RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 LINC01600Q96MT4 127 aa14.04□□□□□ -0.16
ANKRD28-201ENST00000399451 LINC00612Q8N6U2 182 aa14.03□□□□□ -0.16
ANKRD28-201ENST00000399451 PLA2G2DQ9UNK4 145 aa14.02□□□□□ -0.16
ANKRD28-201ENST00000399451 TLX1NBP0CAT3 122 aa14□□□□□ -0.17
ANKRD28-201ENST00000399451 ANKRD17O75179 2603 aaKnown RBP14□□□□□ -0.17
ANKRD28-201ENST00000399451 A0A1B0GVX0 72 aa14□□□□□ -0.17
ANKRD28-201ENST00000399451 A0A096LNT2 108 aa13.99□□□□□ -0.17
ANKRD28-201ENST00000399451 UQCR11O14957 56 aa13.98□□□□□ -0.17
ANKRD28-201ENST00000399451 CHD8Q9HCK8 2581 aa13.98□□□□□ -0.17
ANKRD28-201ENST00000399451 SSBP3-AS1Q7Z2R9 100 aa13.98□□□□□ -0.17
ANKRD28-201ENST00000399451 SPINT4Q6UDR6 99 aa13.97□□□□□ -0.17
ANKRD28-201ENST00000399451 SETD2Q9BYW2 2564 aaPredicted RBP13.96□□□□□ -0.17
ANKRD28-201ENST00000399451 APLNQ9ULZ1 77 aa13.93□□□□□ -0.18
ANKRD28-201ENST00000399451 H7BZZ5 65 aa13.93□□□□□ -0.18
ANKRD28-201ENST00000399451 ANAPC11Q9NYG5 84 aa13.93□□□□□ -0.18
ANKRD28-201ENST00000399451 CEP295Q9C0D2 2601 aa13.93□□□□□ -0.18
ANKRD28-201ENST00000399451 A0A0G2JQZ4 141 aa13.93□□□□□ -0.18
ANKRD28-201ENST00000399451 A0A1W2PNN7 141 aa13.93□□□□□ -0.18
ANKRD28-201ENST00000399451 IGLV5-37A0A075B6J1 123 aa13.92□□□□□ -0.18
ANKRD28-201ENST00000399451 IGLV7-43P04211 117 aa13.92□□□□□ -0.18
ANKRD28-201ENST00000399451 RBM12B-AS1Q9P1G2 102 aa13.92□□□□□ -0.18
ANKRD28-201ENST00000399451 C9orf163Q8N9P6 203 aa13.91□□□□□ -0.18
ANKRD28-201ENST00000399451 SPTBN4Q9H254 2564 aa13.9□□□□□ -0.18
ANKRD28-201ENST00000399451 USP9YO00507 2555 aaPredicted RBP13.89□□□□□ -0.19
ANKRD28-201ENST00000399451 MIR22HGQ0VDD5 57 aa13.88□□□□□ -0.19
ANKRD28-201ENST00000399451 PKD1L2Q7Z442 2459 aa13.88□□□□□ -0.19
ANKRD28-201ENST00000399451 PSORS1C2Q9UIG4 136 aa13.85□□□□□ -0.19
ANKRD28-201ENST00000399451 FASNP49327 2511 aaKnown RBP13.81□□□□□ -0.2
ANKRD28-201ENST00000399451 MTORP42345 2549 aa13.8□□□□□ -0.2
ANKRD28-201ENST00000399451 A0A1W2PNM2 257 aa13.8□□□□□ -0.2
ANKRD28-201ENST00000399451 ZNF575Q86XF7 245 aa13.8□□□□□ -0.2
ANKRD28-201ENST00000399451 CENPFP49454 3210 aa13.79□□□□□ -0.2
ANKRD28-201ENST00000399451 CASC10Q5T4H9 136 aa13.79□□□□□ -0.2
ANKRD28-201ENST00000399451 SPRR4Q96PI1 79 aa13.77□□□□□ -0.21
ANKRD28-201ENST00000399451 CNBPP62633 177 aaKnown RBP13.76□□□□□ -0.21
ANKRD28-201ENST00000399451 F8P00451 2351 aa13.76□□□□□ -0.21
ANKRD28-201ENST00000399451 KRTAP1-3Q8IUG1 177 aa13.76□□□□□ -0.21
ANKRD28-201ENST00000399451 ACANP16112 2415 aa13.75□□□□□ -0.21
ANKRD28-201ENST00000399451 SPANXA2-OT1Q8N9U9 137 aa13.75□□□□□ -0.21
ANKRD28-201ENST00000399451 LINC01554Q52M75 96 aa13.74□□□□□ -0.21
ANKRD28-201ENST00000399451 POLQO75417 2590 aa13.73□□□□□ -0.21
ANKRD28-201ENST00000399451 CRIPTQ9P021 101 aa13.72□□□□□ -0.21
ANKRD28-201ENST00000399451 IGLV5-48A0A075B6I7 105 aa13.7□□□□□ -0.22
ANKRD28-201ENST00000399451 KRTAP1-1Q07627 177 aa13.67□□□□□ -0.22
ANKRD28-201ENST00000399451 TNP2Q05952 138 aa13.66□□□□□ -0.22
ANKRD28-201ENST00000399451 KTN1-AS1Q86SY8 53 aa13.66□□□□□ -0.22
ANKRD28-201ENST00000399451 CD164Q04900 197 aa13.63□□□□□ -0.23
ANKRD28-201ENST00000399451 Q6ZSA8 131 aa13.62□□□□□ -0.23
ANKRD28-201ENST00000399451 FAM104AQ969W3 186 aa13.62□□□□□ -0.23
ANKRD28-201ENST00000399451 Q8N1X5 172 aa13.59□□□□□ -0.23
ANKRD28-201ENST00000399451 A0A0D9SG42 100 aa13.58□□□□□ -0.24
ANKRD28-201ENST00000399451 OCR1Q9BZK8 76 aa13.57□□□□□ -0.24
ANKRD28-201ENST00000399451 M0R2T5 61 aa13.57□□□□□ -0.24
ANKRD28-201ENST00000399451 CDC42SE1Q9NRR8 79 aa13.57□□□□□ -0.24
ANKRD28-201ENST00000399451 LCA10Q71F78 164 aa13.56□□□□□ -0.24
ANKRD28-201ENST00000399451 IGLV7-46A0A075B6I9 117 aa13.55□□□□□ -0.24
ANKRD28-201ENST00000399451 Q1T7F1 81 aa13.49□□□□□ -0.25
ANKRD28-201ENST00000399451 PRR26Q8N8Z3 221 aa13.49□□□□□ -0.25
ANKRD28-201ENST00000399451 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.42□□□□□ -0.26
ANKRD28-201ENST00000399451 GOLGB1Q14789 3259 aaKnown RBP13.36□□□□□ -0.27
ANKRD28-201ENST00000399451 CAMK2N1Q7Z7J9 78 aa13.31□□□□□ -0.28
ANKRD28-201ENST00000399451 HRES1P13985 223 aa13.3□□□□□ -0.28
ANKRD28-201ENST00000399451 Q75L30 129 aa13.29□□□□□ -0.28
ANKRD28-201ENST00000399451 EPG5Q9HCE0 2579 aa13.29□□□□□ -0.28
ANKRD28-201ENST00000399451 MMP24-AS1A0A0U1RRL7 71 aa13.25□□□□□ -0.29
ANKRD28-201ENST00000399451 HECTD1Q9ULT8 2610 aa13.25□□□□□ -0.29
ANKRD28-201ENST00000399451 FAM229BQ4G0N7 80 aa13.25□□□□□ -0.29
ANKRD28-201ENST00000399451 Q8NDZ9 215 aa13.25□□□□□ -0.29
ANKRD28-201ENST00000399451 WIPF1O43516 503 aa13.22□□□□□ -0.29
ANKRD28-201ENST00000399451 SPRR1AP35321 89 aa13.21□□□□□ -0.29
ANKRD28-201ENST00000399451 A0A1B0GU33 70 aa13.21□□□□□ -0.3
ANKRD28-201ENST00000399451 PLAC8Q9NZF1 115 aa13.2□□□□□ -0.3
ANKRD28-201ENST00000399451 CR1P17927 2039 aa13.2□□□□□ -0.3
ANKRD28-201ENST00000399451 LINC01558Q9Y6Z2 57 aa13.18□□□□□ -0.3
ANKRD28-201ENST00000399451 USP24Q9UPU5 2620 aa13.17□□□□□ -0.3
ANKRD28-201ENST00000399451 Q5XG85 94 aa13.17□□□□□ -0.3
ANKRD28-201ENST00000399451 MGAM2Q2M2H8 2515 aa13.16□□□□□ -0.3
ANKRD28-201ENST00000399451 FLNBO75369 2602 aaKnown RBP13.14□□□□□ -0.31
ANKRD28-201ENST00000399451 Q5VSD8 79 aa13.14□□□□□ -0.31
ANKRD28-201ENST00000399451 Q8N9P0 234 aaPredicted RBP13.13□□□□□ -0.31
ANKRD28-201ENST00000399451 CYSTM1Q9H1C7 97 aa13.12□□□□□ -0.31
ANKRD28-201ENST00000399451 S4R3F8 94 aa13.12□□□□□ -0.31
ANKRD28-201ENST00000399451 ZCCHC13Q8WW36 166 aaKnown RBP13.12□□□□□ -0.31
ANKRD28-201ENST00000399451 DNAH12Q6ZR08 3092 aa13.09□□□□□ -0.31
ANKRD28-201ENST00000399451 CSAG1Q6PB30 78 aa13.09□□□□□ -0.31
ANKRD28-201ENST00000399451 LINC00483Q53H64 154 aa13.09□□□□□ -0.31
ANKRD28-201ENST00000399451 SPRR1BP22528 89 aa13.07□□□□□ -0.32
ANKRD28-201ENST00000399451 FP248Q71RG6 208 aaPredicted RBP13.07□□□□□ -0.32
ANKRD28-201ENST00000399451 LUZP6Q538Z0 58 aa13.07□□□□□ -0.32
ANKRD28-201ENST00000399451 LINC00472Q9H8W2 130 aa13.06□□□□□ -0.32
ANKRD28-201ENST00000399451 SEC61BP60468 96 aaKnown RBP13.05□□□□□ -0.32
ANKRD28-201ENST00000399451 Q5W150 140 aa13.03□□□□□ -0.32
ANKRD28-201ENST00000399451 LCE6AA0A183 80 aa13.03□□□□□ -0.32
ANKRD28-201ENST00000399451 Q5VV11 94 aa12.99□□□□□ -0.33
ANKRD28-201ENST00000399451 DMAC1Q96GE9 116 aa12.99□□□□□ -0.33
ANKRD28-201ENST00000399451 BPTFQ12830 3046 aa12.96□□□□□ -0.34
ANKRD28-201ENST00000399451 KRTAP26-1Q6PEX3 210 aa12.93□□□□□ -0.34
ANKRD28-201ENST00000399451 KRTAP10-1P60331 282 aa12.91□□□□□ -0.34
ANKRD28-201ENST00000399451 PRAC1Q96KF2 57 aa12.89□□□□□ -0.35
ANKRD28-201ENST00000399451 SPINK7P58062 85 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms