RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 A0A1B0GU69 56 aa3.22□□□□□ -1.89
SCN3A-203ENST00000409101 ANKRD17O75179 2603 aaKnown RBP3.22□□□□□ -1.89
SCN3A-203ENST00000409101 M0R2T5 61 aa3.22□□□□□ -1.89
SCN3A-203ENST00000409101 ABCA12Q86UK0 2595 aa3.21□□□□□ -1.89
SCN3A-203ENST00000409101 LITAFQ99732 161 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 A0A1B0GVX0 72 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 CCDC179H3BU77 68 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 PRR26Q8N8Z3 221 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 C8orf17Q9NRJ1 99 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 A0A0U1RQV1 116 aa3.21□□□□□ -1.9
SCN3A-203ENST00000409101 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.2□□□□□ -1.9
SCN3A-203ENST00000409101 BAHCC1Q9P281 2608 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 MYO18BQ8IUG5 2567 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 A0A0C4DFX4 3053 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 KRTAP21-3Q3LHN1 58 aa3.2□□□□□ -1.9
SCN3A-203ENST00000409101 F8P00451 2351 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 TNRC18O15417 2968 aaPredicted RBP3.19□□□□□ -1.9
SCN3A-203ENST00000409101 GOLGB1Q14789 3259 aaKnown RBP3.19□□□□□ -1.9
SCN3A-203ENST00000409101 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 PCNTO95613 3336 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 K7EQZ3 153 aa3.19□□□□□ -1.9
SCN3A-203ENST00000409101 Q8N377 158 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 CD164Q04900 197 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 UNC79Q9P2D8 2635 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 FAM229BQ4G0N7 80 aa3.18□□□□□ -1.9
SCN3A-203ENST00000409101 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 PRR15Q8IV56 129 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 ZFYVE26Q68DK2 2539 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 PSPHP1O15172 72 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
SCN3A-203ENST00000409101 C2CD3Q4AC94 2353 aa3.16□□□□□ -1.9
SCN3A-203ENST00000409101 FN1P02751 2386 aaKnown RBP3.15□□□□□ -1.91
SCN3A-203ENST00000409101 OXTP01178 125 aa3.14□□□□□ -1.91
SCN3A-203ENST00000409101 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
SCN3A-203ENST00000409101 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
SCN3A-203ENST00000409101 KRTAP10-1P60331 282 aa3.14□□□□□ -1.91
SCN3A-203ENST00000409101 USP9XQ93008 2570 aaPredicted RBP3.13□□□□□ -1.91
SCN3A-203ENST00000409101 CR1P17927 2039 aa3.13□□□□□ -1.91
SCN3A-203ENST00000409101 KRTAP10-2P60368 255 aa3.13□□□□□ -1.91
SCN3A-203ENST00000409101 SMCPP49901 116 aaPredicted RBP3.13□□□□□ -1.91
SCN3A-203ENST00000409101 POLQO75417 2590 aa3.12□□□□□ -1.91
SCN3A-203ENST00000409101 MAST4O15021 2626 aa3.12□□□□□ -1.91
SCN3A-203ENST00000409101 HECTD1Q9ULT8 2610 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 MYO9AB2RTY4 2548 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 IGLV5-48A0A075B6I7 105 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 EIF4EBP3O60516 100 aaPredicted RBP3.11□□□□□ -1.91
SCN3A-203ENST00000409101 CHD6Q8TD26 2715 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
SCN3A-203ENST00000409101 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 Q8N1X5 172 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 COA5Q86WW8 74 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 PRO0461Q9UI25 63 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 ACANP16112 2415 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 TLN2Q9Y4G6 2542 aa3.1□□□□□ -1.91
SCN3A-203ENST00000409101 MUC4Q99102 2169 aa3.09□□□□□ -1.91
SCN3A-203ENST00000409101 A0A1W2PNM2 257 aa3.09□□□□□ -1.91
SCN3A-203ENST00000409101 LINC01600Q96MT4 127 aa3.09□□□□□ -1.91
SCN3A-203ENST00000409101 Q6ZR54 194 aa3.08□□□□□ -1.92
SCN3A-203ENST00000409101 TRANK1O15050 2925 aa3.08□□□□□ -1.92
SCN3A-203ENST00000409101 USP9YO00507 2555 aaPredicted RBP3.07□□□□□ -1.92
SCN3A-203ENST00000409101 WDR87Q6ZQQ6 2873 aa3.07□□□□□ -1.92
SCN3A-203ENST00000409101 MTORP42345 2549 aa3.07□□□□□ -1.92
SCN3A-203ENST00000409101 C1orf195Q5TG92 126 aa3.07□□□□□ -1.92
SCN3A-203ENST00000409101 ZCCHC13Q8WW36 166 aaKnown RBP3.06□□□□□ -1.92
SCN3A-203ENST00000409101 FP248Q71RG6 208 aaPredicted RBP3.06□□□□□ -1.92
SCN3A-203ENST00000409101 S4R3F8 94 aa3.06□□□□□ -1.92
SCN3A-203ENST00000409101 RANBP2P49792 3224 aaKnown RBP3.06□□□□□ -1.92
SCN3A-203ENST00000409101 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
SCN3A-203ENST00000409101 FAM104AQ969W3 186 aa3.06□□□□□ -1.92
SCN3A-203ENST00000409101 HRES1P13985 223 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 A0A0D9SG42 100 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 UQCR11O14957 56 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 CSAG1Q6PB30 78 aa3.05□□□□□ -1.92
SCN3A-203ENST00000409101 CENPFP49454 3210 aa3.04□□□□□ -1.92
SCN3A-203ENST00000409101 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
SCN3A-203ENST00000409101 USP24Q9UPU5 2620 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 A8MUN3 132 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 SPRR1AP35321 89 aa3.03□□□□□ -1.92
SCN3A-203ENST00000409101 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.93
SCN3A-203ENST00000409101 KRTAP26-1Q6PEX3 210 aa3.03□□□□□ -1.93
SCN3A-203ENST00000409101 HELZ2Q9BYK8 2649 aaKnown RBP3.02□□□□□ -1.93
SCN3A-203ENST00000409101 SPRR1BP22528 89 aa3.02□□□□□ -1.93
SCN3A-203ENST00000409101 C4orf26Q17RF5 130 aa3.01□□□□□ -1.93
SCN3A-203ENST00000409101 LINC00483Q53H64 154 aa3.01□□□□□ -1.93
SCN3A-203ENST00000409101 SETXQ7Z333 2677 aaKnown RBP3□□□□□ -1.93
SCN3A-203ENST00000409101 SETD2Q9BYW2 2564 aaPredicted RBP2.99□□□□□ -1.93
SCN3A-203ENST00000409101 SPINK7P58062 85 aa2.99□□□□□ -1.93
SCN3A-203ENST00000409101 CYP4F30PQ9H0H9 118 aa2.99□□□□□ -1.93
SCN3A-203ENST00000409101 GCN1Q92616 2671 aaKnown RBP2.99□□□□□ -1.93
SCN3A-203ENST00000409101 PANO1I0J062 215 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 COL6A3P12111 3177 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 ZNF292O60281 2723 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 KMT2BQ9UMN6 2715 aaPredicted RBP2.98□□□□□ -1.93
SCN3A-203ENST00000409101 Q8NDZ9 215 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 FLNAP21333 2647 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms