RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
SNCA-205ENST00000394991 E9PLD3 99 aa8.76□□□□□ -1.01
SNCA-205ENST00000394991 C3orf79P0CE67 100 aa8.76□□□□□ -1.01
SNCA-205ENST00000394991 S100A1P23297 94 aa8.76□□□□□ -1.01
SNCA-205ENST00000394991 KRTDAPP60985 99 aa8.76□□□□□ -1.01
SNCA-205ENST00000394991 LINC01545Q5VT33 79 aa8.76□□□□□ -1.01
SNCA-205ENST00000394991 ZNF706Q9Y5V0 76 aaPredicted RBP8.76□□□□□ -1.01
SNCA-205ENST00000394991 Q8N377 158 aa8.75□□□□□ -1.01
SNCA-205ENST00000394991 CFC1BP0CG36 223 aa8.73□□□□□ -1.01
SNCA-205ENST00000394991 MIEN1Q9BRT3 115 aa8.73□□□□□ -1.01
SNCA-205ENST00000394991 A0A0J9YXY3 114 aa8.72□□□□□ -1.01
SNCA-205ENST00000394991 NPC2P61916 151 aa8.72□□□□□ -1.01
SNCA-205ENST00000394991 LINC00483Q53H64 154 aa8.71□□□□□ -1.02
SNCA-205ENST00000394991 SMCR5Q8TEV8 140 aa8.71□□□□□ -1.02
SNCA-205ENST00000394991 LOC107984156A0A0G2JMH3 177 aa8.7□□□□□ -1.02
SNCA-205ENST00000394991 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
SNCA-205ENST00000394991 C20orf202A1L168 122 aa8.7□□□□□ -1.02
SNCA-205ENST00000394991 PRYO14603 147 aa8.7□□□□□ -1.02
SNCA-205ENST00000394991 KRTAP10-6P60371 365 aaPredicted RBP8.7□□□□□ -1.02
SNCA-205ENST00000394991 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
SNCA-205ENST00000394991 ARL17AQ8IVW1 177 aa8.7□□□□□ -1.02
SNCA-205ENST00000394991 MOBPQ13875 183 aa8.69□□□□□ -1.02
SNCA-205ENST00000394991 ADAMTSL4-AS1Q5T5F5 129 aa8.69□□□□□ -1.02
SNCA-205ENST00000394991 ZNF815PA8K554 130 aa8.68□□□□□ -1.02
SNCA-205ENST00000394991 SPRR1AP35321 89 aa8.68□□□□□ -1.02
SNCA-205ENST00000394991 S100A12P80511 92 aa8.68□□□□□ -1.02
SNCA-205ENST00000394991 KCNQ1DNQ9H478 68 aa8.68□□□□□ -1.02
SNCA-205ENST00000394991 ETDCA0A1B0GVM5 59 aa8.67□□□□□ -1.02
SNCA-205ENST00000394991 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
SNCA-205ENST00000394991 SLC25A20O43772 301 aa8.67□□□□□ -1.02
SNCA-205ENST00000394991 DDTP30046 118 aa8.67□□□□□ -1.02
SNCA-205ENST00000394991 TTTY13Q9BZ97 58 aa8.67□□□□□ -1.02
SNCA-205ENST00000394991 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
SNCA-205ENST00000394991 IGLV9-49A0A0B4J1Y8 123 aa8.66□□□□□ -1.02
SNCA-205ENST00000394991 TRBV10-2A0A0K0K1G8 114 aa8.66□□□□□ -1.02
SNCA-205ENST00000394991 S100A7L2Q5SY68 101 aa8.66□□□□□ -1.02
SNCA-205ENST00000394991 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
SNCA-205ENST00000394991 ATOH7Q8N100 152 aa8.66□□□□□ -1.02
SNCA-205ENST00000394991 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
SNCA-205ENST00000394991 NDUFC2O95298 119 aa8.65□□□□□ -1.02
SNCA-205ENST00000394991 S100A2P29034 98 aa8.65□□□□□ -1.02
SNCA-205ENST00000394991 PCOTHQ58A44 107 aa8.65□□□□□ -1.02
SNCA-205ENST00000394991 GAGE2AQ6NT46 116 aa8.65□□□□□ -1.02
SNCA-205ENST00000394991 SSBP3-AS1Q7Z2R9 100 aa8.64□□□□□ -1.03
SNCA-205ENST00000394991 TIMM17BO60830 172 aa8.63□□□□□ -1.03
SNCA-205ENST00000394991 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
SNCA-205ENST00000394991 S100A6P06703 90 aa8.63□□□□□ -1.03
SNCA-205ENST00000394991 ANKRD39Q53RE8 183 aa8.63□□□□□ -1.03
SNCA-205ENST00000394991 HIST3H2BBQ8N257 126 aa8.63□□□□□ -1.03
SNCA-205ENST00000394991 LITAFQ99732 161 aa8.63□□□□□ -1.03
SNCA-205ENST00000394991 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
SNCA-205ENST00000394991 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
SNCA-205ENST00000394991 AKR1D1P51857 326 aa8.61□□□□□ -1.03
SNCA-205ENST00000394991 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
SNCA-205ENST00000394991 HIST1H2BLQ99880 126 aa8.61□□□□□ -1.03
SNCA-205ENST00000394991 IGLV6-57P01721 117 aa8.6□□□□□ -1.03
SNCA-205ENST00000394991 TRAV23DV6A0A075B6W5 121 aa8.59□□□□□ -1.03
SNCA-205ENST00000394991 A6NJY4 79 aa8.59□□□□□ -1.03
SNCA-205ENST00000394991 B5MCH6 92 aa8.59□□□□□ -1.03
SNCA-205ENST00000394991 OR13C6PQ8NH95 151 aa8.59□□□□□ -1.03
SNCA-205ENST00000394991 SPANXCQ9NY87 97 aa8.59□□□□□ -1.03
SNCA-205ENST00000394991 PCP2Q8IVA1 136 aa8.58□□□□□ -1.04
SNCA-205ENST00000394991 KRTAP9-7A8MTY7 169 aa8.57□□□□□ -1.04
SNCA-205ENST00000394991 SNRPEP62304 92 aaKnown RBP8.57□□□□□ -1.04
SNCA-205ENST00000394991 Q9BRP9 147 aa8.57□□□□□ -1.04
SNCA-205ENST00000394991 FLGP20930 4061 aaPredicted RBP8.56□□□□□ -1.04
SNCA-205ENST00000394991 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
SNCA-205ENST00000394991 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
SNCA-205ENST00000394991 Q6ZRX8 168 aa8.55□□□□□ -1.04
SNCA-205ENST00000394991 SPANXDQ9BXN6 97 aa8.55□□□□□ -1.04
SNCA-205ENST00000394991 CBY1Q9Y3M2 126 aa8.55□□□□□ -1.04
SNCA-205ENST00000394991 HSBP1L1C9JCN9 74 aa8.54□□□□□ -1.04
SNCA-205ENST00000394991 M0R2T5 61 aa8.54□□□□□ -1.04
SNCA-205ENST00000394991 C9orf92A6NGG3 77 aa8.53□□□□□ -1.04
SNCA-205ENST00000394991 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
SNCA-205ENST00000394991 JOSD1Q15040 202 aaPredicted RBP8.53□□□□□ -1.04
SNCA-205ENST00000394991 C9orf153Q5TBE3 101 aa8.53□□□□□ -1.04
SNCA-205ENST00000394991 LINC00518Q8N0U6 118 aa8.53□□□□□ -1.04
SNCA-205ENST00000394991 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
SNCA-205ENST00000394991 SCGB1D1O95968 90 aa8.51□□□□□ -1.05
SNCA-205ENST00000394991 IFITM1P13164 125 aa8.51□□□□□ -1.05
SNCA-205ENST00000394991 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
SNCA-205ENST00000394991 Q6ZVH6 145 aa8.5□□□□□ -1.05
SNCA-205ENST00000394991 C5orf52A6NGY3 159 aa8.49□□□□□ -1.05
SNCA-205ENST00000394991 A6NDN8 102 aa8.48□□□□□ -1.05
SNCA-205ENST00000394991 COX7BP24311 80 aa8.46□□□□□ -1.06
SNCA-205ENST00000394991 C6orf99Q4VX62 202 aa8.46□□□□□ -1.06
SNCA-205ENST00000394991 ST20-AS1Q8NBB2 130 aa8.46□□□□□ -1.06
SNCA-205ENST00000394991 HRCT1Q6UXD1 115 aa8.44□□□□□ -1.06
SNCA-205ENST00000394991 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
SNCA-205ENST00000394991 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
SNCA-205ENST00000394991 DHRS4-AS1Q9P1J3 65 aa8.44□□□□□ -1.06
SNCA-205ENST00000394991 ELOF1P60002 83 aaKnown RBP8.42□□□□□ -1.06
SNCA-205ENST00000394991 TRAV13-2A0A0B4J235 113 aa8.41□□□□□ -1.06
SNCA-205ENST00000394991 TRBV7-6A0A0J9YX20 115 aa8.39□□□□□ -1.07
SNCA-205ENST00000394991 A0A1B0GWB2 263 aa8.39□□□□□ -1.07
SNCA-205ENST00000394991 A4D1N5 150 aa8.38□□□□□ -1.07
SNCA-205ENST00000394991 COX8AP10176 69 aa8.38□□□□□ -1.07
SNCA-205ENST00000394991 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
SNCA-205ENST00000394991 TAL2Q16559 108 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms