RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 KCNQ1DNQ9H478 68 aa11.39□□□□□ -0.59
MCF2L-208ENST00000397030 IGLV5-48A0A075B6I7 105 aa11.38□□□□□ -0.59
MCF2L-208ENST00000397030 TNP2Q05952 138 aa11.37□□□□□ -0.59
MCF2L-208ENST00000397030 PRO0628Q9UI54 55 aa11.37□□□□□ -0.59
MCF2L-208ENST00000397030 SMCPP49901 116 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-208ENST00000397030 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
MCF2L-208ENST00000397030 IGLV7-46A0A075B6I9 117 aa11.35□□□□□ -0.59
MCF2L-208ENST00000397030 UQCR11O14957 56 aa11.33□□□□□ -0.6
MCF2L-208ENST00000397030 MIR22HGQ0VDD5 57 aa11.32□□□□□ -0.6
MCF2L-208ENST00000397030 PRR15Q8IV56 129 aa11.31□□□□□ -0.6
MCF2L-208ENST00000397030 PRR26Q8N8Z3 221 aa11.29□□□□□ -0.6
MCF2L-208ENST00000397030 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
MCF2L-208ENST00000397030 LINC00612Q8N6U2 182 aa11.28□□□□□ -0.6
MCF2L-208ENST00000397030 Q8N377 158 aa11.28□□□□□ -0.6
MCF2L-208ENST00000397030 SPRR4Q96PI1 79 aa11.28□□□□□ -0.6
MCF2L-208ENST00000397030 PCSK5Q92824 1860 aa11.27□□□□□ -0.6
MCF2L-208ENST00000397030 A8MUN3 132 aa11.26□□□□□ -0.61
MCF2L-208ENST00000397030 CAMK2N1Q7Z7J9 78 aa11.25□□□□□ -0.61
MCF2L-208ENST00000397030 PRR34Q9NV39 138 aa11.25□□□□□ -0.61
MCF2L-208ENST00000397030 GIG44P09565 113 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-208ENST00000397030 LITAFQ99732 161 aa11.23□□□□□ -0.61
MCF2L-208ENST00000397030 A0A096LNT2 108 aa11.23□□□□□ -0.61
MCF2L-208ENST00000397030 ERC2-IT1O76042 136 aa11.23□□□□□ -0.61
MCF2L-208ENST00000397030 PRO0461Q9UI25 63 aa11.21□□□□□ -0.62
MCF2L-208ENST00000397030 TLN2Q9Y4G6 2542 aa11.17□□□□□ -0.62
MCF2L-208ENST00000397030 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
MCF2L-208ENST00000397030 CDC42SE1Q9NRR8 79 aa11.16□□□□□ -0.62
MCF2L-208ENST00000397030 KRTAP1-3Q8IUG1 177 aa11.16□□□□□ -0.62
MCF2L-208ENST00000397030 FAM104AQ969W3 186 aa11.16□□□□□ -0.62
MCF2L-208ENST00000397030 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.62
MCF2L-208ENST00000397030 CNBPP62633 177 aaKnown RBP11.15□□□□□ -0.63
MCF2L-208ENST00000397030 WDR87Q6ZQQ6 2873 aa11.13□□□□□ -0.63
MCF2L-208ENST00000397030 EIF4EBP3O60516 100 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-208ENST00000397030 ANKRD17O75179 2603 aaKnown RBP11.12□□□□□ -0.63
MCF2L-208ENST00000397030 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.1□□□□□ -0.63
MCF2L-208ENST00000397030 RPS28P62857 69 aaKnown RBP11.1□□□□□ -0.63
MCF2L-208ENST00000397030 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
MCF2L-208ENST00000397030 CHD8Q9HCK8 2581 aa11.04□□□□□ -0.64
MCF2L-208ENST00000397030 Q5VSD8 79 aa11.04□□□□□ -0.64
MCF2L-208ENST00000397030 USP9XQ93008 2570 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-208ENST00000397030 ANKRD11Q6UB99 2663 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-208ENST00000397030 LINC00483Q53H64 154 aa11.04□□□□□ -0.64
MCF2L-208ENST00000397030 KLK9Q2XQG4 91 aa11.02□□□□□ -0.64
MCF2L-208ENST00000397030 CENPFP49454 3210 aa11.02□□□□□ -0.65
MCF2L-208ENST00000397030 CYP4F30PQ9H0H9 118 aa11.01□□□□□ -0.65
MCF2L-208ENST00000397030 SETD2Q9BYW2 2564 aaPredicted RBP11□□□□□ -0.65
MCF2L-208ENST00000397030 S4R3F8 94 aa11□□□□□ -0.65
MCF2L-208ENST00000397030 LUZP6Q538Z0 58 aa10.99□□□□□ -0.65
MCF2L-208ENST00000397030 F8P00451 2351 aa10.98□□□□□ -0.65
MCF2L-208ENST00000397030 A0A1W2PNM2 257 aa10.97□□□□□ -0.65
MCF2L-208ENST00000397030 SPTBN4Q9H254 2564 aa10.92□□□□□ -0.66
MCF2L-208ENST00000397030 ACANP16112 2415 aa10.91□□□□□ -0.66
MCF2L-208ENST00000397030 POLQO75417 2590 aa10.91□□□□□ -0.66
MCF2L-208ENST00000397030 HRES1P13985 223 aa10.91□□□□□ -0.66
MCF2L-208ENST00000397030 CD164Q04900 197 aa10.9□□□□□ -0.66
MCF2L-208ENST00000397030 PKD1L2Q7Z442 2459 aa10.89□□□□□ -0.67
MCF2L-208ENST00000397030 FASNP49327 2511 aaKnown RBP10.88□□□□□ -0.67
MCF2L-208ENST00000397030 CSAG1Q6PB30 78 aa10.88□□□□□ -0.67
MCF2L-208ENST00000397030 MTORP42345 2549 aa10.86□□□□□ -0.67
MCF2L-208ENST00000397030 SEC61BP60468 96 aaKnown RBP10.86□□□□□ -0.67
MCF2L-208ENST00000397030 CEP295Q9C0D2 2601 aa10.85□□□□□ -0.67
MCF2L-208ENST00000397030 DNAH12Q6ZR08 3092 aa10.84□□□□□ -0.67
MCF2L-208ENST00000397030 PCNTO95613 3336 aa10.83□□□□□ -0.68
MCF2L-208ENST00000397030 A0A1B0GU33 70 aa10.82□□□□□ -0.68
MCF2L-208ENST00000397030 ZCCHC13Q8WW36 166 aaKnown RBP10.81□□□□□ -0.68
MCF2L-208ENST00000397030 R4GN34 69 aa10.79□□□□□ -0.68
MCF2L-208ENST00000397030 USP9YO00507 2555 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-208ENST00000397030 LCE6AA0A183 80 aa10.77□□□□□ -0.68
MCF2L-208ENST00000397030 FAM229BQ4G0N7 80 aa10.77□□□□□ -0.68
MCF2L-208ENST00000397030 PLAC8Q9NZF1 115 aa10.77□□□□□ -0.68
MCF2L-208ENST00000397030 Q1T7F1 81 aa10.77□□□□□ -0.69
MCF2L-208ENST00000397030 KLKP1Q107X0 134 aa10.73□□□□□ -0.69
MCF2L-208ENST00000397030 C5orf42Q9H799 3197 aa10.71□□□□□ -0.69
MCF2L-208ENST00000397030 KRTAP10-1P60331 282 aa10.7□□□□□ -0.7
MCF2L-208ENST00000397030 H7BZZ5 65 aa10.7□□□□□ -0.7
MCF2L-208ENST00000397030 SPANXA2-OT1Q8N9U9 137 aa10.69□□□□□ -0.7
MCF2L-208ENST00000397030 KRTAP10-2P60368 255 aa10.69□□□□□ -0.7
MCF2L-208ENST00000397030 PLAC4Q8WY50 150 aa10.68□□□□□ -0.7
MCF2L-208ENST00000397030 SPINK7P58062 85 aa10.67□□□□□ -0.7
MCF2L-208ENST00000397030 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
MCF2L-208ENST00000397030 KTN1-AS1Q86SY8 53 aa10.65□□□□□ -0.7
MCF2L-208ENST00000397030 CR1P17927 2039 aa10.64□□□□□ -0.71
MCF2L-208ENST00000397030 LCA10Q71F78 164 aa10.63□□□□□ -0.71
MCF2L-208ENST00000397030 M0QZ58 72 aa10.61□□□□□ -0.71
MCF2L-208ENST00000397030 WIPF1O43516 503 aa10.61□□□□□ -0.71
MCF2L-208ENST00000397030 DMAC1Q96GE9 116 aa10.59□□□□□ -0.71
MCF2L-208ENST00000397030 HECTD1Q9ULT8 2610 aa10.58□□□□□ -0.72
MCF2L-208ENST00000397030 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
MCF2L-208ENST00000397030 Q5W150 140 aa10.56□□□□□ -0.72
MCF2L-208ENST00000397030 OXTP01178 125 aa10.55□□□□□ -0.72
MCF2L-208ENST00000397030 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
MCF2L-208ENST00000397030 OCR1Q9BZK8 76 aa10.49□□□□□ -0.73
MCF2L-208ENST00000397030 MGAM2Q2M2H8 2515 aa10.48□□□□□ -0.73
MCF2L-208ENST00000397030 ADM2Q7Z4H4 148 aa10.48□□□□□ -0.73
MCF2L-208ENST00000397030 USP24Q9UPU5 2620 aa10.46□□□□□ -0.73
MCF2L-208ENST00000397030 H1FX-AS1Q4G0G2 97 aa10.46□□□□□ -0.73
MCF2L-208ENST00000397030 Q8NDZ9 215 aa10.42□□□□□ -0.74
MCF2L-208ENST00000397030 XIRP2A4UGR9 3374 aa10.42□□□□□ -0.74
MCF2L-208ENST00000397030 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
MCF2L-208ENST00000397030 CEP350Q5VT06 3117 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms