RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LELP1Q5T871 98 aa15.93■□□□□ 0.14
CSNK1E-203ENST00000396832 OCR1Q9BZK8 76 aa15.93■□□□□ 0.14
CSNK1E-203ENST00000396832 A0A0U1RQV1 116 aa15.93■□□□□ 0.14
CSNK1E-203ENST00000396832 GVQW2A0A096LPI5 108 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-203ENST00000396832 F8P00451 2351 aa15.91■□□□□ 0.14
CSNK1E-203ENST00000396832 WFDC10BQ8IUB3 73 aa15.91■□□□□ 0.14
CSNK1E-203ENST00000396832 FUSP35637 526 aaKnown RBP eCLIP15.9■□□□□ 0.14
CSNK1E-203ENST00000396832 APOC4P55056 127 aa15.9■□□□□ 0.14
CSNK1E-203ENST00000396832 CAMK2N2Q96S95 79 aa15.89■□□□□ 0.13
CSNK1E-203ENST00000396832 SPART-AS1P0CW21 52 aa15.88■□□□□ 0.13
CSNK1E-203ENST00000396832 PRR34Q9NV39 138 aa15.88■□□□□ 0.13
CSNK1E-203ENST00000396832 INAFM1C9JVW0 142 aa15.87■□□□□ 0.13
CSNK1E-203ENST00000396832 HIGD2AQ9BW72 106 aa15.87■□□□□ 0.13
CSNK1E-203ENST00000396832 TENM3Q9P273 2699 aa15.87■□□□□ 0.13
CSNK1E-203ENST00000396832 Q6ZTC4 211 aa15.87■□□□□ 0.13
CSNK1E-203ENST00000396832 ESRGQ1W209 222 aa15.86■□□□□ 0.13
CSNK1E-203ENST00000396832 VPREB1P12018 145 aa15.86■□□□□ 0.13
CSNK1E-203ENST00000396832 RETNQ9HD89 108 aa15.85■□□□□ 0.13
CSNK1E-203ENST00000396832 C3orf84H3BNL1 204 aa15.85■□□□□ 0.13
CSNK1E-203ENST00000396832 LINC00528Q8N1L1 170 aa15.84■□□□□ 0.13
CSNK1E-203ENST00000396832 Q6ZRU5 148 aa15.84■□□□□ 0.13
CSNK1E-203ENST00000396832 M0R378 163 aa15.81■□□□□ 0.12
CSNK1E-203ENST00000396832 ANK2Q01484 3957 aa15.81■□□□□ 0.12
CSNK1E-203ENST00000396832 DEFB105AQ8NG35 78 aa15.81■□□□□ 0.12
CSNK1E-203ENST00000396832 C1orf195Q5TG92 126 aa15.79■□□□□ 0.12
CSNK1E-203ENST00000396832 BAHCC1Q9P281 2608 aa15.76■□□□□ 0.11
CSNK1E-203ENST00000396832 FAM30AQ9NZY2 134 aa15.75■□□□□ 0.11
CSNK1E-203ENST00000396832 F8WDY8 70 aa15.74■□□□□ 0.11
CSNK1E-203ENST00000396832 KPRPQ5T749 579 aaPredicted RBP15.73■□□□□ 0.11
CSNK1E-203ENST00000396832 Q6ZRP5 223 aa15.73■□□□□ 0.11
CSNK1E-203ENST00000396832 SMIM29Q86T20 159 aa15.73■□□□□ 0.11
CSNK1E-203ENST00000396832 C15orf56Q8N910 161 aa15.72■□□□□ 0.11
CSNK1E-203ENST00000396832 EGFEM1PQ0D2K5 195 aa15.7■□□□□ 0.1
CSNK1E-203ENST00000396832 IGKV2D-24A0A075B6R9 120 aa15.7■□□□□ 0.1
CSNK1E-203ENST00000396832 LRCOL1A6NCL2 159 aa15.68■□□□□ 0.1
CSNK1E-203ENST00000396832 V9GYY9 64 aa15.68■□□□□ 0.1
CSNK1E-203ENST00000396832 STAB1Q9NY15 2570 aa15.67■□□□□ 0.1
CSNK1E-203ENST00000396832 Q8N377 158 aa15.67■□□□□ 0.1
CSNK1E-203ENST00000396832 hDV103S1A0JD37 113 aa15.67■□□□□ 0.1
CSNK1E-203ENST00000396832 KRTAP26-1Q6PEX3 210 aa15.65■□□□□ 0.1
CSNK1E-203ENST00000396832 NOTCH1P46531 2555 aa15.65■□□□□ 0.1
CSNK1E-203ENST00000396832 OXLD1Q5BKU9 147 aa15.64■□□□□ 0.09
CSNK1E-203ENST00000396832 IGLV5-48A0A075B6I7 105 aa15.64■□□□□ 0.09
CSNK1E-203ENST00000396832 RPL37AP8A6NKH3 93 aa15.64■□□□□ 0.09
CSNK1E-203ENST00000396832 SERTAD4-AS1Q5TG53 156 aa15.64■□□□□ 0.09
CSNK1E-203ENST00000396832 MAST4O15021 2626 aa15.63■□□□□ 0.09
CSNK1E-203ENST00000396832 LCE6AA0A183 80 aa15.61■□□□□ 0.09
CSNK1E-203ENST00000396832 FBN1P35555 2871 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-203ENST00000396832 C1orf64Q8NEQ6 169 aa15.61■□□□□ 0.09
CSNK1E-203ENST00000396832 A0A1W2PNM2 257 aa15.59■□□□□ 0.09
CSNK1E-203ENST00000396832 NKAPP1Q8N9T2 125 aa15.59■□□□□ 0.09
CSNK1E-203ENST00000396832 FAM168BA1KXE4 195 aa15.58■□□□□ 0.08
CSNK1E-203ENST00000396832 KCNQ1DNQ9H478 68 aa15.57■□□□□ 0.08
CSNK1E-203ENST00000396832 C7orf33Q8WU49 177 aa15.55■□□□□ 0.08
CSNK1E-203ENST00000396832 SYCNQ0VAF6 134 aa15.55■□□□□ 0.08
CSNK1E-203ENST00000396832 Q1T7F1 81 aa15.55■□□□□ 0.08
CSNK1E-203ENST00000396832 SEC61GP60059 68 aa15.54■□□□□ 0.08
CSNK1E-203ENST00000396832 ZCCHC13Q8WW36 166 aaKnown RBP15.54■□□□□ 0.08
CSNK1E-203ENST00000396832 A0A1B0GW54 56 aa15.53■□□□□ 0.08
CSNK1E-203ENST00000396832 C1orf137Q5JT78 98 aa15.53■□□□□ 0.08
CSNK1E-203ENST00000396832 ETDCA0A1B0GVM5 59 aa15.52■□□□□ 0.08
CSNK1E-203ENST00000396832 ST20-AS1Q8NBB2 130 aa15.52■□□□□ 0.08
CSNK1E-203ENST00000396832 DSCR10P59022 87 aa15.51■□□□□ 0.07
CSNK1E-203ENST00000396832 PRR15Q8IV56 129 aa15.51■□□□□ 0.07
CSNK1E-203ENST00000396832 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.49■□□□□ 0.07
CSNK1E-203ENST00000396832 COL6A5A8TX70 2615 aa15.49■□□□□ 0.07
CSNK1E-203ENST00000396832 K7EQZ3 153 aa15.49■□□□□ 0.07
CSNK1E-203ENST00000396832 CASC10Q5T4H9 136 aa15.48■□□□□ 0.07
CSNK1E-203ENST00000396832 Q8NBF4 154 aa15.48■□□□□ 0.07
CSNK1E-203ENST00000396832 PSPHP1O15172 72 aa15.47■□□□□ 0.07
CSNK1E-203ENST00000396832 KRTAP10-11P60412 298 aa15.47■□□□□ 0.07
CSNK1E-203ENST00000396832 PRR4Q16378 134 aa15.47■□□□□ 0.07
CSNK1E-203ENST00000396832 DHRS4-AS1Q9P1J3 65 aa15.47■□□□□ 0.07
CSNK1E-203ENST00000396832 CSMD3Q7Z407 3707 aa15.47■□□□□ 0.07
CSNK1E-203ENST00000396832 A0A0G2JQZ4 141 aa15.46■□□□□ 0.07
CSNK1E-203ENST00000396832 A0A1W2PNN7 141 aa15.46■□□□□ 0.07
CSNK1E-203ENST00000396832 TNP2Q05952 138 aa15.46■□□□□ 0.07
CSNK1E-203ENST00000396832 Q9BRP9 147 aa15.46■□□□□ 0.07
CSNK1E-203ENST00000396832 Q6ZRX8 168 aa15.45■□□□□ 0.06
CSNK1E-203ENST00000396832 DEFB131BA0A096LNP1 70 aa15.44■□□□□ 0.06
CSNK1E-203ENST00000396832 SPRR4Q96PI1 79 aa15.43■□□□□ 0.06
CSNK1E-203ENST00000396832 TRAV22A0A0B4J277 110 aa15.42■□□□□ 0.06
CSNK1E-203ENST00000396832 CYP4F30PQ9H0H9 118 aa15.4■□□□□ 0.06
CSNK1E-203ENST00000396832 PMAIP1Q13794 54 aa15.39■□□□□ 0.05
CSNK1E-203ENST00000396832 LINC01556Q5JQF7 62 aa15.38■□□□□ 0.05
CSNK1E-203ENST00000396832 HCG22E2RYF7 251 aa15.38■□□□□ 0.05
CSNK1E-203ENST00000396832 KRTAP4-16G5E9R7 235 aaPredicted RBP15.38■□□□□ 0.05
CSNK1E-203ENST00000396832 NBEAL1Q6ZS30 2694 aa15.38■□□□□ 0.05
CSNK1E-203ENST00000396832 SRRM2Q9UQ35 2752 aaKnown RBP15.38■□□□□ 0.05
CSNK1E-203ENST00000396832 PRB2P02812 416 aaPredicted RBP15.37■□□□□ 0.05
CSNK1E-203ENST00000396832 LYSTQ99698 3801 aa15.37■□□□□ 0.05
CSNK1E-203ENST00000396832 C11orf45Q8TAV5 145 aa15.36■□□□□ 0.05
CSNK1E-203ENST00000396832 DEFB116Q30KQ4 102 aa15.35■□□□□ 0.05
CSNK1E-203ENST00000396832 H3BNG1 76 aa15.34■□□□□ 0.05
CSNK1E-203ENST00000396832 PSCAO43653 123 aa15.34■□□□□ 0.05
CSNK1E-203ENST00000396832 UBE2BP63146 152 aa15.34■□□□□ 0.05
CSNK1E-203ENST00000396832 KRTAP7-1Q8IUC3 87 aa15.34■□□□□ 0.05
CSNK1E-203ENST00000396832 IGLV1-50A0A075B6I6 118 aa15.33■□□□□ 0.04
CSNK1E-203ENST00000396832 SPRR1AP35321 89 aa15.3■□□□□ 0.04
CSNK1E-203ENST00000396832 A8MUN3 132 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms