RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 LINC01006Q8NI28 216 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 ZCCHC13Q8WW36 166 aaKnown RBP6.05□□□□□ -1.44
MSH5-205ENST00000395853 LINC00467Q9BRT7 94 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 IGHV3OR16-12A0A075B7B8 117 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 Q8N9L7 120 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 COX7B2Q8TF08 81 aa6.05□□□□□ -1.44
MSH5-205ENST00000395853 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
MSH5-205ENST00000395853 C18orf65Q6ZTR6 163 aa6.04□□□□□ -1.44
MSH5-205ENST00000395853 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
MSH5-205ENST00000395853 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
MSH5-205ENST00000395853 PRM2P04554 102 aa6.03□□□□□ -1.44
MSH5-205ENST00000395853 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
MSH5-205ENST00000395853 MUC7Q8TAX7 377 aa6.03□□□□□ -1.44
MSH5-205ENST00000395853 IGHV3-16A0A0C4DH30 117 aa6.03□□□□□ -1.44
MSH5-205ENST00000395853 NDUFB1O75438 58 aa6.02□□□□□ -1.45
MSH5-205ENST00000395853 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
MSH5-205ENST00000395853 CMYA5Q8N3K9 4069 aa6.02□□□□□ -1.45
MSH5-205ENST00000395853 DEFB136Q30KP8 78 aa6.02□□□□□ -1.45
MSH5-205ENST00000395853 H0Y9J4 135 aa6.01□□□□□ -1.45
MSH5-205ENST00000395853 C3orf84H3BNL1 204 aa6.01□□□□□ -1.45
MSH5-205ENST00000395853 KPRPQ5T749 579 aaPredicted RBP6.01□□□□□ -1.45
MSH5-205ENST00000395853 VWFP04275 2813 aa6.01□□□□□ -1.45
MSH5-205ENST00000395853 IGLV4-60A0A075B6I1 120 aa6.01□□□□□ -1.45
MSH5-205ENST00000395853 ELOF1P60002 83 aaKnown RBP6.01□□□□□ -1.45
MSH5-205ENST00000395853 B9D2Q9BPU9 175 aa6.01□□□□□ -1.45
MSH5-205ENST00000395853 CELA1Q9UNI1 258 aa6.01□□□□□ -1.45
MSH5-205ENST00000395853 SLURP1P55000 103 aa6□□□□□ -1.45
MSH5-205ENST00000395853 IGKV3-20P01619 116 aa6□□□□□ -1.45
MSH5-205ENST00000395853 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
MSH5-205ENST00000395853 K7EQD1 137 aa5.99□□□□□ -1.45
MSH5-205ENST00000395853 PROK1P58294 105 aa5.99□□□□□ -1.45
MSH5-205ENST00000395853 ZNF706Q9Y5V0 76 aaPredicted RBP5.99□□□□□ -1.45
MSH5-205ENST00000395853 WNK1Q9H4A3 2382 aa5.99□□□□□ -1.45
MSH5-205ENST00000395853 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
MSH5-205ENST00000395853 SMIM29Q86T20 159 aa5.98□□□□□ -1.45
MSH5-205ENST00000395853 LINC00612Q8N6U2 182 aa5.98□□□□□ -1.45
MSH5-205ENST00000395853 IGHV3-73A0A0B4J1V6 119 aa5.98□□□□□ -1.45
MSH5-205ENST00000395853 H3BQ85 93 aa5.98□□□□□ -1.45
MSH5-205ENST00000395853 KRTAP10-3P60369 221 aa5.98□□□□□ -1.45
MSH5-205ENST00000395853 NOTCH1P46531 2555 aa5.98□□□□□ -1.45
MSH5-205ENST00000395853 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
MSH5-205ENST00000395853 TOMM7Q9P0U1 55 aa5.97□□□□□ -1.45
MSH5-205ENST00000395853 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.97□□□□□ -1.45
MSH5-205ENST00000395853 TRGV2A0A075B6R0 118 aa5.97□□□□□ -1.45
MSH5-205ENST00000395853 IGHV3-53P01767 116 aa5.97□□□□□ -1.45
MSH5-205ENST00000395853 Q9BRP9 147 aa5.97□□□□□ -1.45
MSH5-205ENST00000395853 SPINK13Q1W4C9 94 aa5.96□□□□□ -1.46
MSH5-205ENST00000395853 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
MSH5-205ENST00000395853 C6orf99Q4VX62 202 aa5.96□□□□□ -1.46
MSH5-205ENST00000395853 DEFB114Q30KQ6 69 aa5.95□□□□□ -1.46
MSH5-205ENST00000395853 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
MSH5-205ENST00000395853 C4orf3Q8WVX3 66 aa5.95□□□□□ -1.46
MSH5-205ENST00000395853 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
MSH5-205ENST00000395853 A0A0A0MQY5 61 aa5.94□□□□□ -1.46
MSH5-205ENST00000395853 DEFB131AP59861 70 aa5.94□□□□□ -1.46
MSH5-205ENST00000395853 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
MSH5-205ENST00000395853 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
MSH5-205ENST00000395853 COX7BP24311 80 aa5.93□□□□□ -1.46
MSH5-205ENST00000395853 Q6ZQY7 126 aa5.92□□□□□ -1.46
MSH5-205ENST00000395853 J3QL48 77 aa5.92□□□□□ -1.46
MSH5-205ENST00000395853 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
MSH5-205ENST00000395853 ASB16-AS1Q495Z4 193 aa5.91□□□□□ -1.46
MSH5-205ENST00000395853 HTN1P15515 57 aa5.91□□□□□ -1.46
MSH5-205ENST00000395853 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
MSH5-205ENST00000395853 ST20-AS1Q8NBB2 130 aa5.9□□□□□ -1.46
MSH5-205ENST00000395853 LINC00476Q8WZB0 136 aa5.9□□□□□ -1.46
MSH5-205ENST00000395853 Q6ZSN1 163 aa5.9□□□□□ -1.46
MSH5-205ENST00000395853 MAP6D1Q9H9H5 199 aa5.9□□□□□ -1.46
MSH5-205ENST00000395853 WFDC10AQ9H1F0 79 aa5.9□□□□□ -1.47
MSH5-205ENST00000395853 A8MTW9 85 aa5.89□□□□□ -1.47
MSH5-205ENST00000395853 Q8NAQ8 132 aa5.89□□□□□ -1.47
MSH5-205ENST00000395853 HIGD2BQ4VC39 106 aa5.88□□□□□ -1.47
MSH5-205ENST00000395853 WWC2-AS2Q96NR7 200 aa5.88□□□□□ -1.47
MSH5-205ENST00000395853 KMT2CQ8NEZ4 4911 aaKnown RBP5.88□□□□□ -1.47
MSH5-205ENST00000395853 SPINK7P58062 85 aa5.87□□□□□ -1.47
MSH5-205ENST00000395853 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.87□□□□□ -1.47
MSH5-205ENST00000395853 ODF3L2Q3SX64 289 aa5.87□□□□□ -1.47
MSH5-205ENST00000395853 LINC00528Q8N1L1 170 aa5.87□□□□□ -1.47
MSH5-205ENST00000395853 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
MSH5-205ENST00000395853 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
MSH5-205ENST00000395853 NBEAL2Q6ZNJ1 2754 aa5.86□□□□□ -1.47
MSH5-205ENST00000395853 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
MSH5-205ENST00000395853 NOTCH3Q9UM47 2321 aa5.86□□□□□ -1.47
MSH5-205ENST00000395853 A0A087X002 238 aa5.85□□□□□ -1.47
MSH5-205ENST00000395853 SPAG11BQ08648 103 aa5.85□□□□□ -1.47
MSH5-205ENST00000395853 COA5Q86WW8 74 aa5.84□□□□□ -1.47
MSH5-205ENST00000395853 KCNQ1DNQ9H478 68 aa5.84□□□□□ -1.47
MSH5-205ENST00000395853 PLAC8Q9NZF1 115 aa5.84□□□□□ -1.47
MSH5-205ENST00000395853 DNAH3Q8TD57 4116 aa5.84□□□□□ -1.47
MSH5-205ENST00000395853 RYR3Q15413 4870 aa5.84□□□□□ -1.47
MSH5-205ENST00000395853 K7EIL1 84 aa5.83□□□□□ -1.48
MSH5-205ENST00000395853 IGLV1-51P01701 117 aa5.83□□□□□ -1.48
MSH5-205ENST00000395853 IGHV3OR16-9A0A0B4J2B5 98 aa5.83□□□□□ -1.48
MSH5-205ENST00000395853 INSP01308 110 aa5.83□□□□□ -1.48
MSH5-205ENST00000395853 CNBPP62633 177 aaKnown RBP5.82□□□□□ -1.48
MSH5-205ENST00000395853 SPAG11AQ6PDA7 123 aa5.82□□□□□ -1.48
MSH5-205ENST00000395853 IGHV4-30-4P0DP06 118 aa5.81□□□□□ -1.48
MSH5-205ENST00000395853 EGFEM1PQ0D2K5 195 aa5.81□□□□□ -1.48
MSH5-205ENST00000395853 RTL8CO15255 209 aa5.81□□□□□ -1.48
MSH5-205ENST00000395853 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms