RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
SEC13-204ENST00000397099 TRAV23DV6A0A075B6W5 121 aa8.12□□□□□ -1.11
SEC13-204ENST00000397099 C5orf52A6NGY3 159 aa8.12□□□□□ -1.11
SEC13-204ENST00000397099 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
SEC13-204ENST00000397099 Q6ZRX8 168 aa8.12□□□□□ -1.11
SEC13-204ENST00000397099 LINC00518Q8N0U6 118 aa8.12□□□□□ -1.11
SEC13-204ENST00000397099 SNRPEP62304 92 aaKnown RBP8.11□□□□□ -1.11
SEC13-204ENST00000397099 LINC00483Q53H64 154 aa8.11□□□□□ -1.11
SEC13-204ENST00000397099 LINC00308Q8TCZ7 52 aa8.11□□□□□ -1.11
SEC13-204ENST00000397099 ZNF73O43830 326 aaPredicted RBP8.1□□□□□ -1.11
SEC13-204ENST00000397099 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
SEC13-204ENST00000397099 Q6ZVH6 145 aa8.1□□□□□ -1.11
SEC13-204ENST00000397099 LITAFQ99732 161 aa8.1□□□□□ -1.11
SEC13-204ENST00000397099 PPDPFQ9H3Y8 114 aa8.1□□□□□ -1.11
SEC13-204ENST00000397099 NPC2P61916 151 aa8.09□□□□□ -1.11
SEC13-204ENST00000397099 SPANXDQ9BXN6 97 aa8.09□□□□□ -1.11
SEC13-204ENST00000397099 SCGB1D4Q6XE38 83 aa8.08□□□□□ -1.12
SEC13-204ENST00000397099 C3orf22Q8N5N4 141 aa8.08□□□□□ -1.12
SEC13-204ENST00000397099 IFITM1P13164 125 aa8.07□□□□□ -1.12
SEC13-204ENST00000397099 SPINK1P00995 79 aa8.06□□□□□ -1.12
SEC13-204ENST00000397099 SSBP3-AS1Q7Z2R9 100 aa8.06□□□□□ -1.12
SEC13-204ENST00000397099 OR13C6PQ8NH95 151 aa8.06□□□□□ -1.12
SEC13-204ENST00000397099 Q9BRP9 147 aa8.06□□□□□ -1.12
SEC13-204ENST00000397099 EIF4EBP3O60516 100 aaPredicted RBP8.05□□□□□ -1.12
SEC13-204ENST00000397099 S100A2P29034 98 aa8.05□□□□□ -1.12
SEC13-204ENST00000397099 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
SEC13-204ENST00000397099 DHRS4-AS1Q9P1J3 65 aa8.04□□□□□ -1.12
SEC13-204ENST00000397099 ERC2-IT1O76042 136 aa8.03□□□□□ -1.12
SEC13-204ENST00000397099 S100A6P06703 90 aa8.03□□□□□ -1.12
SEC13-204ENST00000397099 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
SEC13-204ENST00000397099 SLC25A34Q6PIV7 304 aa8.03□□□□□ -1.12
SEC13-204ENST00000397099 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
SEC13-204ENST00000397099 Q8NBF4 154 aa8.03□□□□□ -1.12
SEC13-204ENST00000397099 TPRXLQ17RH7 258 aa8.02□□□□□ -1.13
SEC13-204ENST00000397099 TTTY13Q9BZ97 58 aa8.02□□□□□ -1.13
SEC13-204ENST00000397099 TRBV7-6A0A0J9YX20 115 aa8.01□□□□□ -1.13
SEC13-204ENST00000397099 HSBP1L1C9JCN9 74 aa8.01□□□□□ -1.13
SEC13-204ENST00000397099 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
SEC13-204ENST00000397099 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
SEC13-204ENST00000397099 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
SEC13-204ENST00000397099 ATOH7Q8N100 152 aa8□□□□□ -1.13
SEC13-204ENST00000397099 HIST1H2BLQ99880 126 aa8□□□□□ -1.13
SEC13-204ENST00000397099 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
SEC13-204ENST00000397099 IGLV9-49A0A0B4J1Y8 123 aa7.99□□□□□ -1.13
SEC13-204ENST00000397099 ELOF1P60002 83 aaKnown RBP7.99□□□□□ -1.13
SEC13-204ENST00000397099 MOBPQ13875 183 aa7.99□□□□□ -1.13
SEC13-204ENST00000397099 COX7BP24311 80 aa7.98□□□□□ -1.13
SEC13-204ENST00000397099 TRAV13-2A0A0B4J235 113 aa7.97□□□□□ -1.13
SEC13-204ENST00000397099 A4D1N5 150 aa7.97□□□□□ -1.13
SEC13-204ENST00000397099 PCP2Q8IVA1 136 aa7.97□□□□□ -1.13
SEC13-204ENST00000397099 CDIP1Q9H305 208 aa7.97□□□□□ -1.13
SEC13-204ENST00000397099 SPRR1BP22528 89 aa7.96□□□□□ -1.14
SEC13-204ENST00000397099 C6orf99Q4VX62 202 aa7.96□□□□□ -1.14
SEC13-204ENST00000397099 A0A0U1RQV1 116 aa7.95□□□□□ -1.14
SEC13-204ENST00000397099 A0A1B0GWB2 263 aa7.95□□□□□ -1.14
SEC13-204ENST00000397099 A6NDN8 102 aa7.95□□□□□ -1.14
SEC13-204ENST00000397099 C9orf153Q5TBE3 101 aa7.95□□□□□ -1.14
SEC13-204ENST00000397099 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
SEC13-204ENST00000397099 SLC25A20O43772 301 aa7.94□□□□□ -1.14
SEC13-204ENST00000397099 NHP2Q9NX24 153 aaKnown RBP7.94□□□□□ -1.14
SEC13-204ENST00000397099 LAMTOR3Q9UHA4 124 aa7.94□□□□□ -1.14
SEC13-204ENST00000397099 MUC2Q02817 5179 aa7.94□□□□□ -1.14
SEC13-204ENST00000397099 ST20-AS1Q8NBB2 130 aa7.93□□□□□ -1.14
SEC13-204ENST00000397099 TEX49A0A1B0GTD5 131 aa7.91□□□□□ -1.14
SEC13-204ENST00000397099 TAL2Q16559 108 aa7.91□□□□□ -1.14
SEC13-204ENST00000397099 VAMP3Q15836 100 aa7.9□□□□□ -1.14
SEC13-204ENST00000397099 Q8N377 158 aa7.9□□□□□ -1.14
SEC13-204ENST00000397099 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
SEC13-204ENST00000397099 SCGB1D1O95968 90 aa7.89□□□□□ -1.15
SEC13-204ENST00000397099 CD164Q04900 197 aa7.87□□□□□ -1.15
SEC13-204ENST00000397099 IGLV5-48A0A075B6I7 105 aa7.86□□□□□ -1.15
SEC13-204ENST00000397099 SMIM11BQ8TCY0 68 aa7.86□□□□□ -1.15
SEC13-204ENST00000397099 PRO1933Q9H354 126 aa7.86□□□□□ -1.15
SEC13-204ENST00000397099 DLEU1O43261 78 aa7.85□□□□□ -1.15
SEC13-204ENST00000397099 KRTAP13-3Q3SY46 172 aa7.85□□□□□ -1.15
SEC13-204ENST00000397099 DEFB105AQ8NG35 78 aa7.85□□□□□ -1.15
SEC13-204ENST00000397099 MUC17Q685J3 4493 aa7.84□□□□□ -1.15
SEC13-204ENST00000397099 COX8AP10176 69 aa7.84□□□□□ -1.15
SEC13-204ENST00000397099 HIST1H4GQ99525 98 aa7.84□□□□□ -1.15
SEC13-204ENST00000397099 Q1RN00 199 aa7.82□□□□□ -1.16
SEC13-204ENST00000397099 H7C2G1 150 aa7.81□□□□□ -1.16
SEC13-204ENST00000397099 BVES-AS1Q5T3Y7 98 aa7.81□□□□□ -1.16
SEC13-204ENST00000397099 Q5XG85 94 aa7.8□□□□□ -1.16
SEC13-204ENST00000397099 hADV29S1A0JD25 119 aa7.79□□□□□ -1.16
SEC13-204ENST00000397099 LINC01547P58512 204 aaPredicted RBP7.79□□□□□ -1.16
SEC13-204ENST00000397099 SEC61BP60468 96 aaKnown RBP7.79□□□□□ -1.16
SEC13-204ENST00000397099 LINC00575Q6W349 94 aa7.79□□□□□ -1.16
SEC13-204ENST00000397099 SMIM29Q86T20 159 aa7.79□□□□□ -1.16
SEC13-204ENST00000397099 F8WEM9 126 aa7.78□□□□□ -1.16
SEC13-204ENST00000397099 SNCGO76070 127 aa7.78□□□□□ -1.16
SEC13-204ENST00000397099 PPDPFLQ8WWR9 84 aa7.78□□□□□ -1.16
SEC13-204ENST00000397099 HIGD1BQ9P298 99 aa7.78□□□□□ -1.16
SEC13-204ENST00000397099 ASB16-AS1Q495Z4 193 aa7.77□□□□□ -1.17
SEC13-204ENST00000397099 VAMP8Q9BV40 100 aa7.77□□□□□ -1.17
SEC13-204ENST00000397099 HRCT1Q6UXD1 115 aa7.76□□□□□ -1.17
SEC13-204ENST00000397099 SPATA45Q537H7 98 aa7.75□□□□□ -1.17
SEC13-204ENST00000397099 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.75□□□□□ -1.17
SEC13-204ENST00000397099 Q6JHZ5 121 aa7.74□□□□□ -1.17
SEC13-204ENST00000397099 Q6ZQY7 126 aa7.74□□□□□ -1.17
SEC13-204ENST00000397099 RAB37Q96AX2 223 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms