RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 C15orf56Q8N910 161 aa12.18□□□□□ -0.46
CHRFAM7A-202ENST00000397827 COL6A5A8TX70 2615 aa12.17□□□□□ -0.46
CHRFAM7A-202ENST00000397827 JMJD7-PLA2G4BH0Y9G9 81 aa12.17□□□□□ -0.46
CHRFAM7A-202ENST00000397827 UBL5Q9BZL1 73 aa12.17□□□□□ -0.46
CHRFAM7A-202ENST00000397827 IGKV2D-24A0A075B6R9 120 aa12.15□□□□□ -0.46
CHRFAM7A-202ENST00000397827 PRB2P02812 416 aaPredicted RBP12.15□□□□□ -0.46
CHRFAM7A-202ENST00000397827 NBEAL1Q6ZS30 2694 aa12.15□□□□□ -0.46
CHRFAM7A-202ENST00000397827 DNAH3Q8TD57 4116 aa12.14□□□□□ -0.47
CHRFAM7A-202ENST00000397827 TRAV10A0A0B4J240 114 aa12.13□□□□□ -0.47
CHRFAM7A-202ENST00000397827 Q6ZQY7 126 aa12.13□□□□□ -0.47
CHRFAM7A-202ENST00000397827 MPLKIPQ8TAP9 179 aa12.13□□□□□ -0.47
CHRFAM7A-202ENST00000397827 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
CHRFAM7A-202ENST00000397827 VPREB1P12018 145 aa12.12□□□□□ -0.47
CHRFAM7A-202ENST00000397827 DIRC1Q969H9 104 aa12.11□□□□□ -0.47
CHRFAM7A-202ENST00000397827 ZNF73O43830 326 aaPredicted RBP12.11□□□□□ -0.47
CHRFAM7A-202ENST00000397827 LAMTOR3Q9UHA4 124 aa12.1□□□□□ -0.47
CHRFAM7A-202ENST00000397827 Q6ZRP5 223 aa12.09□□□□□ -0.47
CHRFAM7A-202ENST00000397827 BCE1O60756 84 aa12.08□□□□□ -0.48
CHRFAM7A-202ENST00000397827 BAHCC1Q9P281 2608 aa12.08□□□□□ -0.48
CHRFAM7A-202ENST00000397827 FAM229BQ4G0N7 80 aa12.07□□□□□ -0.48
CHRFAM7A-202ENST00000397827 HAMPP81172 84 aa12.06□□□□□ -0.48
CHRFAM7A-202ENST00000397827 COX7BP24311 80 aa12.06□□□□□ -0.48
CHRFAM7A-202ENST00000397827 M0R2N4 97 aa12.05□□□□□ -0.48
CHRFAM7A-202ENST00000397827 M0R378 163 aa12.04□□□□□ -0.48
CHRFAM7A-202ENST00000397827 ELOF1P60002 83 aaKnown RBP12.04□□□□□ -0.48
CHRFAM7A-202ENST00000397827 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
CHRFAM7A-202ENST00000397827 Q6ZQT0 140 aa12.04□□□□□ -0.48
CHRFAM7A-202ENST00000397827 DNAH10OSP0CZ25 163 aa12.03□□□□□ -0.48
CHRFAM7A-202ENST00000397827 LINC01547P58512 204 aaPredicted RBP12.03□□□□□ -0.48
CHRFAM7A-202ENST00000397827 NDUFC1O43677 76 aa12.03□□□□□ -0.48
CHRFAM7A-202ENST00000397827 TM2D3Q9BRN9 247 aa12.02□□□□□ -0.49
CHRFAM7A-202ENST00000397827 LINC00588Q9Y4M8 146 aa12.02□□□□□ -0.49
CHRFAM7A-202ENST00000397827 HUWE1Q7Z6Z7 4374 aaKnown RBP12.02□□□□□ -0.49
CHRFAM7A-202ENST00000397827 ATP5EP56381 51 aaPredicted RBP12.01□□□□□ -0.49
CHRFAM7A-202ENST00000397827 CASC10Q5T4H9 136 aa12□□□□□ -0.49
CHRFAM7A-202ENST00000397827 MGAM2Q2M2H8 2515 aa11.99□□□□□ -0.49
CHRFAM7A-202ENST00000397827 LOC110117498A0A087WWA1 95 aa11.99□□□□□ -0.49
CHRFAM7A-202ENST00000397827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.99□□□□□ -0.49
CHRFAM7A-202ENST00000397827 SERTAD4-AS1Q5TG53 156 aa11.97□□□□□ -0.49
CHRFAM7A-202ENST00000397827 TRBV7-4A0A0J9YYF1 115 aa11.96□□□□□ -0.49
CHRFAM7A-202ENST00000397827 Q6ZVQ6 151 aa11.96□□□□□ -0.49
CHRFAM7A-202ENST00000397827 LINC00528Q8N1L1 170 aa11.96□□□□□ -0.49
CHRFAM7A-202ENST00000397827 PMAIP1Q13794 54 aa11.96□□□□□ -0.5
CHRFAM7A-202ENST00000397827 DNAH1Q9P2D7 4330 aa11.95□□□□□ -0.5
CHRFAM7A-202ENST00000397827 K7EIL1 84 aa11.95□□□□□ -0.5
CHRFAM7A-202ENST00000397827 NKAPP1Q8N9T2 125 aa11.94□□□□□ -0.5
CHRFAM7A-202ENST00000397827 TMEM254Q8TBM7 123 aa11.93□□□□□ -0.5
CHRFAM7A-202ENST00000397827 H3BQ85 93 aa11.92□□□□□ -0.5
CHRFAM7A-202ENST00000397827 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
CHRFAM7A-202ENST00000397827 C7orf33Q8WU49 177 aa11.92□□□□□ -0.5
CHRFAM7A-202ENST00000397827 LYSTQ99698 3801 aa11.92□□□□□ -0.5
CHRFAM7A-202ENST00000397827 NREPQ16612 68 aa11.91□□□□□ -0.5
CHRFAM7A-202ENST00000397827 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
CHRFAM7A-202ENST00000397827 RPL37AP8A6NKH3 93 aa11.89□□□□□ -0.51
CHRFAM7A-202ENST00000397827 STAB2Q8WWQ8 2551 aa11.89□□□□□ -0.51
CHRFAM7A-202ENST00000397827 PDE6GP18545 87 aa11.89□□□□□ -0.51
CHRFAM7A-202ENST00000397827 KCNQ1DNQ9H478 68 aa11.89□□□□□ -0.51
CHRFAM7A-202ENST00000397827 CXCL6P80162 114 aa11.88□□□□□ -0.51
CHRFAM7A-202ENST00000397827 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
CHRFAM7A-202ENST00000397827 COL7A1Q02388 2944 aa11.87□□□□□ -0.51
CHRFAM7A-202ENST00000397827 PRR15Q8IV56 129 aa11.86□□□□□ -0.51
CHRFAM7A-202ENST00000397827 DEFB105AQ8NG35 78 aa11.86□□□□□ -0.51
CHRFAM7A-202ENST00000397827 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHRFAM7A-202ENST00000397827 DNAH10Q8IVF4 4471 aa11.85□□□□□ -0.51
CHRFAM7A-202ENST00000397827 BPY2O14599 106 aa11.84□□□□□ -0.51
CHRFAM7A-202ENST00000397827 KRTAP7-1Q8IUC3 87 aa11.84□□□□□ -0.51
CHRFAM7A-202ENST00000397827 PRYO14603 147 aa11.83□□□□□ -0.52
CHRFAM7A-202ENST00000397827 LRCOL1A6NCL2 159 aa11.82□□□□□ -0.52
CHRFAM7A-202ENST00000397827 PLA2G2DQ9UNK4 145 aa11.8□□□□□ -0.52
CHRFAM7A-202ENST00000397827 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
CHRFAM7A-202ENST00000397827 Q8N377 158 aa11.79□□□□□ -0.52
CHRFAM7A-202ENST00000397827 Q9BRP9 147 aa11.79□□□□□ -0.52
CHRFAM7A-202ENST00000397827 Q6ZRX8 168 aa11.78□□□□□ -0.52
CHRFAM7A-202ENST00000397827 DNAH9Q9NYC9 4486 aa11.78□□□□□ -0.52
CHRFAM7A-202ENST00000397827 ERC2-IT1O76042 136 aa11.78□□□□□ -0.52
CHRFAM7A-202ENST00000397827 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
CHRFAM7A-202ENST00000397827 KRTAP4-16G5E9R7 235 aaPredicted RBP11.77□□□□□ -0.53
CHRFAM7A-202ENST00000397827 Q8N9L7 120 aa11.76□□□□□ -0.53
CHRFAM7A-202ENST00000397827 TENM2Q9NT68 2774 aa11.76□□□□□ -0.53
CHRFAM7A-202ENST00000397827 IGLV5-37A0A075B6J1 123 aa11.76□□□□□ -0.53
CHRFAM7A-202ENST00000397827 ETDCA0A1B0GVM5 59 aa11.76□□□□□ -0.53
CHRFAM7A-202ENST00000397827 HIGD2AQ9BW72 106 aa11.75□□□□□ -0.53
CHRFAM7A-202ENST00000397827 MRPL55Q7Z7F7 128 aaKnown RBP11.75□□□□□ -0.53
CHRFAM7A-202ENST00000397827 ST20-AS1Q8NBB2 130 aa11.74□□□□□ -0.53
CHRFAM7A-202ENST00000397827 SPRR1AP35321 89 aa11.73□□□□□ -0.53
CHRFAM7A-202ENST00000397827 DHRS4-AS1Q9P1J3 65 aa11.73□□□□□ -0.53
CHRFAM7A-202ENST00000397827 C3orf84H3BNL1 204 aa11.73□□□□□ -0.53
CHRFAM7A-202ENST00000397827 PSPHP1O15172 72 aa11.72□□□□□ -0.53
CHRFAM7A-202ENST00000397827 CD164Q04900 197 aa11.71□□□□□ -0.53
CHRFAM7A-202ENST00000397827 OCR1Q9BZK8 76 aa11.71□□□□□ -0.53
CHRFAM7A-202ENST00000397827 hDV103S1A0JD37 113 aa11.7□□□□□ -0.54
CHRFAM7A-202ENST00000397827 CSMD3Q7Z407 3707 aa11.7□□□□□ -0.54
CHRFAM7A-202ENST00000397827 IGKV2-24A0A0C4DH68 120 aa11.69□□□□□ -0.54
CHRFAM7A-202ENST00000397827 IGLV5-48A0A075B6I7 105 aa11.68□□□□□ -0.54
CHRFAM7A-202ENST00000397827 DNAH7Q8WXX0 4024 aa11.68□□□□□ -0.54
CHRFAM7A-202ENST00000397827 PSCAO43653 123 aa11.68□□□□□ -0.54
CHRFAM7A-202ENST00000397827 UBE2BP63146 152 aa11.68□□□□□ -0.54
CHRFAM7A-202ENST00000397827 Q1T7F1 81 aa11.67□□□□□ -0.54
CHRFAM7A-202ENST00000397827 UBE2DNLQ8IWF7 75 aa11.67□□□□□ -0.54
CHRFAM7A-202ENST00000397827 A0A096LNI7 61 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms