RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 PLA2G2DQ9UNK4 145 aa11.41□□□□□ -0.58
UBFD1-201ENST00000395878 Q8N377 158 aa11.41□□□□□ -0.58
UBFD1-201ENST00000395878 C8orf17Q9NRJ1 99 aa11.4□□□□□ -0.59
UBFD1-201ENST00000395878 KLKP1Q107X0 134 aa11.39□□□□□ -0.59
UBFD1-201ENST00000395878 IGLV8-61A0A075B6I0 122 aa11.39□□□□□ -0.59
UBFD1-201ENST00000395878 CYP4F30PQ9H0H9 118 aa11.39□□□□□ -0.59
UBFD1-201ENST00000395878 SSBP3-AS1Q7Z2R9 100 aa11.38□□□□□ -0.59
UBFD1-201ENST00000395878 ZNF861PO60384 105 aa11.37□□□□□ -0.59
UBFD1-201ENST00000395878 A8MUN3 132 aa11.35□□□□□ -0.59
UBFD1-201ENST00000395878 KRTAP10-3P60369 221 aa11.35□□□□□ -0.59
UBFD1-201ENST00000395878 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
UBFD1-201ENST00000395878 A0A1B0GVX0 72 aa11.35□□□□□ -0.59
UBFD1-201ENST00000395878 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
UBFD1-201ENST00000395878 C9orf163Q8N9P6 203 aa11.33□□□□□ -0.6
UBFD1-201ENST00000395878 DSCR10P59022 87 aa11.32□□□□□ -0.6
UBFD1-201ENST00000395878 A0A087WTM6 91 aa11.3□□□□□ -0.6
UBFD1-201ENST00000395878 UQCR11O14957 56 aa11.3□□□□□ -0.6
UBFD1-201ENST00000395878 PRRC2CQ9Y520 2896 aaKnown RBP11.3□□□□□ -0.6
UBFD1-201ENST00000395878 LINC00304Q8N9R0 145 aa11.28□□□□□ -0.6
UBFD1-201ENST00000395878 LINC00336Q6ZUF6 198 aa11.26□□□□□ -0.61
UBFD1-201ENST00000395878 H7BZZ5 65 aa11.25□□□□□ -0.61
UBFD1-201ENST00000395878 A0A0G2JQZ4 141 aa11.24□□□□□ -0.61
UBFD1-201ENST00000395878 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
UBFD1-201ENST00000395878 CNBPP62633 177 aaKnown RBP11.23□□□□□ -0.61
UBFD1-201ENST00000395878 OBSCN-AS1Q96MR7 158 aa11.22□□□□□ -0.61
UBFD1-201ENST00000395878 A0A1W2PNM2 257 aa11.21□□□□□ -0.61
UBFD1-201ENST00000395878 IGLV7-43P04211 117 aa11.2□□□□□ -0.62
UBFD1-201ENST00000395878 SPRR4Q96PI1 79 aa11.2□□□□□ -0.62
UBFD1-201ENST00000395878 KRTAP1-3Q8IUG1 177 aa11.18□□□□□ -0.62
UBFD1-201ENST00000395878 CASC10Q5T4H9 136 aa11.18□□□□□ -0.62
UBFD1-201ENST00000395878 MIR22HGQ0VDD5 57 aa11.18□□□□□ -0.62
UBFD1-201ENST00000395878 PSORS1C2Q9UIG4 136 aa11.18□□□□□ -0.62
UBFD1-201ENST00000395878 APLNQ9ULZ1 77 aa11.17□□□□□ -0.62
UBFD1-201ENST00000395878 IGLV5-37A0A075B6J1 123 aa11.17□□□□□ -0.62
UBFD1-201ENST00000395878 J3QL48 77 aa11.17□□□□□ -0.62
UBFD1-201ENST00000395878 SPINT4Q6UDR6 99 aa11.17□□□□□ -0.62
UBFD1-201ENST00000395878 DNAH12Q6ZR08 3092 aa11.16□□□□□ -0.62
UBFD1-201ENST00000395878 ZNF575Q86XF7 245 aa11.16□□□□□ -0.62
UBFD1-201ENST00000395878 ANAPC11Q9NYG5 84 aa11.16□□□□□ -0.62
UBFD1-201ENST00000395878 IGLV5-48A0A075B6I7 105 aa11.15□□□□□ -0.62
UBFD1-201ENST00000395878 USP24Q9UPU5 2620 aa11.15□□□□□ -0.63
UBFD1-201ENST00000395878 FLNBO75369 2602 aaKnown RBP11.13□□□□□ -0.63
UBFD1-201ENST00000395878 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
UBFD1-201ENST00000395878 SPANXA2-OT1Q8N9U9 137 aa11.13□□□□□ -0.63
UBFD1-201ENST00000395878 KRTAP1-1Q07627 177 aa11.12□□□□□ -0.63
UBFD1-201ENST00000395878 MGAM2Q2M2H8 2515 aa11.11□□□□□ -0.63
UBFD1-201ENST00000395878 HECTD1Q9ULT8 2610 aa11.11□□□□□ -0.63
UBFD1-201ENST00000395878 COX6B2Q6YFQ2 88 aa11.09□□□□□ -0.63
UBFD1-201ENST00000395878 CEP350Q5VT06 3117 aa11.08□□□□□ -0.64
UBFD1-201ENST00000395878 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
UBFD1-201ENST00000395878 CRIPTQ9P021 101 aa11.06□□□□□ -0.64
UBFD1-201ENST00000395878 PCNTO95613 3336 aa11.05□□□□□ -0.64
UBFD1-201ENST00000395878 FAM104AQ969W3 186 aa11.02□□□□□ -0.65
UBFD1-201ENST00000395878 OCR1Q9BZK8 76 aa10.99□□□□□ -0.65
UBFD1-201ENST00000395878 A0A0C4DFX4 3053 aa10.98□□□□□ -0.65
UBFD1-201ENST00000395878 CD164Q04900 197 aa10.97□□□□□ -0.65
UBFD1-201ENST00000395878 RBM12B-AS1Q9P1G2 102 aa10.96□□□□□ -0.65
UBFD1-201ENST00000395878 KTN1-AS1Q86SY8 53 aa10.95□□□□□ -0.66
UBFD1-201ENST00000395878 Q8N1X5 172 aa10.94□□□□□ -0.66
UBFD1-201ENST00000395878 FLNAP21333 2647 aaKnown RBP10.92□□□□□ -0.66
UBFD1-201ENST00000395878 CDC42SE1Q9NRR8 79 aa10.92□□□□□ -0.66
UBFD1-201ENST00000395878 UTRNP46939 3433 aa10.91□□□□□ -0.66
UBFD1-201ENST00000395878 BPTFQ12830 3046 aa10.9□□□□□ -0.66
UBFD1-201ENST00000395878 LCA10Q71F78 164 aa10.89□□□□□ -0.67
UBFD1-201ENST00000395878 WIPF1O43516 503 aa10.88□□□□□ -0.67
UBFD1-201ENST00000395878 CR1P17927 2039 aa10.87□□□□□ -0.67
UBFD1-201ENST00000395878 TNP2Q05952 138 aa10.86□□□□□ -0.67
UBFD1-201ENST00000395878 Q1T7F1 81 aa10.86□□□□□ -0.67
UBFD1-201ENST00000395878 PRR26Q8N8Z3 221 aa10.84□□□□□ -0.67
UBFD1-201ENST00000395878 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.84□□□□□ -0.67
UBFD1-201ENST00000395878 IGLV7-46A0A075B6I9 117 aa10.83□□□□□ -0.68
UBFD1-201ENST00000395878 ITPR3Q14573 2671 aa10.83□□□□□ -0.68
UBFD1-201ENST00000395878 A0A0D9SG42 100 aa10.82□□□□□ -0.68
UBFD1-201ENST00000395878 ATRQ13535 2644 aa10.82□□□□□ -0.68
UBFD1-201ENST00000395878 MAST4O15021 2626 aa10.79□□□□□ -0.68
UBFD1-201ENST00000395878 FAM229BQ4G0N7 80 aa10.79□□□□□ -0.68
UBFD1-201ENST00000395878 LINC01554Q52M75 96 aa10.79□□□□□ -0.68
UBFD1-201ENST00000395878 SPRR1AP35321 89 aa10.78□□□□□ -0.68
UBFD1-201ENST00000395878 CYSTM1Q9H1C7 97 aa10.77□□□□□ -0.68
UBFD1-201ENST00000395878 HRES1P13985 223 aa10.76□□□□□ -0.69
UBFD1-201ENST00000395878 MMP24-AS1A0A0U1RRL7 71 aa10.74□□□□□ -0.69
UBFD1-201ENST00000395878 Q8NDZ9 215 aa10.74□□□□□ -0.69
UBFD1-201ENST00000395878 Q5XG85 94 aa10.74□□□□□ -0.69
UBFD1-201ENST00000395878 PLAC8Q9NZF1 115 aa10.74□□□□□ -0.69
UBFD1-201ENST00000395878 HELZ2Q9BYK8 2649 aaKnown RBP10.74□□□□□ -0.69
UBFD1-201ENST00000395878 Q6ZSA8 131 aa10.71□□□□□ -0.69
UBFD1-201ENST00000395878 Q75L30 129 aa10.7□□□□□ -0.7
UBFD1-201ENST00000395878 SPRR1BP22528 89 aa10.69□□□□□ -0.7
UBFD1-201ENST00000395878 A0A1B0GU33 70 aa10.68□□□□□ -0.7
UBFD1-201ENST00000395878 C5orf42Q9H799 3197 aa10.66□□□□□ -0.7
UBFD1-201ENST00000395878 CFAP54Q96N23 3096 aa10.66□□□□□ -0.7
UBFD1-201ENST00000395878 LINC01558Q9Y6Z2 57 aa10.65□□□□□ -0.7
UBFD1-201ENST00000395878 ZCCHC13Q8WW36 166 aaKnown RBP10.65□□□□□ -0.71
UBFD1-201ENST00000395878 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
UBFD1-201ENST00000395878 LINC00472Q9H8W2 130 aa10.63□□□□□ -0.71
UBFD1-201ENST00000395878 Q8N9P0 234 aaPredicted RBP10.62□□□□□ -0.71
UBFD1-201ENST00000395878 CFAP46Q8IYW2 2715 aa10.61□□□□□ -0.71
UBFD1-201ENST00000395878 Q5W150 140 aa10.55□□□□□ -0.72
UBFD1-201ENST00000395878 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
UBFD1-201ENST00000395878 KRTAP26-1Q6PEX3 210 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms