RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 RPL36ALQ969Q0 106 aaKnown RBP4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 XAGE1AQ9HD64 81 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
TM9SF4-202ENST00000398022 DYNC2H1Q8NCM8 4307 aaKnown RBP4.5□□□□□ -1.69
TM9SF4-202ENST00000398022 IGHV4-28A0A0C4DH34 117 aa4.5□□□□□ -1.69
TM9SF4-202ENST00000398022 B9D2Q9BPU9 175 aa4.5□□□□□ -1.69
TM9SF4-202ENST00000398022 LINC00476Q8WZB0 136 aa4.5□□□□□ -1.69
TM9SF4-202ENST00000398022 IGLV5-45A0A087WSX0 123 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 A8MTW9 85 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 CHTF8P0CG12 524 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 SLURP1P55000 103 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 C14orf132Q9NPU4 83 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 IGHV4-30-4P0DP06 118 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 C1orf134Q5TEV5 83 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 ENHOQ6UWT2 76 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 C1orf64Q8NEQ6 169 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 EPPK1P58107 5090 aaKnown RBP4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 RYR2Q92736 4967 aa4.49□□□□□ -1.69
TM9SF4-202ENST00000398022 TRGV1A0A0A0MS02 117 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 TRBV10-1A0A0K0K1A3 114 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 HYDINQ4G0P3 5121 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 VWFP04275 2813 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 FAM104AQ969W3 186 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 FRAS1Q86XX4 4008 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 IGLV5-39A0A0G2JS06 123 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 DEFB136Q30KP8 78 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 Q6ZSN1 163 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 CDC42SE2Q9NRR3 84 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 SACSQ9NZJ4 4579 aa4.48□□□□□ -1.69
TM9SF4-202ENST00000398022 Q6YL49 198 aa4.47□□□□□ -1.69
TM9SF4-202ENST00000398022 HAMPP81172 84 aa4.47□□□□□ -1.69
TM9SF4-202ENST00000398022 C4orf3Q8WVX3 66 aa4.47□□□□□ -1.69
TM9SF4-202ENST00000398022 LRCOL1A6NCL2 159 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 H0YGX0 51 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 ADM2Q7Z4H4 148 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 SMIM1B2RUZ4 78 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 CMC4P56277 68 aaPredicted RBP4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 LINC00158P58513 81 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 NREPQ16612 68 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 DEFB114Q30KQ6 69 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 TOMM7Q9P0U1 55 aa4.46□□□□□ -1.7
TM9SF4-202ENST00000398022 NOTCH1P46531 2555 aa4.45□□□□□ -1.7
TM9SF4-202ENST00000398022 ROMO1P60602 79 aa4.45□□□□□ -1.7
TM9SF4-202ENST00000398022 COX6A2Q02221 97 aa4.45□□□□□ -1.7
TM9SF4-202ENST00000398022 ORMDL1Q9P0S3 153 aa4.45□□□□□ -1.7
TM9SF4-202ENST00000398022 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
TM9SF4-202ENST00000398022 OBSCN-AS1Q96MR7 158 aa4.44□□□□□ -1.7
TM9SF4-202ENST00000398022 TRGV2A0A075B6R0 118 aa4.44□□□□□ -1.7
TM9SF4-202ENST00000398022 FSHBP01225 129 aa4.44□□□□□ -1.7
TM9SF4-202ENST00000398022 LECT2O14960 151 aa4.44□□□□□ -1.7
TM9SF4-202ENST00000398022 JMJD7-PLA2G4BH0Y9G9 81 aa4.43□□□□□ -1.7
TM9SF4-202ENST00000398022 COX7B2Q8TF08 81 aa4.43□□□□□ -1.7
TM9SF4-202ENST00000398022 TGP01266 2768 aa4.43□□□□□ -1.7
TM9SF4-202ENST00000398022 Q6ZTI0 123 aa4.43□□□□□ -1.7
TM9SF4-202ENST00000398022 WFDC9Q8NEX5 89 aa4.43□□□□□ -1.7
TM9SF4-202ENST00000398022 TRAV10A0A0B4J240 114 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 C22orf24Q9Y442 160 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 STARD9Q9P2P6 4700 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 TRGV4A0A0C4DH28 118 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 ODF3L2Q3SX64 289 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 MIR7-3HGQ8N6C7 128 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 NOP10Q9NPE3 64 aaKnown RBP4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 IGKV3OR2-268A0A0C4DH90 116 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 NCR3O14931 201 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 C9orf66Q5T8R8 295 aa4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
TM9SF4-202ENST00000398022 HECTD4Q9Y4D8 3996 aa4.41□□□□□ -1.7
TM9SF4-202ENST00000398022 HUWE1Q7Z6Z7 4374 aaKnown RBP4.41□□□□□ -1.7
TM9SF4-202ENST00000398022 TRBV6-4A0A1B0GX49 114 aa4.41□□□□□ -1.7
TM9SF4-202ENST00000398022 NTM-AS1Q6ZSK4 140 aa4.41□□□□□ -1.7
TM9SF4-202ENST00000398022 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.7
TM9SF4-202ENST00000398022 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
TM9SF4-202ENST00000398022 KRTAP24-1Q3LI83 254 aa4.39□□□□□ -1.71
TM9SF4-202ENST00000398022 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
TM9SF4-202ENST00000398022 SMIM11BQ8TCY0 68 aa4.38□□□□□ -1.71
TM9SF4-202ENST00000398022 SLPIP03973 132 aa4.38□□□□□ -1.71
TM9SF4-202ENST00000398022 CCL18P55774 89 aa4.38□□□□□ -1.71
TM9SF4-202ENST00000398022 RPL37AP8A6NKH3 93 aa4.38□□□□□ -1.71
TM9SF4-202ENST00000398022 K7ERS5 55 aa4.38□□□□□ -1.71
TM9SF4-202ENST00000398022 EGFEM1PQ0D2K5 195 aa4.38□□□□□ -1.71
TM9SF4-202ENST00000398022 DNAJC9-AS1A6NH13 148 aa4.37□□□□□ -1.71
TM9SF4-202ENST00000398022 ELOF1P60002 83 aaKnown RBP4.37□□□□□ -1.71
TM9SF4-202ENST00000398022 Q8NDZ9 215 aa4.37□□□□□ -1.71
TM9SF4-202ENST00000398022 FAM229AH3BQW9 127 aa4.37□□□□□ -1.71
TM9SF4-202ENST00000398022 Q8N3U1 123 aa4.37□□□□□ -1.71
TM9SF4-202ENST00000398022 IGKV2-28A0A075B6P5 120 aa4.36□□□□□ -1.71
TM9SF4-202ENST00000398022 A0A087WYN8 130 aa4.36□□□□□ -1.71
TM9SF4-202ENST00000398022 IGKV2D-28P01615 120 aa4.36□□□□□ -1.71
TM9SF4-202ENST00000398022 A8MWP4 228 aa4.36□□□□□ -1.71
TM9SF4-202ENST00000398022 BPY2O14599 106 aa4.35□□□□□ -1.71
TM9SF4-202ENST00000398022 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
TM9SF4-202ENST00000398022 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
TM9SF4-202ENST00000398022 LINC00959A0A1B0GUT2 108 aa4.35□□□□□ -1.71
TM9SF4-202ENST00000398022 MIR22HGQ0VDD5 57 aa4.35□□□□□ -1.71
TM9SF4-202ENST00000398022 Q6ZQT0 140 aa4.34□□□□□ -1.71
TM9SF4-202ENST00000398022 DEFB130BP0DP73 79 aa4.34□□□□□ -1.71
TM9SF4-202ENST00000398022 DEFB130AP0DP74 79 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms