RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TM2D3Q9BRN9 247 aa13.11□□□□□ -0.31
CCDC47-202ENST00000403162 H3BNG1 76 aa13.1□□□□□ -0.31
CCDC47-202ENST00000403162 KLKP1Q107X0 134 aa13.1□□□□□ -0.31
CCDC47-202ENST00000403162 WFDC10BQ8IUB3 73 aa13.1□□□□□ -0.31
CCDC47-202ENST00000403162 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
CCDC47-202ENST00000403162 H7BZZ5 65 aa13.08□□□□□ -0.31
CCDC47-202ENST00000403162 Q6ZRU5 148 aa13.08□□□□□ -0.31
CCDC47-202ENST00000403162 FAM236DA0A1B0GTK5 79 aa13.08□□□□□ -0.32
CCDC47-202ENST00000403162 FAM236CP0DP71 79 aa13.08□□□□□ -0.32
CCDC47-202ENST00000403162 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
CCDC47-202ENST00000403162 B9D2Q9BPU9 175 aa13.05□□□□□ -0.32
CCDC47-202ENST00000403162 SCXQ7RTU7 201 aa13.03□□□□□ -0.32
CCDC47-202ENST00000403162 Q5XG85 94 aa13.02□□□□□ -0.33
CCDC47-202ENST00000403162 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
CCDC47-202ENST00000403162 F8WDY8 70 aa13.01□□□□□ -0.33
CCDC47-202ENST00000403162 TENM3Q9P273 2699 aa13□□□□□ -0.33
CCDC47-202ENST00000403162 Q6ZRP5 223 aa13□□□□□ -0.33
CCDC47-202ENST00000403162 SERP1Q9Y6X1 66 aa13□□□□□ -0.33
CCDC47-202ENST00000403162 SNURFQ9Y675 71 aa12.98□□□□□ -0.33
CCDC47-202ENST00000403162 HUWE1Q7Z6Z7 4374 aaKnown RBP12.98□□□□□ -0.33
CCDC47-202ENST00000403162 C1orf43Q9BWL3 253 aa12.97□□□□□ -0.33
CCDC47-202ENST00000403162 RMI2Q96E14 147 aa12.97□□□□□ -0.33
CCDC47-202ENST00000403162 C11orf45Q8TAV5 145 aa12.96□□□□□ -0.33
CCDC47-202ENST00000403162 MEGF8Q7Z7M0 2845 aa12.96□□□□□ -0.33
CCDC47-202ENST00000403162 C4orf26Q17RF5 130 aa12.96□□□□□ -0.34
CCDC47-202ENST00000403162 ESRGQ1W209 222 aa12.96□□□□□ -0.34
CCDC47-202ENST00000403162 Q6ZTC4 211 aa12.96□□□□□ -0.34
CCDC47-202ENST00000403162 KCNQ1DNQ9H478 68 aa12.96□□□□□ -0.34
CCDC47-202ENST00000403162 NDUFC1O43677 76 aa12.95□□□□□ -0.34
CCDC47-202ENST00000403162 DNAH9Q9NYC9 4486 aa12.94□□□□□ -0.34
CCDC47-202ENST00000403162 NREPQ16612 68 aa12.94□□□□□ -0.34
CCDC47-202ENST00000403162 LINC01556Q5JQF7 62 aa12.94□□□□□ -0.34
CCDC47-202ENST00000403162 F8WEM9 126 aa12.93□□□□□ -0.34
CCDC47-202ENST00000403162 BPY2O14599 106 aa12.93□□□□□ -0.34
CCDC47-202ENST00000403162 SYCNQ0VAF6 134 aa12.93□□□□□ -0.34
CCDC47-202ENST00000403162 ERC2-IT1O76042 136 aa12.92□□□□□ -0.34
CCDC47-202ENST00000403162 IGKV4-1P06312 121 aa12.92□□□□□ -0.34
CCDC47-202ENST00000403162 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
CCDC47-202ENST00000403162 NKAPP1Q8N9T2 125 aa12.91□□□□□ -0.34
CCDC47-202ENST00000403162 Q8N377 158 aa12.89□□□□□ -0.35
CCDC47-202ENST00000403162 C7orf33Q8WU49 177 aa12.89□□□□□ -0.35
CCDC47-202ENST00000403162 IGLV5-48A0A075B6I7 105 aa12.88□□□□□ -0.35
CCDC47-202ENST00000403162 SERTAD4-AS1Q5TG53 156 aa12.88□□□□□ -0.35
CCDC47-202ENST00000403162 PRKDCP78527 4128 aaKnown RBP12.88□□□□□ -0.35
CCDC47-202ENST00000403162 COL7A1Q02388 2944 aa12.88□□□□□ -0.35
CCDC47-202ENST00000403162 HRCT1Q6UXD1 115 aa12.88□□□□□ -0.35
CCDC47-202ENST00000403162 Q8N9L7 120 aa12.88□□□□□ -0.35
CCDC47-202ENST00000403162 ATP5EP56381 51 aaPredicted RBP12.87□□□□□ -0.35
CCDC47-202ENST00000403162 TMEM254Q8TBM7 123 aa12.86□□□□□ -0.35
CCDC47-202ENST00000403162 PLA2G2DQ9UNK4 145 aa12.86□□□□□ -0.35
CCDC47-202ENST00000403162 DEFB131BA0A096LNP1 70 aa12.86□□□□□ -0.35
CCDC47-202ENST00000403162 TLX1NBP0CAT3 122 aa12.86□□□□□ -0.35
CCDC47-202ENST00000403162 A0A1B0GW54 56 aa12.84□□□□□ -0.35
CCDC47-202ENST00000403162 OCR1Q9BZK8 76 aa12.84□□□□□ -0.35
CCDC47-202ENST00000403162 DHRS4-AS1Q9P1J3 65 aa12.84□□□□□ -0.35
CCDC47-202ENST00000403162 C3orf84H3BNL1 204 aa12.84□□□□□ -0.35
CCDC47-202ENST00000403162 DEFB105AQ8NG35 78 aa12.84□□□□□ -0.35
CCDC47-202ENST00000403162 Q6ZRX8 168 aa12.83□□□□□ -0.36
CCDC47-202ENST00000403162 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
CCDC47-202ENST00000403162 IGLV5-37A0A075B6J1 123 aa12.81□□□□□ -0.36
CCDC47-202ENST00000403162 KRTAP4-16G5E9R7 235 aaPredicted RBP12.81□□□□□ -0.36
CCDC47-202ENST00000403162 PRYO14603 147 aa12.8□□□□□ -0.36
CCDC47-202ENST00000403162 FUSP35637 526 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC47-202ENST00000403162 SMIM26A0A096LP01 95 aa12.79□□□□□ -0.36
CCDC47-202ENST00000403162 SPRR1AP35321 89 aa12.79□□□□□ -0.36
CCDC47-202ENST00000403162 TNP2Q05952 138 aa12.79□□□□□ -0.36
CCDC47-202ENST00000403162 Q9BRP9 147 aa12.79□□□□□ -0.36
CCDC47-202ENST00000403162 STAB2Q8WWQ8 2551 aa12.78□□□□□ -0.36
CCDC47-202ENST00000403162 A0A0U1RQV1 116 aa12.78□□□□□ -0.36
CCDC47-202ENST00000403162 IGLV1-50A0A075B6I6 118 aa12.77□□□□□ -0.36
CCDC47-202ENST00000403162 A0A1W2PNM2 257 aa12.76□□□□□ -0.37
CCDC47-202ENST00000403162 FBN3Q75N90 2809 aa12.76□□□□□ -0.37
CCDC47-202ENST00000403162 RPL37AP8A6NKH3 93 aa12.75□□□□□ -0.37
CCDC47-202ENST00000403162 ETDCA0A1B0GVM5 59 aa12.74□□□□□ -0.37
CCDC47-202ENST00000403162 C1orf137Q5JT78 98 aa12.74□□□□□ -0.37
CCDC47-202ENST00000403162 FP248Q71RG6 208 aaPredicted RBP12.74□□□□□ -0.37
CCDC47-202ENST00000403162 FAM168BA1KXE4 195 aa12.73□□□□□ -0.37
CCDC47-202ENST00000403162 Q8NBF4 154 aa12.73□□□□□ -0.37
CCDC47-202ENST00000403162 SPRR4Q96PI1 79 aa12.71□□□□□ -0.37
CCDC47-202ENST00000403162 KRTAP7-1Q8IUC3 87 aa12.7□□□□□ -0.38
CCDC47-202ENST00000403162 ST20-AS1Q8NBB2 130 aa12.7□□□□□ -0.38
CCDC47-202ENST00000403162 SMIM29Q86T20 159 aa12.68□□□□□ -0.38
CCDC47-202ENST00000403162 CASC10Q5T4H9 136 aa12.67□□□□□ -0.38
CCDC47-202ENST00000403162 LCE6AA0A183 80 aa12.66□□□□□ -0.38
CCDC47-202ENST00000403162 MRPL55Q7Z7F7 128 aaKnown RBP12.66□□□□□ -0.38
CCDC47-202ENST00000403162 HIGD2AQ9BW72 106 aa12.66□□□□□ -0.38
CCDC47-202ENST00000403162 LINC00588Q9Y4M8 146 aa12.66□□□□□ -0.38
CCDC47-202ENST00000403162 NUPR2A6NF83 97 aa12.64□□□□□ -0.39
CCDC47-202ENST00000403162 LINC00474Q9P2X8 69 aa12.63□□□□□ -0.39
CCDC47-202ENST00000403162 FAM30AQ9NZY2 134 aa12.63□□□□□ -0.39
CCDC47-202ENST00000403162 DSCR10P59022 87 aa12.62□□□□□ -0.39
CCDC47-202ENST00000403162 UBE2BP63146 152 aa12.61□□□□□ -0.39
CCDC47-202ENST00000403162 LINC00336Q6ZUF6 198 aa12.6□□□□□ -0.39
CCDC47-202ENST00000403162 DNAH1Q9P2D7 4330 aa12.6□□□□□ -0.39
CCDC47-202ENST00000403162 REG3GQ6UW15 175 aa12.59□□□□□ -0.39
CCDC47-202ENST00000403162 APLNQ9ULZ1 77 aa12.59□□□□□ -0.39
CCDC47-202ENST00000403162 PRO0628Q9UI54 55 aa12.58□□□□□ -0.4
CCDC47-202ENST00000403162 TGP01266 2768 aa12.58□□□□□ -0.4
CCDC47-202ENST00000403162 K7EQZ3 153 aa12.57□□□□□ -0.4
CCDC47-202ENST00000403162 FAM229BQ4G0N7 80 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms