RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
COL6A2-204ENST00000409416 COX17Q14061 63 aa9.01□□□□□ -0.97
COL6A2-204ENST00000409416 LINC00474Q9P2X8 69 aa9.01□□□□□ -0.97
COL6A2-204ENST00000409416 CASC10Q5T4H9 136 aa9□□□□□ -0.97
COL6A2-204ENST00000409416 Q8N9L7 120 aa8.99□□□□□ -0.97
COL6A2-204ENST00000409416 LINC00575Q6W349 94 aa8.99□□□□□ -0.97
COL6A2-204ENST00000409416 A0A0G2JQZ4 141 aa8.98□□□□□ -0.97
COL6A2-204ENST00000409416 A0A1W2PNN7 141 aa8.98□□□□□ -0.97
COL6A2-204ENST00000409416 NDUFC2O95298 119 aa8.98□□□□□ -0.97
COL6A2-204ENST00000409416 UBE2BP63146 152 aa8.98□□□□□ -0.97
COL6A2-204ENST00000409416 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
COL6A2-204ENST00000409416 DIRC1Q969H9 104 aa8.98□□□□□ -0.97
COL6A2-204ENST00000409416 OBSCN-AS1Q96MR7 158 aa8.98□□□□□ -0.97
COL6A2-204ENST00000409416 SRRM2Q9UQ35 2752 aaKnown RBP8.97□□□□□ -0.97
COL6A2-204ENST00000409416 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
COL6A2-204ENST00000409416 RMI2Q96E14 147 aa8.96□□□□□ -0.98
COL6A2-204ENST00000409416 LRCOL1A6NCL2 159 aa8.96□□□□□ -0.98
COL6A2-204ENST00000409416 F8WEM9 126 aa8.95□□□□□ -0.98
COL6A2-204ENST00000409416 SYCNQ0VAF6 134 aa8.95□□□□□ -0.98
COL6A2-204ENST00000409416 HIGD2AQ9BW72 106 aa8.95□□□□□ -0.98
COL6A2-204ENST00000409416 COX7BP24311 80 aa8.94□□□□□ -0.98
COL6A2-204ENST00000409416 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
COL6A2-204ENST00000409416 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
COL6A2-204ENST00000409416 ZNF73O43830 326 aaPredicted RBP8.93□□□□□ -0.98
COL6A2-204ENST00000409416 SMIM26A0A096LP01 95 aa8.93□□□□□ -0.98
COL6A2-204ENST00000409416 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
COL6A2-204ENST00000409416 NDUFC2-KCTD14E9PQ53 114 aa8.9□□□□□ -0.98
COL6A2-204ENST00000409416 ETDCA0A1B0GVM5 59 aa8.9□□□□□ -0.98
COL6A2-204ENST00000409416 Q6ZQT0 140 aa8.9□□□□□ -0.99
COL6A2-204ENST00000409416 Q6ZRP5 223 aa8.89□□□□□ -0.99
COL6A2-204ENST00000409416 LINC00167Q96N53 147 aa8.89□□□□□ -0.99
COL6A2-204ENST00000409416 Q6ZVQ6 151 aa8.88□□□□□ -0.99
COL6A2-204ENST00000409416 TRBV7-6A0A0J9YX20 115 aa8.88□□□□□ -0.99
COL6A2-204ENST00000409416 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
COL6A2-204ENST00000409416 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
COL6A2-204ENST00000409416 CHTF8P0CG12 524 aa8.86□□□□□ -0.99
COL6A2-204ENST00000409416 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
COL6A2-204ENST00000409416 ATP5EP2Q5VTU8 51 aa8.86□□□□□ -0.99
COL6A2-204ENST00000409416 PRR34Q9NV39 138 aa8.86□□□□□ -0.99
COL6A2-204ENST00000409416 MUC7Q8TAX7 377 aa8.86□□□□□ -0.99
COL6A2-204ENST00000409416 PRLHP81277 87 aa8.85□□□□□ -0.99
COL6A2-204ENST00000409416 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
COL6A2-204ENST00000409416 LINC00588Q9Y4M8 146 aa8.85□□□□□ -0.99
COL6A2-204ENST00000409416 TRAV10A0A0B4J240 114 aa8.84□□□□□ -0.99
COL6A2-204ENST00000409416 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
COL6A2-204ENST00000409416 C15orf56Q8N910 161 aa8.82□□□□□ -1
COL6A2-204ENST00000409416 M0R378 163 aa8.81□□□□□ -1
COL6A2-204ENST00000409416 H7BZZ5 65 aa8.81□□□□□ -1
COL6A2-204ENST00000409416 VPREB1P12018 145 aa8.81□□□□□ -1
COL6A2-204ENST00000409416 C7orf33Q8WU49 177 aa8.81□□□□□ -1
COL6A2-204ENST00000409416 K7EIL1 84 aa8.8□□□□□ -1
COL6A2-204ENST00000409416 NREPQ16612 68 aa8.8□□□□□ -1
COL6A2-204ENST00000409416 EGFEM1PQ0D2K5 195 aa8.8□□□□□ -1
COL6A2-204ENST00000409416 PMAIP1Q13794 54 aa8.8□□□□□ -1
COL6A2-204ENST00000409416 PRR4Q16378 134 aa8.8□□□□□ -1
COL6A2-204ENST00000409416 LOC110117498A0A087WWA1 95 aa8.79□□□□□ -1
COL6A2-204ENST00000409416 ELOF1P60002 83 aaKnown RBP8.79□□□□□ -1
COL6A2-204ENST00000409416 BPY2O14599 106 aa8.78□□□□□ -1
COL6A2-204ENST00000409416 PSPHP1O15172 72 aa8.78□□□□□ -1
COL6A2-204ENST00000409416 DNAH10OSP0CZ25 163 aa8.77□□□□□ -1.01
COL6A2-204ENST00000409416 TRAV7A0A075B6U4 112 aa8.77□□□□□ -1.01
COL6A2-204ENST00000409416 GVQW2A0A096LPI5 108 aaPredicted RBP8.77□□□□□ -1.01
COL6A2-204ENST00000409416 MDFIQ99750 246 aa8.77□□□□□ -1.01
COL6A2-204ENST00000409416 PDE6GP18545 87 aa8.76□□□□□ -1.01
COL6A2-204ENST00000409416 TM2D3Q9BRN9 247 aa8.75□□□□□ -1.01
COL6A2-204ENST00000409416 SPTSSBQ8NFR3 76 aa8.73□□□□□ -1.01
COL6A2-204ENST00000409416 LINC00528Q8N1L1 170 aa8.72□□□□□ -1.01
COL6A2-204ENST00000409416 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
COL6A2-204ENST00000409416 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.01
COL6A2-204ENST00000409416 MRPL55Q7Z7F7 128 aaKnown RBP8.71□□□□□ -1.01
COL6A2-204ENST00000409416 ERC2-IT1O76042 136 aa8.71□□□□□ -1.01
COL6A2-204ENST00000409416 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.01
COL6A2-204ENST00000409416 LINC01556Q5JQF7 62 aa8.71□□□□□ -1.02
COL6A2-204ENST00000409416 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
COL6A2-204ENST00000409416 H3BQ85 93 aa8.7□□□□□ -1.02
COL6A2-204ENST00000409416 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
COL6A2-204ENST00000409416 UBE2AP49459 152 aa8.69□□□□□ -1.02
COL6A2-204ENST00000409416 CXCL6P80162 114 aa8.69□□□□□ -1.02
COL6A2-204ENST00000409416 KRTAP26-1Q6PEX3 210 aa8.69□□□□□ -1.02
COL6A2-204ENST00000409416 IGLV9-49A0A0B4J1Y8 123 aa8.68□□□□□ -1.02
COL6A2-204ENST00000409416 TMEM254Q8TBM7 123 aa8.66□□□□□ -1.02
COL6A2-204ENST00000409416 KRTAP1-5Q9BYS1 174 aa8.66□□□□□ -1.02
COL6A2-204ENST00000409416 C1orf137Q5JT78 98 aa8.66□□□□□ -1.02
COL6A2-204ENST00000409416 Q8N377 158 aa8.65□□□□□ -1.02
COL6A2-204ENST00000409416 RPL37AP61513 92 aaKnown RBP8.64□□□□□ -1.03
COL6A2-204ENST00000409416 ANAPC11Q9NYG5 84 aa8.64□□□□□ -1.03
COL6A2-204ENST00000409416 H3BNG1 76 aa8.63□□□□□ -1.03
COL6A2-204ENST00000409416 LY6G6CO95867 125 aa8.63□□□□□ -1.03
COL6A2-204ENST00000409416 A0A087WSZ3 146 aa8.62□□□□□ -1.03
COL6A2-204ENST00000409416 KLKP1Q107X0 134 aa8.62□□□□□ -1.03
COL6A2-204ENST00000409416 NDUFC1O43677 76 aa8.61□□□□□ -1.03
COL6A2-204ENST00000409416 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
COL6A2-204ENST00000409416 H0Y9J4 135 aa8.6□□□□□ -1.03
COL6A2-204ENST00000409416 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
COL6A2-204ENST00000409416 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
COL6A2-204ENST00000409416 IGKV4-1P06312 121 aa8.6□□□□□ -1.03
COL6A2-204ENST00000409416 Q6ZRX8 168 aa8.6□□□□□ -1.03
COL6A2-204ENST00000409416 Q9BRP9 147 aa8.6□□□□□ -1.03
COL6A2-204ENST00000409416 SMIM29Q86T20 159 aa8.58□□□□□ -1.04
COL6A2-204ENST00000409416 DHRS4-AS1Q9P1J3 65 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms