□□□ -1.08
NIF3L1-205ENST00000409588 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
NIF3L1-205ENST00000409588 Q6ZVH6 145 aa8.28□□□□□ -1.08
NIF3L1-205ENST00000409588 OR13C6PQ8NH95 151 aa8.28□□□□□ -1.08
NIF3L1-205ENST00000409588 DHRS4-AS1Q9P1J3 65 aa8.28□□□□□ -1.08
NIF3L1-205ENST00000409588 IGLV9-49A0A0B4J1Y8 123 aa8.26□□□□□ -1.09
NIF3L1-205ENST00000409588 IFITM1P13164 125 aa8.26□□□□□ -1.09
NIF3L1-205ENST00000409588 KRTDAPP60985 99 aa8.26□□□□□ -1.09
NIF3L1-205ENST00000409588 SNRPEP62304 92 aaKnown RBP8.26□□□□□ -1.09
NIF3L1-205ENST00000409588 MOBPQ13875 183 aa8.26□□□□□ -1.09
NIF3L1-205ENST00000409588 SLC25A20O43772 301 aa8.25□□□□□ -1.09
NIF3L1-205ENST00000409588 SCGB1D4Q6XE38 83 aa8.25□□□□□ -1.09
NIF3L1-205ENST00000409588 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
NIF3L1-205ENST00000409588 SPRR1BP22528 89 aa8.23□□□□□ -1.09
NIF3L1-205ENST00000409588 Q8N377 158 aa8.21□□□□□ -1.1
NIF3L1-205ENST00000409588 COX7BP24311 80 aa8.2□□□□□ -1.1
NIF3L1-205ENST00000409588 ELOF1P60002 83 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-205ENST00000409588 KRTAP13-3Q3SY46 172 aa8.2□□□□□ -1.1
NIF3L1-205ENST00000409588 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
NIF3L1-205ENST00000409588 TTTY13Q9BZ97 58 aa8.2□□□□□ -1.1
NIF3L1-205ENST00000409588 LAMTOR3Q9UHA4 124 aa8.2□□□□□ -1.1
NIF3L1-205ENST00000409588 ST20-AS1Q8NBB2 130 aa8.19□□□□□ -1.1
NIF3L1-205ENST00000409588 A4D1N5 150 aa8.18□□□□□ -1.1
NIF3L1-205ENST00000409588 C6orf99Q4VX62 202 aa8.18□□□□□ -1.1
NIF3L1-205ENST00000409588 A0A1B0GWB2 263 aa8.17□□□□□ -1.1
NIF3L1-205ENST00000409588 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
NIF3L1-205ENST00000409588 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
NIF3L1-205ENST00000409588 TEX49A0A1B0GTD5 131 aa8.16□□□□□ -1.1
NIF3L1-205ENST00000409588 TAL2Q16559 108 aa8.16□□□□□ -1.1
NIF3L1-205ENST00000409588 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
NIF3L1-205ENST00000409588 A6NDN8 102 aa8.15□□□□□ -1.1
NIF3L1-205ENST00000409588 MUSTN1Q8IVN3 82 aa8.15□□□□□ -1.1
NIF3L1-205ENST00000409588 S100A1P23297 94 aa8.14□□□□□ -1.11
NIF3L1-205ENST00000409588 S100A2P29034 98 aa8.14□□□□□ -1.11
NIF3L1-205ENST00000409588 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
NIF3L1-205ENST00000409588 CD164Q04900 197 aa8.14□□□□□ -1.11
NIF3L1-205ENST00000409588 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
NIF3L1-205ENST00000409588 NHP2Q9NX24 153 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms