RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 TRIOO75962 3097 aa3.12□□□□□ -1.91
PCDH11X-207ENST00000406881 LCE2DQ5TA82 110 aaPredicted RBP3.12□□□□□ -1.91
PCDH11X-207ENST00000406881 SERTAD4-AS1Q5TG53 156 aa3.12□□□□□ -1.91
PCDH11X-207ENST00000406881 PHF5AQ7RTV0 110 aaKnown RBP3.12□□□□□ -1.91
PCDH11X-207ENST00000406881 LAMA2P24043 3122 aaKnown RBP3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 CNBPP62633 177 aaKnown RBP3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 CASC2Q6XLA1 102 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 C9orf163Q8N9P6 203 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 IGLV5-37A0A075B6J1 123 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 CDH23Q9H251 3354 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 TRBV7-4A0A0J9YYF1 115 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 EPM2AB3EWF7 344 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 HCG22E2RYF7 251 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 C9orf129Q5T035 196 aaKnown RBP3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 CIRBP-AS1Q8TBR5 109 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 LINC00476Q8WZB0 136 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 LIMD2Q9BT23 127 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 NBEAL1Q6ZS30 2694 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 UNC80Q8N2C7 3258 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 A6NED7 52 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 PSPHP1O15172 72 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 FAM30AQ9NZY2 134 aa3.11□□□□□ -1.91
PCDH11X-207ENST00000406881 PRR4Q16378 134 aa3.1□□□□□ -1.91
PCDH11X-207ENST00000406881 CENPEQ02224 2701 aa3.1□□□□□ -1.91
PCDH11X-207ENST00000406881 FAM168BA1KXE4 195 aa3.09□□□□□ -1.91
PCDH11X-207ENST00000406881 CHTF8P0CG12 524 aa3.09□□□□□ -1.91
PCDH11X-207ENST00000406881 KRTAP21-3Q3LHN1 58 aa3.09□□□□□ -1.91
PCDH11X-207ENST00000406881 ST20-AS1Q8NBB2 130 aa3.09□□□□□ -1.91
PCDH11X-207ENST00000406881 A0A0C4DFX4 3053 aa3.09□□□□□ -1.92
PCDH11X-207ENST00000406881 A0A087WTM6 91 aa3.09□□□□□ -1.92
PCDH11X-207ENST00000406881 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.92
PCDH11X-207ENST00000406881 DSPP15924 2871 aaKnown RBP3.09□□□□□ -1.92
PCDH11X-207ENST00000406881 GCN1Q92616 2671 aaKnown RBP3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 WDFY4Q6ZS81 3184 aa3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 LINC00208Q96KT6 92 aa3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 IGHV6-1A0A0B4J1U7 121 aa3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 Q8N9L7 120 aa3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 TP53AIP1Q9HCN2 124 aa3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 RPL37AP61513 92 aaKnown RBP3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 MOBPQ13875 183 aa3.08□□□□□ -1.92
PCDH11X-207ENST00000406881 hDV103S1A0JD37 113 aa3.07□□□□□ -1.92
PCDH11X-207ENST00000406881 OBSCN-AS1Q96MR7 158 aa3.07□□□□□ -1.92
PCDH11X-207ENST00000406881 H3BPC8 53 aa3.07□□□□□ -1.92
PCDH11X-207ENST00000406881 Q8N377 158 aa3.07□□□□□ -1.92
PCDH11X-207ENST00000406881 H0Y9P7 68 aa3.06□□□□□ -1.92
PCDH11X-207ENST00000406881 CD164Q04900 197 aa3.06□□□□□ -1.92
PCDH11X-207ENST00000406881 CASC10Q5T4H9 136 aa3.06□□□□□ -1.92
PCDH11X-207ENST00000406881 J3QL48 77 aa3.06□□□□□ -1.92
PCDH11X-207ENST00000406881 KMT2BQ9UMN6 2715 aaPredicted RBP3.06□□□□□ -1.92
PCDH11X-207ENST00000406881 ZNF861PO60384 105 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 DEFB116Q30KQ4 102 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 SMIM29Q86T20 159 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 ERC2-IT1O76042 136 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 SSBP3-AS1Q7Z2R9 100 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 A0A1W2PNN7 141 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 DNAH14Q0VDD8 3507 aa3.05□□□□□ -1.92
PCDH11X-207ENST00000406881 DMBT1Q9UGM3 2413 aaPredicted RBP3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 IGLV5-48A0A075B6I7 105 aa3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 IGFL1Q6UW32 110 aa3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 CFAP54Q96N23 3096 aa3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 A8MWP4 228 aa3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 COL6A5A8TX70 2615 aa3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 CHD6Q8TD26 2715 aa3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 C8orf87E5RJ46 101 aa3.04□□□□□ -1.92
PCDH11X-207ENST00000406881 KRTAP26-1Q6PEX3 210 aa3.03□□□□□ -1.92
PCDH11X-207ENST00000406881 C1orf64Q8NEQ6 169 aa3.03□□□□□ -1.92
PCDH11X-207ENST00000406881 VPS13AQ96RL7 3174 aa3.03□□□□□ -1.92
PCDH11X-207ENST00000406881 Q5XG85 94 aa3.03□□□□□ -1.92
PCDH11X-207ENST00000406881 SPRR1AP35321 89 aa3.02□□□□□ -1.93
PCDH11X-207ENST00000406881 DMDP11532 3685 aa3.02□□□□□ -1.93
PCDH11X-207ENST00000406881 FLNCQ14315 2725 aa3.02□□□□□ -1.93
PCDH11X-207ENST00000406881 FAM229AH3BQW9 127 aa3.02□□□□□ -1.93
PCDH11X-207ENST00000406881 TYMSOSQ8TAI1 123 aa3.02□□□□□ -1.93
PCDH11X-207ENST00000406881 SPRR4Q96PI1 79 aa3.02□□□□□ -1.93
PCDH11X-207ENST00000406881 H7BZZ5 65 aa3.02□□□□□ -1.93
PCDH11X-207ENST00000406881 A0A1W2PNM2 257 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 IGLV7-43P04211 117 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 TRAV22A0A0B4J277 110 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 PRR15Q8IV56 129 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 LAMA1P25391 3075 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 PSORS1C2Q9UIG4 136 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 K7EQZ3 153 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 KLKP1Q107X0 134 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 SPAG11AQ6PDA7 123 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 SPACA4Q8TDM5 124 aa3.01□□□□□ -1.93
PCDH11X-207ENST00000406881 TEX15Q9BXT5 2789 aa3□□□□□ -1.93
PCDH11X-207ENST00000406881 PLA2G1BP04054 148 aaKnown RBP3□□□□□ -1.93
PCDH11X-207ENST00000406881 LINC00313P59037 77 aa3□□□□□ -1.93
PCDH11X-207ENST00000406881 PCOTHQ58A44 107 aa3□□□□□ -1.93
PCDH11X-207ENST00000406881 Q8NDZ9 215 aa3□□□□□ -1.93
PCDH11X-207ENST00000406881 MRPL34Q9BQ48 92 aaKnown RBP3□□□□□ -1.93
PCDH11X-207ENST00000406881 LOC101927531A0A1B0GV80 90 aa2.99□□□□□ -1.93
PCDH11X-207ENST00000406881 CYSTM1Q9H1C7 97 aa2.99□□□□□ -1.93
PCDH11X-207ENST00000406881 A0A1B0GVX0 72 aa2.98□□□□□ -1.93
PCDH11X-207ENST00000406881 A8MUN3 132 aa2.98□□□□□ -1.93
PCDH11X-207ENST00000406881 SPRR1BP22528 89 aa2.98□□□□□ -1.93
PCDH11X-207ENST00000406881 C8orf17Q9NRJ1 99 aa2.98□□□□□ -1.93
PCDH11X-207ENST00000406881 PLAC8Q9NZF1 115 aa2.98□□□□□ -1.93
PCDH11X-207ENST00000406881 WDFY3Q8IZQ1 3526 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms